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Amjad Askary

Title(s)Assistant Professor, Molecular, Cell and Developmental Biology
SchoolCollege of Letters and Science
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Regenerative base editing enables deep lineage recording. bioRxiv. 2026 Feb 07. Chadly D, Hadas R, Klock L, Yue J, Horns F, Askary A, Granados A, Bouckaert R, Lois C, Cai L, Elowitz MB. PMID: 41676548; PMCID: PMC12889630.
      View in: PubMed   Mentions:
    2. SMORE: spatial motifs reveal patterns in cellular architecture of complex tissues. Genome Biol. 2025 Jan 03; 26(1):3. Samadi Z, Hao K, Askary A. PMID: 39754206; PMCID: PMC11697875.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    3. The lives of cells, recorded. Nat Rev Genet. 2025 Mar; 26(3):203-222. Askary A, Chen W, Choi J, Du LY, Elowitz MB, Gagnon JA, Schier AF, Seidel S, Shendure J, Stadler T, Tran M. PMID: 39587306; PMCID: PMC12184736.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimals
    4. Reconstructing signaling history of single cells with imaging-based molecular recording. bioRxiv. 2024 Oct 12. Hao K, Barrett M, Samadi Z, Zarezadeh A, McGrath Y, Askary A. PMID: 39416000; PMCID: PMC11482953.
      View in: PubMed   Mentions:
    5. Spatial motifs reveal patterns in cellular architecture of complex tissues. bioRxiv. 2024 Apr 11. Samadi Z, Askary A. PMID: 38645046; PMCID: PMC11030378.
      View in: PubMed   Mentions:
    6. Lineage motifs as developmental modules for control of cell type proportions. Dev Cell. 2024 03 25; 59(6):812-826.e3. Tran M, Askary A, Elowitz MB. PMID: 38359830.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    7. Lineage motifs: developmental modules for control of cell type proportions. bioRxiv. 2023 Jun 07. Tran M, Askary A, Elowitz MB. PMID: 37333085; PMCID: PMC10274800.
      View in: PubMed   Mentions:
    8. osr1 couples intermediate mesoderm cell fate with temporal dynamics of vessel progenitor cell differentiation. Development. 2021 08 01; 148(15). Perens EA, Diaz JT, Quesnel A, Askary A, Crump JG, Yelon D. PMID: 34338289; PMCID: PMC8380454.
      View in: PubMed   Mentions: 8     Fields:    Translation:Animals
    9. Publisher Correction: In situ readout of DNA barcodes and single base edits facilitated by in vitro transcription. Nat Biotechnol. 2020 Feb; 38(2):245. Askary A, Sanchez-Guardado L, Linton JM, Chadly DM, Budde MW, Cai L, Lois C, Elowitz MB. PMID: 31988471.
      View in: PubMed   Mentions: 1     Fields:    
    10. In situ readout of DNA barcodes and single base edits facilitated by in vitro transcription. Nat Biotechnol. 2020 01; 38(1):66-75. Askary A, Sanchez-Guardado L, Linton JM, Chadly DM, Budde MW, Cai L, Lois C, Elowitz MB. PMID: 31740838; PMCID: PMC6954335.
      View in: PubMed   Mentions: 49     Fields:    Translation:HumansAnimalsCells
    11. Genome-wide analysis of facial skeletal regionalization in zebrafish. Development. 2017 08 15; 144(16):2994-3005. Askary A, Xu P, Barske L, Bay M, Bump P, Balczerski B, Bonaguidi MA, Crump JG. PMID: 28705894; PMCID: PMC5592815.
      View in: PubMed   Mentions: 36     Fields:    Translation:Animals
    12. Building and maintaining joints by exquisite local control of cell fate. Wiley Interdiscip Rev Dev Biol. 2017 01; 6(1). Smeeton J, Askary A, Crump JG. PMID: 27581688; PMCID: PMC5877473.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimals
    13. Ancient origin of lubricated joints in bony vertebrates. Elife. 2016 07 19; 5. Askary A, Smeeton J, Paul S, Schindler S, Braasch I, Ellis NA, Postlethwait J, Miller CT, Crump JG. PMID: 27434666; PMCID: PMC4951194.
      View in: PubMed   Mentions: 48     Fields:    Translation:Animals
    14. Competition between Jagged-Notch and Endothelin1 Signaling Selectively Restricts Cartilage Formation in the Zebrafish Upper Face. PLoS Genet. 2016 Apr; 12(4):e1005967. Barske L, Askary A, Zuniga E, Balczerski B, Bump P, Nichols JT, Crump JG. PMID: 27058748; PMCID: PMC4825933.
      View in: PubMed   Mentions: 47     Fields:    Translation:AnimalsCells
    15. Iroquois Proteins Promote Skeletal Joint Formation by Maintaining Chondrocytes in an Immature State. Dev Cell. 2015 Nov 09; 35(3):358-65. Askary A, Mork L, Paul S, He X, Izuhara AK, Gopalakrishnan S, Ichida JK, McMahon AP, Dabizljevic S, Dale R, Mariani FV, Crump JG. PMID: 26555055; PMCID: PMC4758819.
      View in: PubMed   Mentions: 28     Fields:    Translation:AnimalsCells
    16. Modeling of the RAG reaction mechanism. Cell Rep. 2014 Apr 24; 7(2):307-315. Askary A, Shimazaki N, Bayat N, Lieber MR. PMID: 24703851; PMCID: PMC4010234.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    17. Mechanistic basis for RAG discrimination between recombination sites and the off-target sites of human lymphomas. Mol Cell Biol. 2012 Jan; 32(2):365-75. Shimazaki N, Askary A, Swanson PC, Lieber MR. PMID: 22064481; PMCID: PMC3255787.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimalsCells
    18. N4: a precise and highly sensitive promoter predictor using neural network fed by nearest neighbors. Genes Genet Syst. 2009 Dec; 84(6):425-30. Askary A, Masoudi-Nejad A, Sharafi R, Mizbani A, Parizi SN, Purmasjedi M. PMID: 20228580.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
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