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Buonomano, Dean

Title(s)Professor, Neurobiology
Phone45009, 45012
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    Collapse Research Activities and Funding
    Multiplexing working memory and timing: Encoding retrospective and prospective information in transient neural trajectories.
    NIH/NINDS R01NS116589Apr 15, 2020 - Mar 31, 2025
    Role: Principal Investigator
    CRCNS: Network mechanisms of the learning and encoding of timed motor responses
    NIH/NINDS R01NS100050Jul 1, 2016 - Jun 30, 2021
    Role: Principal Investigator
    Abnormal network dynamics and "learning" in neural circuits from Fmr1-/- mice
    NIH/NIMH R21MH097093Sep 19, 2012 - Aug 31, 2014
    Role: Principal Investigator
    Learning temporal patterns: computational and experimental studies of timing
    NIH/NINDS R03NS077340Jul 1, 2012 - Jun 30, 2014
    Role: Principal Investigator
    Computations and Unsupervised Learning in Recurrent Neural Networks
    NIH/NIMH R03MH076888Jul 3, 2007 - Jun 30, 2010
    Role: Principal Investigator
    TIMING AND LEARNING IN IN VITRO CORTICAL NETWORKS
    NIH/NIMH R01MH060163Sep 22, 2001 - Mar 31, 2012
    Role: Principal Investigator
    CORTICAL CONDITIONING OF SOMATOTOPIC RECEPTIVE FIELDS
    NIH/NIMH F32MH010431Jun 23, 1993
    Role: Principal Investigator
    LONG-TERM ASSOCIATIVE NEURAL PLASTICITY IN APLYSIA
    NIH/NIMH F31MH009895Mar 12, 1990
    Role: Principal Investigator

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    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Hardy NF, Goudar V, Romero-Sosa JL, Buonomano DV. A model of temporal scaling correctly predicts that motor timing improves with speed. Nat Commun. 2018 11 09; 9(1):4732. PMID: 30413692.
      View in: PubMed
    2. Motanis H, Seay MJ, Buonomano DV. Short-Term Synaptic Plasticity as a Mechanism for Sensory Timing. Trends Neurosci. 2018 10; 41(10):701-711. PMID: 30274605.
      View in: PubMed
    3. Paton JJ, Buonomano DV. The Neural Basis of Timing: Distributed Mechanisms for Diverse Functions. Neuron. 2018 05 16; 98(4):687-705. PMID: 29772201.
      View in: PubMed
    4. Goudar V, Buonomano DV. Encoding sensory and motor patterns as time-invariant trajectories in recurrent neural networks. Elife. 2018 03 14; 7. PMID: 29537963.
      View in: PubMed
    5. Hardy NF, Buonomano DV. Encoding Time in Feedforward Trajectories of a Recurrent Neural Network Model. Neural Comput. 2018 02; 30(2):378-396. PMID: 29162002.
      View in: PubMed
    6. Bakhurin KI, Goudar V, Shobe JL, Claar LD, Buonomano DV, Masmanidis SC. Differential Encoding of Time by Prefrontal and Striatal Network Dynamics. J Neurosci. 2017 01 25; 37(4):854-870. PMID: 28123021.
      View in: PubMed
    7. Goel A, Buonomano DV. Temporal Interval Learning in Cortical Cultures Is Encoded in Intrinsic Network Dynamics. Neuron. 2016 07 20; 91(2):320-7. PMID: 27346530.
      View in: PubMed
    8. Hardy NF, Buonomano DV. Neurocomputational Models of Interval and Pattern Timing. Curr Opin Behav Sci. 2016 Apr; 8:250-257. PMID: 27790629.
      View in: PubMed
    9. Finnerty GT, Shadlen MN, Jazayeri M, Nobre AC, Buonomano DV. Time in Cortical Circuits. J Neurosci. 2015 Oct 14; 35(41):13912-6. PMID: 26468192.
      View in: PubMed
    10. Motanis H, Buonomano D. Delayed in vitro development of Up states but normal network plasticity in Fragile X circuits. Eur J Neurosci. 2015 Sep; 42(6):2312-21. PMID: 26138886.
      View in: PubMed
    11. Shtrahman M, Aharoni DB, Hardy NF, Buonomano DV, Arisaka K, Otis TS. Multifocal fluorescence microscope for fast optical recordings of neuronal action potentials. Biophys J. 2015 Feb 03; 108(3):520-9. PMID: 25650920.
      View in: PubMed
    12. Goudar V, Buonomano DV. A model of order-selectivity based on dynamic changes in the balance of excitation and inhibition produced by short-term synaptic plasticity. J Neurophysiol. 2015 Jan 15; 113(2):509-23. PMID: 25339707.
      View in: PubMed
    13. Goel A, Buonomano DV. Timing as an intrinsic property of neural networks: evidence from in vivo and in vitro experiments. Philos Trans R Soc Lond B Biol Sci. 2014 Mar 05; 369(1637):20120460. PMID: 24446494.
      View in: PubMed
    14. Buonomano DV. Neural dynamics based timing in the subsecond to seconds range. Adv Exp Med Biol. 2014; 829:101-17. PMID: 25358707.
      View in: PubMed
    15. Laje R, Buonomano DV. Robust timing and motor patterns by taming chaos in recurrent neural networks. Nat Neurosci. 2013 Jul; 16(7):925-33. PMID: 23708144.
      View in: PubMed
    16. Goel A, Buonomano DV. Chronic electrical stimulation homeostatically decreases spontaneous activity, but paradoxically increases evoked network activity. J Neurophysiol. 2013 Apr; 109(7):1824-36. PMID: 23324317.
      View in: PubMed
    17. Lee TP, Buonomano DV. Unsupervised formation of vocalization-sensitive neurons: a cortical model based on short-term and homeostatic plasticity. Neural Comput. 2012 Oct; 24(10):2579-603. PMID: 22845822.
      View in: PubMed
    18. Laje R, Cheng K, Buonomano DV. Learning of temporal motor patterns: an analysis of continuous versus reset timing. Front Integr Neurosci. 2011; 5:61. PMID: 22016724.
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    19. Carvalho TP, Buonomano DV. A novel learning rule for long-term plasticity of short-term synaptic plasticity enhances temporal processing. Front Integr Neurosci. 2011; 5:20. PMID: 21660100.
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    20. Buonomano DV, Laje R. Population clocks: motor timing with neural dynamics. Trends Cogn Sci. 2010 Dec; 14(12):520-7. PMID: 20889368.
      View in: PubMed
    21. Johnson HA, Goel A, Buonomano DV. Neural dynamics of in vitro cortical networks reflects experienced temporal patterns. Nat Neurosci. 2010 Aug; 13(8):917-9. PMID: 20543842.
      View in: PubMed
    22. Liu JK, Buonomano DV. Embedding multiple trajectories in simulated recurrent neural networks in a self-organizing manner. J Neurosci. 2009 Oct 21; 29(42):13172-81. PMID: 19846705.
      View in: PubMed
    23. Buonomano DV. Harnessing chaos in recurrent neural networks. Neuron. 2009 Aug 27; 63(4):423-5. PMID: 19709625.
      View in: PubMed
    24. Buonomano DV, Bramen J, Khodadadifar M. Influence of the interstimulus interval on temporal processing and learning: testing the state-dependent network model. Philos Trans R Soc Lond B Biol Sci. 2009 Jul 12; 364(1525):1865-73. PMID: 19487189.
      View in: PubMed
    25. Carvalho TP, Buonomano DV. Differential effects of excitatory and inhibitory plasticity on synaptically driven neuronal input-output functions. Neuron. 2009 Mar 12; 61(5):774-85. PMID: 19285473.
      View in: PubMed
    26. Buonomano DV, Maass W. State-dependent computations: spatiotemporal processing in cortical networks. Nat Rev Neurosci. 2009 Feb; 10(2):113-25. PMID: 19145235.
      View in: PubMed
    27. Johnson HA, Buonomano DV. A method for chronic stimulation of cortical organotypic cultures using implanted electrodes. J Neurosci Methods. 2009 Jan 30; 176(2):136-43. PMID: 18835297.
      View in: PubMed
    28. Buonomano DV. The biology of time across different scales. Nat Chem Biol. 2007 Oct; 3(10):594-7. PMID: 17876310.
      View in: PubMed
    29. Johnson HA, Buonomano DV. Development and plasticity of spontaneous activity and Up states in cortical organotypic slices. J Neurosci. 2007 May 30; 27(22):5915-25. PMID: 17537962.
      View in: PubMed
    30. Karmarkar UR, Buonomano DV. Timing in the absence of clocks: encoding time in neural network states. Neuron. 2007 Feb 01; 53(3):427-38. PMID: 17270738.
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    31. Karmarkar UR, Buonomano DV. Different forms of homeostatic plasticity are engaged with distinct temporal profiles. Eur J Neurosci. 2006 Mar; 23(6):1575-84. PMID: 16553621.
      View in: PubMed
    32. Eagleman DM, Tse PU, Buonomano D, Janssen P, Nobre AC, Holcombe AO. Time and the brain: how subjective time relates to neural time. J Neurosci. 2005 Nov 09; 25(45):10369-71. PMID: 16280574.
      View in: PubMed
    33. Buonomano DV. A learning rule for the emergence of stable dynamics and timing in recurrent networks. J Neurophysiol. 2005 Oct; 94(4):2275-83. PMID: 16160088.
      View in: PubMed
    34. Dong HW, Buonomano DV. A technique for repeated recordings in cortical organotypic slices. J Neurosci Methods. 2005 Jul 15; 146(1):69-75. PMID: 15935222.
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    35. Marder CP, Buonomano DV. Timing and balance of inhibition enhance the effect of long-term potentiation on cell firing. J Neurosci. 2004 Oct 06; 24(40):8873-84. PMID: 15470154.
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    36. Mauk MD, Buonomano DV. The neural basis of temporal processing. Annu Rev Neurosci. 2004; 27:307-40. PMID: 15217335.
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    37. Buonomano DV. Timing of neural responses in cortical organotypic slices. Proc Natl Acad Sci U S A. 2003 Apr 15; 100(8):4897-902. PMID: 12668762.
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    38. Karmarkar UR, Buonomano DV. Temporal specificity of perceptual learning in an auditory discrimination task. Learn Mem. 2003 Mar-Apr; 10(2):141-7. PMID: 12663752.
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    39. Marder CP, Buonomano DV. Differential effects of short- and long-term potentiation on cell firing in the CA1 region of the hippocampus. J Neurosci. 2003 Jan 01; 23(1):112-21. PMID: 12514207.
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    40. Karmarkar UR, Najarian MT, Buonomano DV. Mechanisms and significance of spike-timing dependent plasticity. Biol Cybern. 2002 Dec; 87(5-6):373-82. PMID: 12461627.
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    41. Karmarkar UR, Buonomano DV. A model of spike-timing dependent plasticity: one or two coincidence detectors? J Neurophysiol. 2002 Jul; 88(1):507-13. PMID: 12091572.
      View in: PubMed
    42. Buonomano DV, Karmarkar UR. How do we tell time? Neuroscientist. 2002 Feb; 8(1):42-51. PMID: 11843098.
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    43. Buonomano DV. Decoding temporal information: A model based on short-term synaptic plasticity. J Neurosci. 2000 Feb 01; 20(3):1129-41. PMID: 10648718.
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    44. Buonomano DV, Merzenich M. A neural network model of temporal code generation and position-invariant pattern recognition. Neural Comput. 1999 Jan 01; 11(1):103-16. PMID: 9950725.
      View in: PubMed