Paul Richard Allyn

Title(s)HS Associate Clinical Professor, Medicine
SchoolMedicine
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Cefepime resistance with preserved ceftriaxone susceptibility in Proteus mirabilis osteomyelitis associated with blaOXA-1 gene amplification: Two case reports with genomic analysis. IDCases. 2026; 45:e02654. Lima A, Collins M, Jaramillo M, Gonzalez-Ferrer S, Sircar A, Allyn PR, Yang S. PMID: 42389002; PMCID: PMC13318549.
      View in: PubMed   Mentions:
    2. Fosmanogepix treatment for coccidioidomycosis under an expanded access program. Clin Infect Dis. 2026 Apr 21. Cohen SH, Allyn P, Chow FC, Rathe J, Nanayakkara DD, Hutfles G, Vijayan T, Smith EA, Saling CF, Ilges D, Schlamm HT, Thompson GR. PMID: 42015519.
      View in: PubMed   Mentions:    Fields:    
    3. Effect of different management strategies on outcomes in subarachnoid neurocysticercosis: a descriptive, multicentre, retrospective cohort study in the USA. EClinicalMedicine. 2026 Apr; 94:103861. Guzmán JJ, Duffey MM, Weatherhead J, Clark EH, Herrick J, Amusu S, Chow FC, Allyn PR, Wald-Dickler N, Rodriguez JM, Bowman NM, Hatlen TJ, Martin D, Larsen T, Cervantes-Arslanian AM, Coyle C, White AC, Welford E, Cowell AN, Jenks JD, Henao-Martinez AF, Franco-Paredes C, Mathisen G, Lichtenberger P, Serpa JA, Bouzigard R, Castellino LM, O'Connell EM. PMID: 42005930; PMCID: PMC13087451.
      View in: PubMed   Mentions:
    4. First reported case of Capnocytophaga cynodegmi infective endocarditis: A diagnostic odyssey. Int J Infect Dis. 2026 Mar; 164:108446. Tran LNB, Zhuo R, Singha M, Sekhon H, Yang S, Fishbein GA, Tymchuk C, Allyn PR. PMID: 41619833.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    5. A 73-Year-Old Woman With a 7-Year History of a Slowly Growing Lung Mass and Hemoptysis Mimicking Malignancy. Arch Bronconeumol. 2026 Jun; 62(6):428-430. Qi L, Allyn Iii PR, Fishbein GA. PMID: 41620361.
      View in: PubMed   Mentions:    Fields:    
    6. Anti-SARS-CoV-2 Immunoglobulin G Antibody Titers in Contemporary Lots of Intravenous Immunoglobulin and Fresh Frozen Plasma Compared With COVID-19 Convalescent Plasma. Clin Infect Dis. 2025 07 18; 80(6):1269-1271. Smith EA, Javier GM, Multani A, Beaird OE, Gaynor P, Yanagimoto-Ogawa L, Schaenman J, Allyn P, Alfarhat G, Vijayan T, Ziman A, Garner O. PMID: 39895318.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    7. Real-world clinical impact of plasma cell-free DNA metagenomic next-generation sequencing assay. Infect Control Hosp Epidemiol. 2025 May; 46(5):504-511. Kaur I, Shaw B, Multani A, Pham C, Malhotra S, Smith E, Adachi K, Allyn P, Bango Z, Beaird OE, Caldera JR, Chandrasekaran S, Chan L, Cheema R, Daouk S, Deville J, Dong HV, Fan A, Garner O, Gaynor P, Gray H, Gorin A, Kalava S, Kanatani M, Karnaze A, Saleh T, Sharma Y, Stauber S, Vargas M, Veral M, Winston D, Yanagimoto-Ogawa L, Aldrovandi G, Nielsen-Saines K, Fuller T, Jackson N, Uslan D, Schaenman J, Vijayan T, Sakona A, Yang S. PMID: 39881594; PMCID: PMC12034450.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    8. Isolated cerebral cryptococcoma. IDCases. 2023; 32:e01804. Zamora Gonzalez RA, Allyn PR, Sakona AN. PMID: 37250378; PMCID: PMC10220249.
      View in: PubMed   Mentions:
    9. Disguised as Ovarian Tumor: A Rare Case of Uterine Abscess Due to Hypervirulent Klebsiella pneumoniae Infection. Open Forum Infect Dis. 2022 Jul; 9(7):ofac321. Kamau E, Ranson EL, Zakhour M, Mayo MS, Sakona AN, Allyn PR, Yang S. PMID: 35899277; PMCID: PMC9310266.
      View in: PubMed   Mentions: 1  
    10. Isavuconazole for treatment of refractory coccidioidal meningitis with concomitant cerebrospinal fluid and plasma therapeutic drug monitoring. Med Mycol. 2021 Sep 03; 59(9):939-942. Davis MR, Chang S, Gaynor P, McCreary EK, Allyn P. PMID: 34143187.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    11. Investigation of Phylogeny and Drug Resistance Mechanisms of Elizabethkingia anophelis Isolated from Blood and Lower Respiratory Tract. Microb Drug Resist. 2021 Sep; 27(9):1259-1264. Larkin PMK, Mortimer L, Malenfant JH, Gaynor P, Contreras DA, Garner OB, Yang S, Allyn P. PMID: 33656389.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    12. Endogenous Endophthalmitis Caused by ST66-K2 Hypervirulent Klebsiella pneumoniae, United States. Emerg Infect Dis. 2021; 27(8):2215-2218. Kamau E, Allyn PR, Beaird OE, Ward KW, Kwan N, Garner OB, Yang S. PMID: 34287130; PMCID: PMC8314818.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    13. Clinical Metagenomic Sequencing for Diagnosis of Meningitis and Encephalitis. N Engl J Med. 2019 06 13; 380(24):2327-2340. Wilson MR, Sample HA, Zorn KC, Arevalo S, Yu G, Neuhaus J, Federman S, Stryke D, Briggs B, Langelier C, Berger A, Douglas V, Josephson SA, Chow FC, Fulton BD, DeRisi JL, Gelfand JM, Naccache SN, Bender J, Dien Bard J, Murkey J, Carlson M, Vespa PM, Vijayan T, Allyn PR, Campeau S, Humphries RM, Klausner JD, Ganzon CD, Memar F, Ocampo NA, Zimmermann LL, Cohen SH, Polage CR, DeBiasi RL, Haller B, Dallas R, Maron G, Hayden R, Messacar K, Dominguez SR, Miller S, Chiu CY. PMID: 31189036; PMCID: PMC6764751.
      View in: PubMed   Mentions: 539     Fields:    Translation:HumansCTClinical Trials
    14. Primary Prevention of Clostridium difficile-Associated Diarrhea: Current Controversies and Future Tools. Curr Infect Dis Rep. 2018 Jun 29; 20(9):32. Rubin ZA, Martin EM, Allyn P. PMID: 29959605.
      View in: PubMed   Mentions: 3  
    15. Attitudes and potential barriers towards hepatitis C treatment in patients with and without HIV coinfection. Int J STD AIDS. 2018 03; 29(4):334-340. Allyn PR, O'Malley SM, Ferguson J, Tseng CH, Chew KW, Bhattacharya D. PMID: 28820346; PMCID: PMC5670019.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    16. Graft Loss and CLAD-Onset Is Hastened by Viral Pneumonia After Lung Transplantation. Transplantation. 2016 Nov; 100(11):2424-2431. Allyn PR, Duffy EL, Humphries RM, Injean P, Weigt SS, Saggar R, Shino MY, Lynch JP, Ardehali A, Kubak B, Tseng CH, Belperio JA, Ross DJ, Gregson AL. PMID: 27467538; PMCID: PMC5077663.
      View in: PubMed   Mentions: 31     Fields:    Translation:Humans
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