-
Reference genome for the endangered, genetically subdivided, northern tidewater goby, Eucyclogobius newberryi. J Hered. 2024 Oct 05.
Jacobs DK, Kinziger A, Abrecht M, McCraney WT, Hà BA, Spies BT, Heath-Heckman E, Marimuhtu MPA, Nguyen O, Fairbairn CW, Seligmann WE, Escalona M, Miller C, Shaffer HB. PMID: 39367793.
View in:
PubMed Mentions: Fields:
-
Genetic structure and historic demography of endangered unarmoured threespine stickleback at southern latitudes signals a potential new management approach. Mol Ecol. 2022 12; 31(24):6515-6530.
Turba R, Richmond JQ, Fitz-Gibbon S, Morselli M, Fisher RN, Swift CC, Ruiz-Campos G, Backlin AR, Dellith C, Jacobs DK. PMID: 36205603; PMCID: PMC10092051.
View in:
PubMed Mentions:
1 Fields:
Translation:
AnimalsCells
-
First sequencing of ancient coral skeletal proteins. Sci Rep. 2020 11 10; 10(1):19407.
Drake JL, Whitelegge JP, Jacobs DK. PMID: 33173075; PMCID: PMC7655939.
View in:
PubMed Mentions:
6 Fields:
Translation:
AnimalsCells
-
Mechanisms of cnidocyte development in the moon jellyfish Aurelia. Evol Dev. 2019 03; 21(2):72-81.
Gold DA, Lau CLF, Fuong H, Kao G, Hartenstein V, Jacobs DK. PMID: 30623570; PMCID: PMC7211293.
View in:
PubMed Mentions:
3 Fields:
Translation:
Animals
-
The genome of the jellyfish Aurelia and the evolution of animal complexity. Nat Ecol Evol. 2019 01; 3(1):96-104.
Gold DA, Katsuki T, Li Y, Yan X, Regulski M, Ibberson D, Holstein T, Steele RE, Jacobs DK, Greenspan RJ. PMID: 30510179.
View in:
PubMed Mentions:
45 Fields:
Translation:
Animals
-
How sea level change mediates genetic divergence in coastal species across regions with varying tectonic and sediment processes. Mol Ecol. 2018 02; 27(4):994-1011.
Dolby GA, Ellingson RA, Findley LT, Jacobs DK. PMID: 29336083.
View in:
PubMed Mentions:
5 Fields:
Translation:
Animals
-
Mitogenomics supports an unexpected taxonomic relationship for the extinct diving duck Chendytes lawi and definitively places the extinct Labrador Duck. Mol Phylogenet Evol. 2018 05; 122:102-109.
Buckner JC, Ellingson R, Gold DA, Jones TL, Jacobs DK. PMID: 29247849.
View in:
PubMed Mentions:
3 Fields:
Translation:
Animals
-
Introgression between ecologically distinct species following increased salinity in the Colorado Delta- Worldwide implications for impacted estuary diversity. PeerJ. 2017; 5:e4056.
Lau CLF, Jacobs DK. PMID: 29250463; PMCID: PMC5731342.
View in:
PubMed Mentions:
4 Fields:
-
Sea-level driven glacial-age refugia and post-glacial mixing on subtropical coasts, a palaeohabitat and genetic study. Proc Biol Sci. 2016 Nov 30; 283(1843).
Dolby GA, Hechinger R, Ellingson RA, Findley LT, Lorda J, Jacobs DK. PMID: 27903870; PMCID: PMC5136581.
View in:
PubMed Mentions:
8 Fields:
Translation:
Animals
-
Cell tracking supports secondary gastrulation in the moon jellyfish Aurelia. Dev Genes Evol. 2016 11; 226(6):383-387.
Gold DA, Nakanishi N, Hensley NM, Hartenstein V, Jacobs DK. PMID: 27535146.
View in:
PubMed Mentions:
4 Fields:
Translation:
Animals
-
A New Species of the Bay Goby Genus Eucyclogobius, Endemic to Southern California: Evolution, Conservation, and Decline. PLoS One. 2016; 11(7):e0158543.
Swift CC, Spies B, Ellingson RA, Jacobs DK. PMID: 27462700; PMCID: PMC4963035.
View in:
PubMed Mentions: Fields:
Translation:
Animals
-
Benefits of commercial weight-loss programs on blood pressure and lipids: a systematic review. Prev Med. 2016 09; 90:86-99.
Mehta AK, Doshi RS, Chaudhry ZW, Jacobs DK, Vakil RM, Lee CJ, Bleich SN, Clark JM, Gudzune KA. PMID: 27373206; PMCID: PMC5300307.
View in:
PubMed Mentions:
8 Fields:
Translation:
HumansPHPublic Health
-
Direct comparisons of commercial weight-loss programs on weight, waist circumference, and blood pressure: a systematic review. BMC Public Health. 2016 06 01; 16:460.
Vakil RM, Doshi RS, Mehta AK, Chaudhry ZW, Jacobs DK, Lee CJ, Bleich SN, Clark JM, Gudzune KA. PMID: 27246464; PMCID: PMC4888663.
View in:
PubMed Mentions:
4 Fields:
Translation:
Humans
-
Temporal genetic analysis of the endangered tidewater goby: extinction-colonization dynamics or drift in isolation? Mol Ecol. 2015 Nov; 24(22):5544-60.
Kinziger AP, Hellmair M, McCraney WT, Jacobs DK, Goldsmith G. PMID: 26460923.
View in:
PubMed Mentions:
1 Fields:
Translation:
AnimalsCells
-
Ancestral state reconstruction of ontogeny supports a bilaterian affinity for Dickinsonia. Evol Dev. 2015 Nov-Dec; 17(6):315-24.
Gold DA, Runnegar B, Gehling JG, Jacobs DK. PMID: 26492825.
View in:
PubMed Mentions:
18 Fields:
Translation:
Animals
-
Structural and Developmental Disparity in the Tentacles of the Moon Jellyfish Aurelia sp.1. PLoS One. 2015; 10(8):e0134741.
Gold DA, Nakanishi N, Hensley NM, Cozzolino K, Tabatabaee M, Martin M, Hartenstein V, Jacobs DK. PMID: 26241309; PMCID: PMC4524682.
View in:
PubMed Mentions:
7 Fields:
Translation:
Animals
-
Gene Expression Data from the Moon Jelly, Aurelia, Provide Insights into the Evolution of the Combinatorial Code Controlling Animal Sense Organ Development. PLoS One. 2015; 10(7):e0132544.
Nakanishi N, Camara AC, Yuan DC, Gold DA, Jacobs DK. PMID: 26225420; PMCID: PMC4520661.
View in:
PubMed Mentions:
8 Fields:
Translation:
AnimalsCells
-
Efficacy of commercial weight-loss programs: an updated systematic review. Ann Intern Med. 2015 Apr 07; 162(7):501-12.
Gudzune KA, Doshi RS, Mehta AK, Chaudhry ZW, Jacobs DK, Vakil RM, Lee CJ, Bleich SN, Clark JM. PMID: 25844997; PMCID: PMC4446719.
View in:
PubMed Mentions:
134 Fields:
Translation:
Humans
-
The early expansion and evolutionary dynamics of POU class genes. Mol Biol Evol. 2014 Dec; 31(12):3136-47.
Gold DA, Gates RD, Jacobs DK. PMID: 25261405; PMCID: PMC4245813.
View in:
PubMed Mentions:
28 Fields:
Translation:
AnimalsCells
-
Canopy flow analysis reveals the advantage of size in the oldest communities of multicellular eukaryotes. Curr Biol. 2014 Feb 03; 24(3):305-9.
Ghisalberti M, Gold DA, Laflamme M, Clapham ME, Narbonne GM, Summons RE, Johnston DT, Jacobs DK. PMID: 24462003; PMCID: PMC4428146.
View in:
PubMed Mentions:
15 Fields:
Translation:
Animals
-
Attempted DNA extraction from a Rancho La Brea Columbian mammoth (Mammuthus columbi): prospects for ancient DNA from asphalt deposits. Ecol Evol. 2014 Feb; 4(4):329-36.
Gold DA, Robinson J, Farrell AB, Harris JM, Thalmann O, Jacobs DK. PMID: 24634719; PMCID: PMC3936381.
View in:
PubMed Mentions:
3
-
Regional differences in seasonal timing of rainfall discriminate between genetically distinct East African giraffe taxa. PLoS One. 2013; 8(10):e77191.
Thomassen HA, Freedman AH, Brown DM, Buermann W, Jacobs DK. PMID: 24194870; PMCID: PMC3806738.
View in:
PubMed Mentions:
2 Fields:
Translation:
AnimalsCells
-
Convergent evolution of ecomorphological adaptations in geographically isolated Bay gobies (Teleostei: Gobionellidae) of the temperate North Pacific. Mol Phylogenet Evol. 2014 Jan; 70:464-77.
Ellingson RA, Swift CC, Findley LT, Jacobs DK. PMID: 24148989.
View in:
PubMed Mentions:
9 Fields:
Translation:
AnimalsCells
-
Expression of the Lhx genes apterous and lim1 in an errant polychaete: implications for bilaterian appendage evolution, neural development, and muscle diversification. Evodevo. 2013 Feb 01; 4(1):4.
Winchell CJ, Jacobs DK. PMID: 23369627; PMCID: PMC3579752.
View in:
PubMed Mentions:
4
-
Stem cell dynamics in Cnidaria: are there unifying principles? Dev Genes Evol. 2013 Mar; 223(1-2):53-66.
Gold DA, Jacobs DK. PMID: 23179637; PMCID: PMC7211294.
View in:
PubMed Mentions:
41 Fields:
Translation:
AnimalsCells
-
Flying shells: historical dispersal of marine snails across Central America. Proc Biol Sci. 2012 Mar 22; 279(1731):1061-7.
Miura O, Torchin ME, Bermingham E, Jacobs DK, Hechinger RF. PMID: 21920976; PMCID: PMC3267146.
View in:
PubMed Mentions:
10 Fields:
Translation:
Animals
-
Expression of Distal-less, dachshund, and optomotor blind in Neanthes arenaceodentata (Annelida, Nereididae) does not support homology of appendage-forming mechanisms across the Bilateria. Dev Genes Evol. 2010 Dec; 220(9-10):275-95.
Winchell CJ, Valencia JE, Jacobs DK. PMID: 21116826; PMCID: PMC3005117.
View in:
PubMed Mentions:
8 Fields:
Translation:
Animals
-
Rampant drift in artificially fragmented populations of the endangered tidewater goby (Eucyclogobius newberryi). Mol Ecol. 2010 Aug; 19(16):3315-27.
McCraney WT, Goldsmith G, Jacobs DK, Kinziger AP. PMID: 20666998.
View in:
PubMed Mentions:
7 Fields:
Translation:
AnimalsCells
-
Evolutionary origin of rhopalia: insights from cellular-level analyses of Otx and POU expression patterns in the developing rhopalial nervous system. Evol Dev. 2010 Jul-Aug; 12(4):404-15.
Nakanishi N, Yuan D, Hartenstein V, Jacobs DK. PMID: 20618436.
View in:
PubMed Mentions:
16 Fields:
Translation:
Animals
-
Confocal analysis of nervous system architecture in direct-developing juveniles of Neanthes arenaceodentata (Annelida, Nereididae). Front Zool. 2010 Jun 16; 7:17.
Winchell CJ, Valencia JE, Jacobs DK. PMID: 20553614; PMCID: PMC2909921.
View in:
PubMed Mentions:
17
-
Phylogeography of the diamond turbot (Hypsopsetta guttulata) across the Baja California Peninsula. Mar Biol. 2010; 157(1):123-134.
Schinske JN, Bernardi G, Jacobs DK, Routman EJ. PMID: 24391239; PMCID: PMC3873029.
View in:
PubMed Mentions:
1
-
Paleontology. Flourishing after the end-Permian mass extinction. Science. 2009 Aug 28; 325(5944):1079-80.
Marshall CR, Jacobs DK. PMID: 19713513.
View in:
PubMed Mentions:
1 Fields:
Translation:
Animals
-
Development of the rhopalial nervous system in Aurelia sp.1 (Cnidaria, Scyphozoa). Dev Genes Evol. 2009 Jun; 219(6):301-17.
Nakanishi N, Hartenstein V, Jacobs DK. PMID: 19543911; PMCID: PMC2706374.
View in:
PubMed Mentions:
23 Fields:
Translation:
AnimalsCells
-
Embryonic development and metamorphosis of the scyphozoan Aurelia. Dev Genes Evol. 2008 Oct; 218(10):525-39.
Yuan D, Nakanishi N, Jacobs DK, Hartenstein V. PMID: 18850238.
View in:
PubMed Mentions:
25 Fields:
Translation:
Animals
-
Early development, pattern, and reorganization of the planula nervous system in Aurelia (Cnidaria, Scyphozoa). Dev Genes Evol. 2008 Oct; 218(10):511-24.
Nakanishi N, Yuan D, Jacobs DK, Hartenstein V. PMID: 18850237.
View in:
PubMed Mentions:
21 Fields:
Translation:
AnimalsCells
-
Extensive population genetic structure in the giraffe. BMC Biol. 2007 Dec 21; 5:57.
Brown DM, Brenneman RA, Koepfli KP, Pollinger JP, Milá B, Georgiadis NJ, Louis EE, Grether GF, Jacobs DK, Wayne RK. PMID: 18154651; PMCID: PMC2254591.
View in:
PubMed Mentions:
44 Fields:
Translation:
AnimalsCells
-
The end of everything: metazoan terminal addition. Evol Dev. 2005 Nov-Dec; 7(6):497.
Hughes NC, Jacobs DK. PMID: 16336404.
View in:
PubMed Mentions:
1 Fields:
Translation:
Animals
-
Terminal addition, the Cambrian radiation and the Phanerozoic evolution of bilaterian form. Evol Dev. 2005 Nov-Dec; 7(6):498-514.
Jacobs DK, Hughes NC, Fitz-Gibbon ST, Winchell CJ. PMID: 16336405.
View in:
PubMed Mentions:
15 Fields:
Translation:
HumansAnimals
-
sine oculis in basal Metazoa. Dev Genes Evol. 2004 Jul; 214(7):342-51.
Bebenek IG, Gates RD, Morris J, Hartenstein V, Jacobs DK. PMID: 15221378.
View in:
PubMed Mentions:
17 Fields:
Translation:
AnimalsCells
-
Gene fishing: the use of a simple protocol to isolate multiple homeodomain classes from diverse invertebrate taxa. J Mol Evol. 2003 Apr; 56(4):509-16.
Lee SE, Gates RD, Jacobs DK. PMID: 12718333.
View in:
PubMed Mentions:
8 Fields:
Translation:
AnimalsCells
-
AmphiNk2-tin, an amphioxus homeobox gene expressed in myocardial progenitors: insights into evolution of the vertebrate heart. Dev Biol. 2003 Mar 01; 255(1):128-37.
Holland ND, Venkatesh TV, Holland LZ, Jacobs DK, Bodmer R. PMID: 12618138.
View in:
PubMed Mentions:
22 Fields:
Translation:
AnimalsCells
-
Developmental genes and the reconstruction of metazoan evolution--implications of evolutionary loss, limits on inference of ancestry and type 2 errors. Integr Comp Biol. 2003 Feb; 43(1):11-8.
Jacobs DK, Gates RD. PMID: 21680405.
View in:
PubMed Mentions:
6 Fields:
-
Embryonic development in the primitive bilaterian Neochildia fusca: normal morphogenesis and isolation of POU genes Brn-1 and Brn-3. Dev Genes Evol. 2002 Mar; 212(2):55-69.
Ramachandra NB, Gates RD, Ladurner P, Jacobs DK, Hartenstein V. PMID: 11914937.
View in:
PubMed Mentions:
21 Fields:
Translation:
AnimalsCells
-
Molluscan engrailed expression, serial organization, and shell evolution. Evol Dev. 2000 Nov-Dec; 2(6):340-7.
Jacobs DK, Wray CG, Wedeen CJ, Kostriken R, DeSalle R, Staton JL, Gates RD, Lindberg DR. PMID: 11256378.
View in:
PubMed Mentions:
26 Fields:
Translation:
Animals