Stephen Michael Smith

Title(s)Hs Clinical Instructor, Pediatrics
SchoolMedicine
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Automating the Human Connectome Project's Temporal ICA Pipeline. bioRxiv. 2024 Jan 16. Yang C, Coalson TS, Smith SM, Elam JS, Van Essen DC, Glasser MF. PMID: 38293188; PMCID: PMC10827070.
      View in: PubMed   Mentions:
    2. ICAM-Reg: Interpretable Classification and Regression With Feature Attribution for Mapping Neurological Phenotypes in Individual Scans. IEEE Trans Med Imaging. 2023 04; 42(4):959-970. Bass C, Silva MD, Sudre C, Williams LZJ, Sousa HS, Tudosiu PD, Alfaro-Almagro F, Fitzgibbon SP, Glasser MF, Smith SM, Robinson EC. PMID: 36374873; PMCID: PMC10315989.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    3. Functional connectivity between interoceptive brain regions is associated with distinct health-related domains: A population-based neuroimaging study. Hum Brain Mapp. 2023 06 01; 44(8):3210-3221. Luettich A, Sievers C, Alfaro Almagro F, Allen M, Jbabdi S, Smith SM, Pattinson KTS. PMID: 36939141; PMCID: PMC10171512.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    4. Structural and functional asymmetry of the neonatal cerebral cortex. Nat Hum Behav. 2023 Jun; 7(6):942-955. Williams LZJ, Fitzgibbon SP, Bozek J, Winkler AM, Dimitrova R, Poppe T, Schuh A, Makropoulos A, Cupitt J, O'Muircheartaigh J, Duff EP, Cordero-Grande L, Price AN, Hajnal JV, Rueckert D, Smith SM, Edwards AD, Robinson EC. PMID: 36928781.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    5. Amplitudes of resting-state functional networks - investigation into their correlates and biophysical properties. Neuroimage. 2023 01; 265:119779. Lee S, Bijsterbosch JD, Almagro FA, Elliott L, McCarthy P, Taschler B, Sala-Llonch R, Beckmann CF, Duff EP, Smith SM, Douaud G. PMID: 36462729; PMCID: PMC10933815.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    6. Causal inference on neuroimaging data with Mendelian randomisation. Neuroimage. 2022 09; 258:119385. Taschler B, Smith SM, Nichols TE. PMID: 35714886; PMCID: PMC10933777.
      View in: PubMed   Mentions: 8     Fields:    
    7. The Developing Human Connectome Project Neonatal Data Release. Front Neurosci. 2022; 16:886772. Edwards AD, Rueckert D, Smith SM, Abo Seada S, Alansary A, Almalbis J, Allsop J, Andersson J, Arichi T, Arulkumaran S, Bastiani M, Batalle D, Baxter L, Bozek J, Braithwaite E, Brandon J, Carney O, Chew A, Christiaens D, Chung R, Colford K, Cordero-Grande L, Counsell SJ, Cullen H, Cupitt J, Curtis C, Davidson A, Deprez M, Dillon L, Dimitrakopoulou K, Dimitrova R, Duff E, Falconer S, Farahibozorg SR, Fitzgibbon SP, Gao J, Gaspar A, Harper N, Harrison SJ, Hughes EJ, Hutter J, Jenkinson M, Jbabdi S, Jones E, Karolis V, Kyriakopoulou V, Lenz G, Makropoulos A, Malik S, Mason L, Mortari F, Nosarti C, Nunes RG, O'Keeffe C, O'Muircheartaigh J, Patel H, Passerat-Palmbach J, Pietsch M, Price AN, Robinson EC, Rutherford MA, Schuh A, Sotiropoulos S, Steinweg J, Teixeira RPAG, Tenev T, Tournier JD, Tusor N, Uus A, Vecchiato K, Williams LZJ, Wright R, Wurie J, Hajnal JV. PMID: 35677357; PMCID: PMC9169090.
      View in: PubMed   Mentions: 29  
    8. Deep neural networks learn general and clinically relevant representations of the ageing brain. Neuroimage. 2022 08 01; 256:119210. Leonardsen EH, Peng H, Kaufmann T, Agartz I, Andreassen OA, Celius EG, Espeseth T, Harbo HF, Høgestøl EA, Lange AM, Marquand AF, Vidal-Piñeiro D, Roe JM, Selbæk G, Sørensen Ø, Smith SM, Westlye LT, Wolfers T, Wang Y. PMID: 35462035; PMCID: PMC7614754.
      View in: PubMed   Mentions: 29     Fields:    Translation:Humans
    9. Multi-dynamic modelling reveals strongly time-varying resting fMRI correlations. Med Image Anal. 2022 04; 77:102366. Pervaiz U, Vidaurre D, Gohil C, Smith SM, Woolrich MW. PMID: 35131700; PMCID: PMC8907871.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    10. Erratum to: The Developing Human Connectome Project: typical and disrupted perinatal functional connectivity. Brain. 2021 Oct 22; 144(9):e80. Eyre M, Fitzgibbon SP, Ciarrusta J, Cordero-Grande L, Price AN, Poppe T, Schuh A, Hughes E, O'Keeffe C, Brandon J, Cromb D, Vecchiato K, Andersson J, Duff EP, Counsell SJ, Smith SM, Rueckert D, Hajnal JV, Arichi T, O'Muircheartaigh J, Batalle D, Edwards AD. PMID: 34219164; PMCID: PMC8536930.
      View in: PubMed   Mentions: 1     Fields:    
    11. The Human Connectome Project: A retrospective. Neuroimage. 2021 12 01; 244:118543. Elam JS, Glasser MF, Harms MP, Sotiropoulos SN, Andersson JLR, Burgess GC, Curtiss SW, Oostenveld R, Larson-Prior LJ, Schoffelen JM, Hodge MR, Cler EA, Marcus DM, Barch DM, Yacoub E, Smith SM, Ugurbil K, Van Essen DC. PMID: 34508893; PMCID: PMC9387634.
      View in: PubMed   Mentions: 59     Fields:    Translation:Humans
    12. Hierarchical modelling of functional brain networks in population and individuals from big fMRI data. Neuroimage. 2021 11; 243:118513. Farahibozorg SR, Bijsterbosch JD, Gong W, Jbabdi S, Smith SM, Harrison SJ, Woolrich MW. PMID: 34450262; PMCID: PMC8526871.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    13. The Developing Human Connectome Project: typical and disrupted perinatal functional connectivity. Brain. 2021 08 17; 144(7):2199-2213. Eyre M, Fitzgibbon SP, Ciarrusta J, Cordero-Grande L, Price AN, Poppe T, Schuh A, Hughes E, O'Keeffe C, Brandon J, Cromb D, Vecchiato K, Andersson J, Duff EP, Counsell SJ, Smith SM, Rueckert D, Hajnal JV, Arichi T, O'Muircheartaigh J, Batalle D, Edwards AD. PMID: 33734321; PMCID: PMC8370420.
      View in: PubMed   Mentions: 39     Fields:    Translation:Humans
    14. Phenotype discovery from population brain imaging. Med Image Anal. 2021 07; 71:102050. Gong W, Beckmann CF, Smith SM. PMID: 33905882; PMCID: PMC8850869.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    15. Learning patterns of the ageing brain in MRI using deep convolutional networks. Neuroimage. 2021 01 01; 224:117401. Dinsdale NK, Bluemke E, Smith SM, Arya Z, Vidaurre D, Jenkinson M, Namburete AIL. PMID: 32979523.
      View in: PubMed   Mentions: 37     Fields:    Translation:Humans
    16. The developing Human Connectome Project (dHCP) automated resting-state functional processing framework for newborn infants. Neuroimage. 2020 12; 223:117303. Fitzgibbon SP, Harrison SJ, Jenkinson M, Baxter L, Robinson EC, Bastiani M, Bozek J, Karolis V, Cordero Grande L, Price AN, Hughes E, Makropoulos A, Passerat-Palmbach J, Schuh A, Gao J, Farahibozorg SR, O'Muircheartaigh J, Ciarrusta J, O'Keeffe C, Brandon J, Arichi T, Rueckert D, Hajnal JV, Edwards AD, Smith SM, Duff E, Andersson J. PMID: 32866666; PMCID: PMC7762845.
      View in: PubMed   Mentions: 40     Fields:    Translation:Humans
    17. Modelling subject variability in the spatial and temporal characteristics of functional modes. Neuroimage. 2020 11 15; 222:117226. Harrison SJ, Bijsterbosch JD, Segerdahl AR, Fitzgibbon SP, Farahibozorg SR, Duff EP, Smith SM, Woolrich MW. PMID: 32771617; PMCID: PMC7779373.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    18. Impaired glucose metabolism in patients with diabetes, prediabetes, and obesity is associated with severe COVID-19. J Med Virol. 2021 01; 93(1):409-415. Smith SM, Boppana A, Traupman JA, Unson E, Maddock DA, Chao K, Dobesh DP, Brufsky A, Connor RI. PMID: 32589756; PMCID: PMC7361926.
      View in: PubMed   Mentions: 94     Fields:    Translation:HumansCells
    19. Permutation inference for canonical correlation analysis. Neuroimage. 2020 10 15; 220:117065. Winkler AM, Renaud O, Smith SM, Nichols TE. PMID: 32603857; PMCID: PMC7573815.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    20. Confound modelling in UK Biobank brain imaging. Neuroimage. 2021 01 01; 224:117002. Alfaro-Almagro F, McCarthy P, Afyouni S, Andersson JLR, Bastiani M, Miller KL, Nichols TE, Smith SM. PMID: 32502668; PMCID: PMC7610719.
      View in: PubMed   Mentions: 75     Fields:    Translation:Humans
    21. A Symmetric Prior for the Regularisation of Elastic Deformations: Improved anatomical plausibility in nonlinear image registration. Neuroimage. 2020 10 01; 219:116962. Lange FJ, Ashburner J, Smith SM, Andersson JLR. PMID: 32497785; PMCID: PMC7610794.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    22. The UK Biobank imaging enhancement of 100,000 participants: rationale, data collection, management and future directions. Nat Commun. 2020 05 26; 11(1):2624. Littlejohns TJ, Holliday J, Gibson LM, Garratt S, Oesingmann N, Alfaro-Almagro F, Bell JD, Boultwood C, Collins R, Conroy MC, Crabtree N, Doherty N, Frangi AF, Harvey NC, Leeson P, Miller KL, Neubauer S, Petersen SE, Sellors J, Sheard S, Smith SM, Sudlow CLM, Matthews PM, Allen NE. PMID: 32457287; PMCID: PMC7250878.
      View in: PubMed   Mentions: 206     Fields:    Translation:Humans
    23. Brain aging comprises many modes of structural and functional change with distinct genetic and biophysical associations. Elife. 2020 03 05; 9. Smith SM, Elliott LT, Alfaro-Almagro F, McCarthy P, Nichols TE, Douaud G, Miller KL. PMID: 32134384; PMCID: PMC7162660.
      View in: PubMed   Mentions: 71     Fields:    Translation:Humans
    24. Optimising network modelling methods for fMRI. Neuroimage. 2020 05 01; 211:116604. Pervaiz U, Vidaurre D, Woolrich MW, Smith SM. PMID: 32062083; PMCID: PMC7086233.
      View in: PubMed   Mentions: 89     Fields:    Translation:Humans
    25. Denoising scanner effects from multimodal MRI data using linked independent component analysis. Neuroimage. 2020 03; 208:116388. Li H, Smith SM, Gruber S, Lukas SE, Silveri MM, Hill KP, Killgore WDS, Nickerson LD. PMID: 31765802.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    26. Hippocampal volume across age: Nomograms derived from over 19,700 people in UK Biobank. Neuroimage Clin. 2019; 23:101904. Nobis L, Manohar SG, Smith SM, Alfaro-Almagro F, Jenkinson M, Mackay CE, Husain M. PMID: 31254939; PMCID: PMC6603440.
      View in: PubMed   Mentions: 55     Fields:    Translation:Humans
    27. Estimation of brain age delta from brain imaging. Neuroimage. 2019 10 15; 200:528-539. Smith SM, Vidaurre D, Alfaro-Almagro F, Nichols TE, Miller KL. PMID: 31201988; PMCID: PMC6711452.
      View in: PubMed   Mentions: 143     Fields:    Translation:Humans
    28. Effective degrees of freedom of the Pearson's correlation coefficient under autocorrelation. Neuroimage. 2019 10 01; 199:609-625. Afyouni S, Smith SM, Nichols TE. PMID: 31158478; PMCID: PMC6693558.
      View in: PubMed   Mentions: 29     Fields:    Translation:Humans
    29. The relationship between spatial configuration and functional connectivity of brain regions revisited. Elife. 2019 05 08; 8. Bijsterbosch JD, Beckmann CF, Woolrich MW, Smith SM, Harrison SJ. PMID: 31066676; PMCID: PMC6541435.
      View in: PubMed   Mentions: 32     Fields:    Translation:Humans
    30. Classification of temporal ICA components for separating global noise from fMRI data: Reply to Power. Neuroimage. 2019 08 15; 197:435-438. Glasser MF, Coalson TS, Bijsterbosch JD, Harrison SJ, Harms MP, Anticevic A, Van Essen DC, Smith SM. PMID: 31026516; PMCID: PMC6591096.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    31. The spatial correspondence and genetic influence of interhemispheric connectivity with white matter microstructure. Nat Neurosci. 2019 05; 22(5):809-819. Mollink J, Smith SM, Elliott LT, Kleinnijenhuis M, Hiemstra M, Alfaro-Almagro F, Marchini J, van Cappellen van Walsum AM, Jbabdi S, Miller KL. PMID: 30988526; PMCID: PMC6517273.
      View in: PubMed   Mentions: 27     Fields:    Translation:Humans
    32. Multidisciplinary sarcoma care. Curr Probl Surg. 2018 Dec; 55(12):517-580. Pollock RE, Payne JE, Rogers AD, Smith SM, Iwenofu OH, Valerio IL, Zomerlei TA, Howard JH, Dornbos D, Galgano MA, Goulart C, Mendel E, Miller ED, Xu-Welliver M, Martin DD, Haglund KE, Bupathi M, Chen JL, Yeager ND. PMID: 30526918.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    33. The Lifespan Human Connectome Project in Aging: An overview. Neuroimage. 2019 01 15; 185:335-348. Bookheimer SY, Salat DH, Terpstra M, Ances BM, Barch DM, Buckner RL, Burgess GC, Curtiss SW, Diaz-Santos M, Elam JS, Fischl B, Greve DN, Hagy HA, Harms MP, Hatch OM, Hedden T, Hodge C, Japardi KC, Kuhn TP, Ly TK, Smith SM, Somerville LH, Ugurbil K, van der Kouwe A, Van Essen D, Woods RP, Yacoub E. PMID: 30332613; PMCID: PMC6649668.
      View in: PubMed   Mentions: 126     Fields:    Translation:Humans
    34. Genome-wide association studies of brain imaging phenotypes in UK Biobank. Nature. 2018 10; 562(7726):210-216. Elliott LT, Sharp K, Alfaro-Almagro F, Shi S, Miller KL, Douaud G, Marchini J, Smith SM. PMID: 30305740; PMCID: PMC6786974.
      View in: PubMed   Mentions: 296     Fields:    Translation:HumansCells
    35. Spatial parcellations, spectral filtering, and connectivity measures in fMRI: Optimizing for discrimination. Hum Brain Mapp. 2019 02 01; 40(2):407-419. Sala-Llonch R, Smith SM, Woolrich M, Duff EP. PMID: 30259597; PMCID: PMC6492132.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    36. Extending the Human Connectome Project across ages: Imaging protocols for the Lifespan Development and Aging projects. Neuroimage. 2018 12; 183:972-984. Harms MP, Somerville LH, Ances BM, Andersson J, Barch DM, Bastiani M, Bookheimer SY, Brown TB, Buckner RL, Burgess GC, Coalson TS, Chappell MA, Dapretto M, Douaud G, Fischl B, Glasser MF, Greve DN, Hodge C, Jamison KW, Jbabdi S, Kandala S, Li X, Mair RW, Mangia S, Marcus D, Mascali D, Moeller S, Nichols TE, Robinson EC, Salat DH, Smith SM, Sotiropoulos SN, Terpstra M, Thomas KM, Tisdall MD, Ugurbil K, van der Kouwe A, Woods RP, Zöllei L, Van Essen DC, Yacoub E. PMID: 30261308; PMCID: PMC6484842.
      View in: PubMed   Mentions: 187     Fields:    Translation:Humans
    37. The Lifespan Human Connectome Project in Development: A large-scale study of brain connectivity development in 5-21 year olds. Neuroimage. 2018 12; 183:456-468. Somerville LH, Bookheimer SY, Buckner RL, Burgess GC, Curtiss SW, Dapretto M, Elam JS, Gaffrey MS, Harms MP, Hodge C, Kandala S, Kastman EK, Nichols TE, Schlaggar BL, Smith SM, Thomas KM, Yacoub E, Van Essen DC, Barch DM. PMID: 30142446; PMCID: PMC6416053.
      View in: PubMed   Mentions: 120     Fields:    Translation:Humans
    38. Using temporal ICA to selectively remove global noise while preserving global signal in functional MRI data. Neuroimage. 2018 11 01; 181:692-717. Glasser MF, Coalson TS, Bijsterbosch JD, Harrison SJ, Harms MP, Anticevic A, Van Essen DC, Smith SM. PMID: 29753843; PMCID: PMC6237431.
      View in: PubMed   Mentions: 113     Fields:    Translation:Humans
    39. Construction of a neonatal cortical surface atlas using Multimodal Surface Matching in the Developing Human Connectome Project. Neuroimage. 2018 10 01; 179:11-29. Bozek J, Makropoulos A, Schuh A, Fitzgibbon S, Wright R, Glasser MF, Coalson TS, O'Muircheartaigh J, Hutter J, Price AN, Cordero-Grande L, Teixeira RPAG, Hughes E, Tusor N, Baruteau KP, Rutherford MA, Edwards AD, Hajnal JV, Smith SM, Rueckert D, Jenkinson M, Robinson EC. PMID: 29890325; PMCID: PMC6783315.
      View in: PubMed   Mentions: 43     Fields:    Translation:Humans
    40. Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project. Neuroimage. 2019 01 15; 185:750-763. Bastiani M, Andersson JLR, Cordero-Grande L, Murgasova M, Hutter J, Price AN, Makropoulos A, Fitzgibbon SP, Hughes E, Rueckert D, Victor S, Rutherford M, Edwards AD, Smith SM, Tournier JD, Hajnal JV, Jbabdi S, Sotiropoulos SN. PMID: 29852283; PMCID: PMC6299258.
      View in: PubMed   Mentions: 64     Fields:    Translation:Humans
    41. Multi-subject hierarchical inverse covariance modelling improves estimation of functional brain networks. Neuroimage. 2018 09; 178:370-384. Colclough GL, Woolrich MW, Harrison SJ, Rojas López PA, Valdes-Sosa PA, Smith SM. PMID: 29746906; PMCID: PMC6565932.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimals
    42. Directed functional connectivity using dynamic graphical models. Neuroimage. 2018 07 15; 175:340-353. Schwab S, Harbord R, Zerbi V, Elliott L, Afyouni S, Smith JQ, Woolrich MW, Smith SM, Nichols TE. PMID: 29625233; PMCID: PMC6153304.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimals
    43. Disambiguating brain functional connectivity. Neuroimage. 2018 06; 173:540-550. Duff EP, Makin T, Cottaar M, Smith SM, Woolrich MW. PMID: 29476911; PMCID: PMC5929905.
      View in: PubMed   Mentions: 42     Fields:    Translation:Humans
    44. The relationship between spatial configuration and functional connectivity of brain regions. Elife. 2018 02 16; 7. Bijsterbosch JD, Woolrich MW, Glasser MF, Robinson EC, Beckmann CF, Van Essen DC, Harrison SJ, Smith SM. PMID: 29451491; PMCID: PMC5860869.
      View in: PubMed   Mentions: 94     Fields:    Translation:Humans
    45. The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction. Neuroimage. 2018 06; 173:88-112. Makropoulos A, Robinson EC, Schuh A, Wright R, Fitzgibbon S, Bozek J, Counsell SJ, Steinweg J, Vecchiato K, Passerat-Palmbach J, Lenz G, Mortari F, Tenev T, Duff EP, Bastiani M, Cordero-Grande L, Hughes E, Tusor N, Tournier JD, Hutter J, Price AN, Teixeira RPAG, Murgasova M, Victor S, Kelly C, Rutherford MA, Smith SM, Edwards AD, Hajnal JV, Jenkinson M, Rueckert D. PMID: 29409960; PMCID: PMC6783314.
      View in: PubMed   Mentions: 170     Fields:    Translation:Humans
    46. Multimodal surface matching with higher-order smoothness constraints. Neuroimage. 2018 02 15; 167:453-465. Robinson EC, Garcia K, Glasser MF, Chen Z, Coalson TS, Makropoulos A, Bozek J, Wright R, Schuh A, Webster M, Hutter J, Price A, Cordero Grande L, Hughes E, Tusor N, Bayly PV, Van Essen DC, Smith SM, Edwards AD, Hajnal J, Jenkinson M, Glocker B, Rueckert D. PMID: 29100940; PMCID: PMC5991912.
      View in: PubMed   Mentions: 118     Fields:    Translation:Humans
    47. Brain network dynamics are hierarchically organized in time. Proc Natl Acad Sci U S A. 2017 11 28; 114(48):12827-12832. Vidaurre D, Smith SM, Woolrich MW. PMID: 29087305; PMCID: PMC5715736.
      View in: PubMed   Mentions: 268     Fields:    Translation:Humans
    48. Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank. Neuroimage. 2018 02 01; 166:400-424. Alfaro-Almagro F, Jenkinson M, Bangerter NK, Andersson JLR, Griffanti L, Douaud G, Sotiropoulos SN, Jbabdi S, Hernandez-Fernandez M, Vallee E, Vidaurre D, Webster M, McCarthy P, Rorden C, Daducci A, Alexander DC, Zhang H, Dragonu I, Matthews PM, Miller KL, Smith SM. PMID: 29079522; PMCID: PMC5770339.
      View in: PubMed   Mentions: 519     Fields:    Translation:Humans
    49. The heritability of multi-modal connectivity in human brain activity. Elife. 2017 07 26; 6. Colclough GL, Smith SM, Nichols TE, Winkler AM, Sotiropoulos SN, Glasser MF, Van Essen DC, Woolrich MW. PMID: 28745584; PMCID: PMC5621837.
      View in: PubMed   Mentions: 59     Fields:    Translation:Humans
    50. Discovering dynamic brain networks from big data in rest and task. Neuroimage. 2018 10 15; 180(Pt B):646-656. Vidaurre D, Abeysuriya R, Becker R, Quinn AJ, Alfaro-Almagro F, Smith SM, Woolrich MW. PMID: 28669905; PMCID: PMC6138951.
      View in: PubMed   Mentions: 122     Fields:    Translation:Humans
    51. Studying neuroanatomy using MRI. Nat Neurosci. 2017 Feb 23; 20(3):314-326. Lerch JP, van der Kouwe AJ, Raznahan A, Paus T, Johansen-Berg H, Miller KL, Smith SM, Fischl B, Sotiropoulos SN. PMID: 28230838.
      View in: PubMed   Mentions: 115     Fields:    Translation:Humans
    52. Heterogeneous fractionation profiles of meta-analytic coactivation networks. Neuroimage. 2017 04 01; 149:424-435. Laird AR, Riedel MC, Okoe M, Jianu R, Ray KL, Eickhoff SB, Smith SM, Fox PT, Sutherland MT. PMID: 28222386; PMCID: PMC5408583.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    53. Hand classification of fMRI ICA noise components. Neuroimage. 2017 07 01; 154:188-205. Griffanti L, Douaud G, Bijsterbosch J, Evangelisti S, Alfaro-Almagro F, Glasser MF, Duff EP, Fitzgibbon S, Westphal R, Carone D, Beckmann CF, Smith SM. PMID: 27989777; PMCID: PMC5489418.
      View in: PubMed   Mentions: 215     Fields:    Translation:Humans
    54. Tradeoffs in pushing the spatial resolution of fMRI for the 7T Human Connectome Project. Neuroimage. 2017 07 01; 154:23-32. T Vu A, Jamison K, Glasser MF, Smith SM, Coalson T, Moeller S, Auerbach EJ, Ugurbil K, Yacoub E. PMID: 27894889; PMCID: PMC5445004.
      View in: PubMed   Mentions: 59     Fields:    Translation:Humans
    55. Multimodal population brain imaging in the UK Biobank prospective epidemiological study. Nat Neurosci. 2016 11; 19(11):1523-1536. Miller KL, Alfaro-Almagro F, Bangerter NK, Thomas DL, Yacoub E, Xu J, Bartsch AJ, Jbabdi S, Sotiropoulos SN, Andersson JL, Griffanti L, Douaud G, Okell TW, Weale P, Dragonu I, Garratt S, Hudson S, Collins R, Jenkinson M, Matthews PM, Smith SM. PMID: 27643430; PMCID: PMC5086094.
      View in: PubMed   Mentions: 719     Fields:    Translation:Humans
    56. The Human Connectome Project's neuroimaging approach. Nat Neurosci. 2016 08 26; 19(9):1175-87. Glasser MF, Smith SM, Marcus DS, Andersson JL, Auerbach EJ, Behrens TE, Coalson TS, Harms MP, Jenkinson M, Moeller S, Robinson EC, Sotiropoulos SN, Xu J, Yacoub E, Ugurbil K, Van Essen DC. PMID: 27571196; PMCID: PMC6172654.
      View in: PubMed   Mentions: 412     Fields:    Translation:Humans
    57. A multi-modal parcellation of human cerebral cortex. Nature. 2016 08 11; 536(7615):171-178. Glasser MF, Coalson TS, Robinson EC, Hacker CD, Harwell J, Yacoub E, Ugurbil K, Andersson J, Beckmann CF, Jenkinson M, Smith SM, Van Essen DC. PMID: 27437579; PMCID: PMC4990127.
      View in: PubMed   Mentions: 1802     Fields:    Translation:Humans
    58. Faster permutation inference in brain imaging. Neuroimage. 2016 Nov 01; 141:502-516. Winkler AM, Ridgway GR, Douaud G, Nichols TE, Smith SM. PMID: 27288322; PMCID: PMC5035139.
      View in: PubMed   Mentions: 118     Fields:    Translation:Humans
    59. The brain functional connectome is robustly altered by lack of sleep. Neuroimage. 2016 Feb 15; 127:324-332. Kaufmann T, Elvsåshagen T, Alnæs D, Zak N, Pedersen PØ, Norbom LB, Quraishi SH, Tagliazucchi E, Laufs H, Bjørnerud A, Malt UF, Andreassen OA, Roussos E, Duff EP, Smith SM, Groote IR, Westlye LT. PMID: 26712339; PMCID: PMC6600874.
      View in: PubMed   Mentions: 49     Fields:    Translation:Humans
    60. A positive-negative mode of population covariation links brain connectivity, demographics and behavior. Nat Neurosci. 2015 Nov; 18(11):1565-7. Smith SM, Nichols TE, Vidaurre D, Winkler AM, Behrens TE, Glasser MF, Ugurbil K, Barch DM, Van Essen DC, Miller KL. PMID: 26414616; PMCID: PMC4625579.
      View in: PubMed   Mentions: 364     Fields:    Translation:Humans
    61. Multi-level block permutation. Neuroimage. 2015 Dec; 123:253-68. Winkler AM, Webster MA, Vidaurre D, Nichols TE, Smith SM. PMID: 26074200; PMCID: PMC4644991.
      View in: PubMed   Mentions: 120     Fields:    Translation:Humans
    62. Large-scale probabilistic functional modes from resting state fMRI. Neuroimage. 2015 Apr 01; 109:217-31. Harrison SJ, Woolrich MW, Robinson EC, Glasser MF, Beckmann CF, Jenkinson M, Smith SM. PMID: 25598050; PMCID: PMC4349633.
      View in: PubMed   Mentions: 52     Fields:    Translation:Humans
    63. Attentional load modulates large-scale functional brain connectivity beyond the core attention networks. Neuroimage. 2015 Apr 01; 109:260-72. Alnæs D, Kaufmann T, Richard G, Duff EP, Sneve MH, Endestad T, Nordvik JE, Andreassen OA, Smith SM, Westlye LT. PMID: 25595500.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    64. A common brain network links development, aging, and vulnerability to disease. Proc Natl Acad Sci U S A. 2014 Dec 09; 111(49):17648-53. Douaud G, Groves AR, Tamnes CK, Westlye LT, Duff EP, Engvig A, Walhovd KB, James A, Gass A, Monsch AU, Matthews PM, Fjell AM, Smith SM, Johansen-Berg H. PMID: 25422429; PMCID: PMC4267352.
      View in: PubMed   Mentions: 142     Fields:    Translation:Humans
    65. Group-PCA for very large fMRI datasets. Neuroimage. 2014 Nov 01; 101:738-49. Smith SM, Hyvärinen A, Varoquaux G, Miller KL, Beckmann CF. PMID: 25094018; PMCID: PMC4289914.
      View in: PubMed   Mentions: 104     Fields:    Translation:Humans
    66. MSM: a new flexible framework for Multimodal Surface Matching. Neuroimage. 2014 Oct 15; 100:414-26. Robinson EC, Jbabdi S, Glasser MF, Andersson J, Burgess GC, Harms MP, Smith SM, Van Essen DC, Jenkinson M. PMID: 24939340; PMCID: PMC4190319.
      View in: PubMed   Mentions: 287     Fields:    Translation:Humans
    67. Study protocol: The Whitehall II imaging sub-study. BMC Psychiatry. 2014 May 30; 14:159. Filippini N, Zsoldos E, Haapakoski R, Sexton CE, Mahmood A, Allan CL, Topiwala A, Valkanova V, Brunner EJ, Shipley MJ, Auerbach E, Moeller S, Ugurbil K, Xu J, Yacoub E, Andersson J, Bijsterbosch J, Clare S, Griffanti L, Hess AT, Jenkinson M, Miller KL, Salimi-Khorshidi G, Sotiropoulos SN, Voets NL, Smith SM, Geddes JR, Singh-Manoux A, Mackay CE, Kivimäki M, Ebmeier KP. PMID: 24885374; PMCID: PMC4048583.
      View in: PubMed   Mentions: 49     Fields:    Translation:Humans
    68. Local GABA concentration is related to network-level resting functional connectivity. Elife. 2014 Mar 25; 3:e01465. Stagg CJ, Bachtiar V, Amadi U, Gudberg CA, Ilie AS, Sampaio-Baptista C, O'Shea J, Woolrich M, Smith SM, Filippini N, Near J, Johansen-Berg H. PMID: 24668166; PMCID: PMC3964822.
      View in: PubMed   Mentions: 98     Fields:    Translation:HumansCells
    69. Fast transient networks in spontaneous human brain activity. Elife. 2014 Mar 25; 3:e01867. Baker AP, Brookes MJ, Rezek IA, Smith SM, Behrens T, Probert Smith PJ, Woolrich M. PMID: 24668169; PMCID: PMC3965210.
      View in: PubMed   Mentions: 225     Fields:    Translation:Humans
    70. ICA-based artefact removal and accelerated fMRI acquisition for improved resting state network imaging. Neuroimage. 2014 Jul 15; 95:232-47. Griffanti L, Salimi-Khorshidi G, Beckmann CF, Auerbach EJ, Douaud G, Sexton CE, Zsoldos E, Ebmeier KP, Filippini N, Mackay CE, Moeller S, Xu J, Yacoub E, Baselli G, Ugurbil K, Miller KL, Smith SM. PMID: 24657355; PMCID: PMC4154346.
      View in: PubMed   Mentions: 597     Fields:    Translation:Humans
    71. Permutation inference for the general linear model. Neuroimage. 2014 May 15; 92:381-97. Winkler AM, Ridgway GR, Webster MA, Smith SM, Nichols TE. PMID: 24530839; PMCID: PMC4010955.
      View in: PubMed   Mentions: 1642     Fields:    Translation:HumansAnimals
    72. Automatic denoising of functional MRI data: combining independent component analysis and hierarchical fusion of classifiers. Neuroimage. 2014 Apr 15; 90:449-68. Salimi-Khorshidi G, Douaud G, Beckmann CF, Glasser MF, Griffanti L, Smith SM. PMID: 24389422; PMCID: PMC4019210.
      View in: PubMed   Mentions: 795     Fields:    Translation:Humans
    73. Functional connectomics from resting-state fMRI. Trends Cogn Sci. 2013 Dec; 17(12):666-82. Smith SM, Vidaurre D, Beckmann CF, Glasser MF, Jenkinson M, Miller KL, Nichols TE, Robinson EC, Salimi-Khorshidi G, Woolrich MW, Barch DM, Ugurbil K, Van Essen DC. PMID: 24238796; PMCID: PMC4004765.
      View in: PubMed   Mentions: 433     Fields:    Translation:HumansAnimals
    74. Evaluation of slice accelerations using multiband echo planar imaging at 3 T. Neuroimage. 2013 Dec; 83:991-1001. Xu J, Moeller S, Auerbach EJ, Strupp J, Smith SM, Feinberg DA, Yacoub E, Ugurbil K. PMID: 23899722; PMCID: PMC3815955.
      View in: PubMed   Mentions: 245     Fields:    Translation:Humans
    75. Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project. Neuroimage. 2013 Oct 15; 80:80-104. Ugurbil K, Xu J, Auerbach EJ, Moeller S, Vu AT, Duarte-Carvajalino JM, Lenglet C, Wu X, Schmitter S, Van de Moortele PF, Strupp J, Sapiro G, De Martino F, Wang D, Harel N, Garwood M, Chen L, Feinberg DA, Smith SM, Miller KL, Sotiropoulos SN, Jbabdi S, Andersson JL, Behrens TE, Glasser MF, Van Essen DC, Yacoub E, WU-Minn HCP Consortium. PMID: 23702417; PMCID: PMC3740184.
      View in: PubMed   Mentions: 420     Fields:    Translation:HumansAnimals
    76. Resting-state fMRI in the Human Connectome Project. Neuroimage. 2013 Oct 15; 80:144-68. Smith SM, Beckmann CF, Andersson J, Auerbach EJ, Bijsterbosch J, Douaud G, Duff E, Feinberg DA, Griffanti L, Harms MP, Kelly M, Laumann T, Miller KL, Moeller S, Petersen S, Power J, Salimi-Khorshidi G, Snyder AZ, Vu AT, Woolrich MW, Xu J, Yacoub E, Ugurbil K, Van Essen DC, Glasser MF, WU-Minn HCP Consortium. PMID: 23702415; PMCID: PMC3720828.
      View in: PubMed   Mentions: 697     Fields:    Translation:Humans
    77. The WU-Minn Human Connectome Project: an overview. Neuroimage. 2013 Oct 15; 80:62-79. Van Essen DC, Smith SM, Barch DM, Behrens TE, Yacoub E, Ugurbil K, WU-Minn HCP Consortium. PMID: 23684880; PMCID: PMC3724347.
      View in: PubMed   Mentions: 2057     Fields:    Translation:Humans
    78. Improving alignment in Tract-based spatial statistics: evaluation and optimization of image registration. Neuroimage. 2013 Aug 01; 76:400-11. de Groot M, Vernooij MW, Klein S, Ikram MA, Vos FM, Smith SM, Niessen WJ, Andersson JL. PMID: 23523807; PMCID: PMC6588540.
      View in: PubMed   Mentions: 88     Fields:    Translation:Humans
    79. Spatially constrained hierarchical parcellation of the brain with resting-state fMRI. Neuroimage. 2013 Aug 01; 76:313-24. Blumensath T, Jbabdi S, Glasser MF, Van Essen DC, Ugurbil K, Behrens TE, Smith SM. PMID: 23523803; PMCID: PMC3758955.
      View in: PubMed   Mentions: 104     Fields:    Translation:Humans
    80. Benefits of multi-modal fusion analysis on a large-scale dataset: life-span patterns of inter-subject variability in cortical morphometry and white matter microstructure. Neuroimage. 2012 Oct 15; 63(1):365-80. Groves AR, Smith SM, Fjell AM, Tamnes CK, Walhovd KB, Douaud G, Woolrich MW, Westlye LT. PMID: 22750721.
      View in: PubMed   Mentions: 68     Fields:    Translation:HumansCells
    81. Temporally-independent functional modes of spontaneous brain activity. Proc Natl Acad Sci U S A. 2012 Feb 21; 109(8):3131-6. Smith SM, Miller KL, Moeller S, Xu J, Auerbach EJ, Woolrich MW, Beckmann CF, Jenkinson M, Andersson J, Glasser MF, Van Essen DC, Feinberg DA, Yacoub ES, Ugurbil K. PMID: 22323591; PMCID: PMC3286957.
      View in: PubMed   Mentions: 385     Fields:    Translation:Humans
    82. The future of FMRI connectivity. Neuroimage. 2012 Aug 15; 62(2):1257-66. Smith SM. PMID: 22248579.
      View in: PubMed   Mentions: 159     Fields:    Translation:HumansAnimals
    83. Task-driven ICA feature generation for accurate and interpretable prediction using fMRI. Neuroimage. 2012 Mar; 60(1):189-203. Duff EP, Trachtenberg AJ, Mackay CE, Howard MA, Wilson F, Smith SM, Woolrich MW. PMID: 22227050.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    84. FSL. Neuroimage. 2012 Aug 15; 62(2):782-90. Jenkinson M, Beckmann CF, Behrens TE, Woolrich MW, Smith SM. PMID: 21979382.
      View in: PubMed   Mentions: 4857     Fields:    Translation:Humans
    85. Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner. Neuroimage. 2011 Jul 01; 57(1):167-181. Miller KL, Stagg CJ, Douaud G, Jbabdi S, Smith SM, Behrens TEJ, Jenkinson M, Chance SA, Esiri MM, Voets NL, Jenkinson N, Aziz TZ, Turner MR, Johansen-Berg H, McNab JA. PMID: 21473920; PMCID: PMC3115068.
      View in: PubMed   Mentions: 134     Fields:    Translation:Humans
    86. A Bayesian model of shape and appearance for subcortical brain segmentation. Neuroimage. 2011 Jun 01; 56(3):907-22. Patenaude B, Smith SM, Kennedy DN, Jenkinson M. PMID: 21352927; PMCID: PMC3417233.
      View in: PubMed   Mentions: 1046     Fields:    Translation:Humans
    87. Spectral characteristics of resting state networks. Prog Brain Res. 2011; 193:259-76. Niazy RK, Xie J, Miller K, Beckmann CF, Smith SM. PMID: 21854968.
      View in: PubMed   Mentions: 102     Fields:    Translation:Humans
    88. Multiplexed echo planar imaging for sub-second whole brain FMRI and fast diffusion imaging. PLoS One. 2010 Dec 20; 5(12):e15710. Feinberg DA, Moeller S, Smith SM, Auerbach E, Ramanna S, Gunther M, Glasser MF, Miller KL, Ugurbil K, Yacoub E. PMID: 21187930; PMCID: PMC3004955.
      View in: PubMed   Mentions: 644     Fields:    Translation:HumansCells
    89. Adjusting the effect of nonstationarity in cluster-based and TFCE inference. Neuroimage. 2011 Feb 01; 54(3):2006-19. Salimi-Khorshidi G, Smith SM, Nichols TE. PMID: 20955803.
      View in: PubMed   Mentions: 75     Fields:    Translation:Humans
    90. Network modelling methods for FMRI. Neuroimage. 2011 Jan 15; 54(2):875-91. Smith SM, Miller KL, Salimi-Khorshidi G, Webster M, Beckmann CF, Nichols TE, Ramsey JD, Woolrich MW. PMID: 20817103.
      View in: PubMed   Mentions: 804     Fields:    Translation:Humans
    91. Crossing fibres in tract-based spatial statistics. Neuroimage. 2010 Jan 01; 49(1):249-56. Jbabdi S, Behrens TE, Smith SM. PMID: 19712743.
      View in: PubMed   Mentions: 97     Fields:    Translation:HumansCells
    92. White matter tract integrity in aging and Alzheimer's disease. Hum Brain Mapp. 2009 Apr; 30(4):1051-9. Damoiseaux JS, Smith SM, Witter MP, Sanz-Arigita EJ, Barkhof F, Scheltens P, Stam CJ, Zarei M, Rombouts SA. PMID: 18412132; PMCID: PMC6870688.
      View in: PubMed   Mentions: 110     Fields:    Translation:Humans
    93. Model-free group analysis shows altered BOLD FMRI networks in dementia. Hum Brain Mapp. 2009 Jan; 30(1):256-66. Rombouts SA, Damoiseaux JS, Goekoop R, Barkhof F, Scheltens P, Smith SM, Beckmann CF. PMID: 18041738; PMCID: PMC6870626.
      View in: PubMed   Mentions: 58     Fields:    Translation:Humans
    94. Meta-analysis of neuroimaging data: a comparison of image-based and coordinate-based pooling of studies. Neuroimage. 2009 Apr 15; 45(3):810-23. Salimi-Khorshidi G, Smith SM, Keltner JR, Wager TD, Nichols TE. PMID: 19166944.
      View in: PubMed   Mentions: 161     Fields:    Translation:Humans
    95. Bayesian analysis of neuroimaging data in FSL. Neuroimage. 2009 Mar; 45(1 Suppl):S173-86. Woolrich MW, Jbabdi S, Patenaude B, Chappell M, Makni S, Behrens T, Beckmann C, Jenkinson M, Smith SM. PMID: 19059349.
      View in: PubMed   Mentions: 1133     Fields:    Translation:Humans
    96. Threshold-free cluster enhancement: addressing problems of smoothing, threshold dependence and localisation in cluster inference. Neuroimage. 2009 Jan 01; 44(1):83-98. Smith SM, Nichols TE. PMID: 18501637.
      View in: PubMed   Mentions: 2470     Fields:    Translation:Humans
    97. Enhanced brain extraction improves the accuracy of brain atrophy estimation. Neuroimage. 2008 Apr 01; 40(2):583-589. Battaglini M, Smith SM, Brogi S, De Stefano N. PMID: 18255315.
      View in: PubMed   Mentions: 26     Fields:    Translation:Humans
    98. Regional brain atrophy development is related to specific aspects of clinical dysfunction in multiple sclerosis. Neuroimage. 2007 Nov 15; 38(3):529-37. Jasperse B, Vrenken H, Sanz-Arigita E, de Groot V, Smith SM, Polman CH, Barkhof F. PMID: 17889567.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    99. Signal and noise characteristics of SSFP FMRI: a comparison with GRE at multiple field strengths. Neuroimage. 2007 Oct 01; 37(4):1227-36. Miller KL, Smith SM, Jezzard P, Wiggins GC, Wiggins CJ. PMID: 17706432.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    100. Longitudinal and cross-sectional analysis of atrophy in Alzheimer's disease: cross-validation of BSI, SIENA and SIENAX. Neuroimage. 2007 Jul 15; 36(4):1200-6. Smith SM, Rao A, De Stefano N, Jenkinson M, Schott JM, Matthews PM, Fox NC. PMID: 17537648.
      View in: PubMed   Mentions: 48     Fields:    Translation:Humans
    101. Integrity of white matter in the corpus callosum correlates with bimanual co-ordination skills. Neuroimage. 2007; 36 Suppl 2:T16-21. Johansen-Berg H, Della-Maggiore V, Behrens TE, Smith SM, Paus T. PMID: 17499163; PMCID: PMC3119816.
      View in: PubMed   Mentions: 106     Fields:    Translation:Humans
    102. Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data. Neuroimage. 2006 Jul 15; 31(4):1487-505. Smith SM, Jenkinson M, Johansen-Berg H, Rueckert D, Nichols TE, Mackay CE, Watkins KE, Ciccarelli O, Cader MZ, Matthews PM, Behrens TE. PMID: 16624579.
      View in: PubMed   Mentions: 3152     Fields:    Translation:Humans
    103. Multilevel linear modelling for FMRI group analysis using Bayesian inference. Neuroimage. 2004 Apr; 21(4):1732-47. Woolrich MW, Behrens TE, Beckmann CF, Jenkinson M, Smith SM. PMID: 15050594.
      View in: PubMed   Mentions: 782     Fields:    Translation:Humans
    104. Constrained linear basis sets for HRF modelling using Variational Bayes. Neuroimage. 2004 Apr; 21(4):1748-61. Woolrich MW, Behrens TE, Smith SM. PMID: 15050595.
      View in: PubMed   Mentions: 109     Fields:    Translation:Humans
    105. Advances in functional and structural MR image analysis and implementation as FSL. Neuroimage. 2004; 23 Suppl 1:S208-19. Smith SM, Jenkinson M, Woolrich MW, Beckmann CF, Behrens TE, Johansen-Berg H, Bannister PR, De Luca M, Drobnjak I, Flitney DE, Niazy RK, Saunders J, Vickers J, Zhang Y, De Stefano N, Brady JM, Matthews PM. PMID: 15501092.
      View in: PubMed   Mentions: 6244     Fields:    Translation:Humans
    106. General multilevel linear modeling for group analysis in FMRI. Neuroimage. 2003 Oct; 20(2):1052-63. Beckmann CF, Jenkinson M, Smith SM. PMID: 14568475.
      View in: PubMed   Mentions: 714     Fields:    Translation:Humans
    107. On bias in the estimation of autocorrelations for fMRI voxel time-series analysis. Neuroimage. 2003 Jan; 18(1):83-90. Marchini JL, Smith SM. PMID: 12507446.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    108. Accurate, robust, and automated longitudinal and cross-sectional brain change analysis. Neuroimage. 2002 Sep; 17(1):479-89. Smith SM, Zhang Y, Jenkinson M, Chen J, Matthews PM, Federico A, De Stefano N. PMID: 12482100.
      View in: PubMed   Mentions: 852     Fields:    Translation:Humans
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