Kirk Edward Lohmueller

Title(s)Professor, Ecology And Evolutionary Biology
SchoolCollege of Letters and Science
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    Other Positions
    Title(s)Professor, Human Genetics


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    QUANTIFYING THE IMPACT OF CIRCADIAN DISRUPTION ON GENOME STABILITY
    NIH R21ES031000Aug 15, 2019 - Jul 31, 2021
    Role: Co-Principal Investigator
    Population genomics of the selective effects of new mutations
    NIH R35GM119856Sep 1, 2016 - May 31, 2026
    Role: Principal Investigator
    Population genetics of deleterious polymorphism in human populations
    NIH F32HG005308Jan 1, 2010 - Jun 30, 2010
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    1. The influence of gene flow on population viability in an isolated urban caracal population. Mol Ecol. 2024 Apr 05; e17346. Kyriazis CC, Serieys LEK, Bishop JM, Drouilly M, Viljoen S, Wayne RK, Lohmueller KE. PMID: 38581173.
      View in: PubMed   Mentions:
    2. Constraining models of dominance for nonsynonymous mutations in the human genome. bioRxiv. 2024 Feb 26. Kyriazis CC, Lohmueller KE. PMID: 38463985; PMCID: PMC10925099.
      View in: PubMed   Mentions:
    3. The impact of non-neutral synonymous mutations when inferring selection on non-synonymous mutations. bioRxiv. 2024 Feb 08. Zurita AMI, Kyriazis CC, Lohmueller KE. PMID: 38370782; PMCID: PMC10871344.
      View in: PubMed   Mentions:
    4. Inference of the demographic histories and selective effects of human gut commensal microbiota over the course of human history. bioRxiv. 2023 Nov 13. Mah JC, Lohmueller KE, Garud N. PMID: 38014007; PMCID: PMC10680615.
      View in: PubMed   Mentions:
    5. Using Computational Simulations to Model Deleterious Variation and Genetic Load in Natural Populations. Am Nat. 2023 12; 202(6):737-752. Kyriazis CC, Robinson JA, Lohmueller KE. PMID: 38033186; PMCID: PMC10897732.
      View in: PubMed   Mentions: 2     Fields:    
    6. The genomic footprint of whaling and isolation in fin whale populations. Nat Commun. 2023 09 12; 14(1):5465. Nigenda-Morales SF, Lin M, Nuñez-Valencia PG, Kyriazis CC, Beichman AC, Robinson JA, Ragsdale AP, Urbán R J, Archer FI, Viloria-Gómora L, Pérez-Álvarez MJ, Poulin E, Lohmueller KE, Moreno-Estrada A, Wayne RK. PMID: 37699896; PMCID: PMC10497599.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimals
    7. Quantifying the fraction of new mutations that are recessive lethal. Evolution. 2023 Jun 29; 77(7):1539-1549. Wade EE, Kyriazis CC, Cavassim MIA, Lohmueller KE. PMID: 37074880; PMCID: PMC10309970.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimals
    8. Inferring the mode and strength of ongoing selection. Genome Res. 2023 04; 33(4):632-643. Barroso GV, Lohmueller KE. PMID: 37055196; PMCID: PMC10234300.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    9. Remembering distinguished professor Robert K. Wayne. Mol Ecol. 2023 May; 32(9):2364-2368. Leonard JA, von Holdt B, Smith TB, Sork VL, Shapiro B, Ostrander EA, Rieseberg LH, Van Valkenburgh B, Lohmueller KE. PMID: 36991555.
      View in: PubMed   Mentions:    Fields:    
    10. Models based on best-available information support a low inbreeding load and potential for recovery in the vaquita. Heredity (Edinb). 2023 04; 130(4):183-187. Kyriazis CC, Robinson JA, Nigenda-Morales SF, Beichman AC, Rojas-Bracho L, Robertson KM, Fontaine MC, Wayne RK, Taylor BL, Lohmueller KE, Morin PA. PMID: 36941409; PMCID: PMC10076335.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    11. Genomic Underpinnings of Population Persistence in Isle Royale Moose. Mol Biol Evol. 2023 02 03; 40(2). Kyriazis CC, Beichman AC, Brzeski KE, Hoy SR, Peterson RO, Vucetich JA, Vucetich LM, Lohmueller KE, Wayne RK. PMID: 36729989; PMCID: PMC9927576.
      View in: PubMed   Mentions: 6     Fields:    Translation:Animals
    12. Long-term Small Population Size, Deleterious Variation, and Altitude Adaptation in the Ethiopian Wolf, a Severely Endangered Canid. Mol Biol Evol. 2023 01 04; 40(1). Mooney JA, Marsden CD, Yohannes A, Wayne RK, Lohmueller KE. PMID: 36585842; PMCID: PMC9847632.
      View in: PubMed   Mentions: 3     Fields:    Translation:Animals
    13. MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations. Mol Biol Evol. 2023 01 04; 40(1). Zhang X, Kim B, Singh A, Sankararaman S, Durvasula A, Lohmueller KE. PMID: 36617238; PMCID: PMC9887621.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimals
    14. Deleterious Variation in Natural Populations and Implications for Conservation Genetics. Annu Rev Anim Biosci. 2023 02 15; 11:93-114. Robinson J, Kyriazis CC, Yuan SC, Lohmueller KE. PMID: 36332644; PMCID: PMC9933137.
      View in: PubMed   Mentions: 12     Fields:    Translation:Animals
    15. On the prospect of achieving accurate joint estimation of selection with population history. Genome Biol Evol. 2022 07 02; 14(7). Johri P, Eyre-Walker A, Gutenkunst RN, Lohmueller KE, Jensen JD. PMID: 35675379; PMCID: PMC9254643.
      View in: PubMed   Mentions: 19     Fields:    
    16. The critically endangered vaquita is not doomed to extinction by inbreeding depression. Science. 2022 05 06; 376(6593):635-639. Robinson JA, Kyriazis CC, Nigenda-Morales SF, Beichman AC, Rojas-Bracho L, Robertson KM, Fontaine MC, Wayne RK, Lohmueller KE, Taylor BL, Morin PA. PMID: 35511971; PMCID: PMC9881057.
      View in: PubMed   Mentions: 25     Fields:    Translation:Animals
    17. High-quality genome and methylomes illustrate features underlying evolutionary success of oaks. Nat Commun. 2022 04 19; 13(1):2047. Sork VL, Cokus SJ, Fitz-Gibbon ST, Zimin AV, Puiu D, Garcia JA, Gugger PF, Henriquez CL, Zhen Y, Lohmueller KE, Pellegrini M, Salzberg SL. PMID: 35440538; PMCID: PMC9018854.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansAnimalsCells
    18. Haplotype-based inference of the distribution of fitness effects. Genetics. 2022 04 04; 220(4). Ortega-Del Vecchyo D, Lohmueller KE, Novembre J. PMID: 35100400; PMCID: PMC8982047.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    19. Genomic analyses reveal range-wide devastation of sea otter populations. Mol Ecol. 2023 01; 32(2):281-298. Beichman AC, Kalhori P, Kyriazis CC, DeVries AA, Nigenda-Morales S, Heckel G, Schramm Y, Moreno-Estrada A, Kennett DJ, Hylkema M, Bodkin J, Koepfli KP, Lohmueller KE, Wayne RK. PMID: 34967471; PMCID: PMC9875727.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimals
    20. A signature of Neanderthal introgression on molecular mechanisms of environmental responses. PLoS Genet. 2021 09; 17(9):e1009493. Findley AS, Zhang X, Boye C, Lin YL, Kalita CA, Barreiro L, Lohmueller KE, Pique-Regi R, Luca F. PMID: 34570765; PMCID: PMC8509894.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    21. Negative linkage disequilibrium between amino acid changing variants reveals interference among deleterious mutations in the human genome. PLoS Genet. 2021 07; 17(7):e1009676. Garcia JA, Lohmueller KE. PMID: 34319975; PMCID: PMC8351996.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    22. The impact of identity by descent on fitness and disease in dogs. Proc Natl Acad Sci U S A. 2021 04 20; 118(16). Mooney JA, Yohannes A, Lohmueller KE. PMID: 33853941; PMCID: PMC8072400.
      View in: PubMed   Mentions: 10     Fields:    Translation:Animals
    23. Negative selection on complex traits limits phenotype prediction accuracy between populations. Am J Hum Genet. 2021 04 01; 108(4):620-631. Durvasula A, Lohmueller KE. PMID: 33691092; PMCID: PMC8059340.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    24. Patterns of de novo tandem repeat mutations and their role in autism. Nature. 2021 01; 589(7841):246-250. Mitra I, Huang B, Mousavi N, Ma N, Lamkin M, Yanicky R, Shleizer-Burko S, Lohmueller KE, Gymrek M. PMID: 33442040; PMCID: PMC7810352.
      View in: PubMed   Mentions: 57     Fields:    Translation:HumansCells
    25. Strongly deleterious mutations are a primary determinant of extinction risk due to inbreeding depression. Evol Lett. 2021 Feb; 5(1):33-47. Kyriazis CC, Wayne RK, Lohmueller KE. PMID: 33552534; PMCID: PMC7857301.
      View in: PubMed   Mentions: 50  
    26. Identification and characterization of constrained non-exonic bases lacking predictive epigenomic and transcription factor binding annotations. Nat Commun. 2020 12 02; 11(1):6168. Grujic O, Phung TN, Kwon SB, Arneson A, Lee Y, Lohmueller KE, Ernst J. PMID: 33268804; PMCID: PMC7710766.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    27. Greater strength of selection and higher proportion of beneficial amino acid changing mutations in humans compared with mice and Drosophila melanogaster. Genome Res. 2021 01; 31(1):110-120. Zhen Y, Huber CD, Davies RW, Lohmueller KE. PMID: 33208456; PMCID: PMC7849390.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimals
    28. A community-maintained standard library of population genetic models. Elife. 2020 06 23; 9. Adrion JR, Cole CB, Dukler N, Galloway JG, Gladstein AL, Gower G, Kyriazis CC, Ragsdale AP, Tsambos G, Baumdicker F, Carlson J, Cartwright RA, Durvasula A, Gronau I, Kim BY, McKenzie P, Messer PW, Noskova E, Ortega-Del Vecchyo D, Racimo F, Struck TJ, Gravel S, Gutenkunst RN, Lohmueller KE, Ralph PL, Schrider DR, Siepel A, Kelleher J, Kern AD. PMID: 32573438; PMCID: PMC7438115.
      View in: PubMed   Mentions: 61     Fields:    Translation:HumansAnimalsCells
    29. The Impact of Recessive Deleterious Variation on Signals of Adaptive Introgression in Human Populations. Genetics. 2020 07; 215(3):799-812. Zhang X, Kim B, Lohmueller KE, Huerta-Sánchez E. PMID: 32487519; PMCID: PMC7337073.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    30. Population genetic models of GERP scores suggest pervasive turnover of constrained sites across mammalian evolution. PLoS Genet. 2020 05; 16(5):e1008827. Huber CD, Kim BY, Lohmueller KE. PMID: 32469868; PMCID: PMC7286533.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansAnimalsCells
    31. Aquatic Adaptation and Depleted Diversity: A Deep Dive into the Genomes of the Sea Otter and Giant Otter. Mol Biol Evol. 2019 12 01; 36(12):2631-2655. Beichman AC, Koepfli KP, Li G, Murphy W, Dobrynin P, Kliver S, Tinker MT, Murray MJ, Johnson J, Lindblad-Toh K, Karlsson EK, Lohmueller KE, Wayne RK. PMID: 31212313; PMCID: PMC7967881.
      View in: PubMed   Mentions: 24     Fields:    Translation:Animals
    32. Testing whether stutter and low-level DNA peaks are additive. Forensic Sci Int Genet. 2019 11; 43:102166. Buckleton JS, Lohmueller KE, Inman K, Cheng K, Curran JM, Pugh SN, Bright JA, Taylor DA. PMID: 31586815.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    33. Ten simple rules for giving an effective academic job talk. PLoS Comput Biol. 2019 07; 15(7):e1007163. Sura SA, Smith LL, Ambrose MR, Amorim CEG, Beichman AC, Gomez ACR, Juhn M, Kandlikar GS, Miller JS, Mooney J, Mummah RO, Lohmueller KE, Lloyd-Smith JO. PMID: 31344032; PMCID: PMC6657819.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    34. Complex patterns of sex-biased demography in canines. Proc Biol Sci. 2019 05 29; 286(1903):20181976. Phung TN, Wayne RK, Wilson MA, Lohmueller KE. PMID: 31113325; PMCID: PMC6545087.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
    35. Genomic signatures of extensive inbreeding in Isle Royale wolves, a population on the threshold of extinction. Sci Adv. 2019 05; 5(5):eaau0757. Robinson JA, Räikkönen J, Vucetich LM, Vucetich JA, Peterson RO, Lohmueller KE, Wayne RK. PMID: 31149628; PMCID: PMC6541468.
      View in: PubMed   Mentions: 75     Fields:    Translation:Animals
    36. Growth factor gene IGF1 is associated with bill size in the black-bellied seedcracker Pyrenestes ostrinus. Nat Commun. 2018 11 19; 9(1):4855. vonHoldt BM, Kartzinel RY, Huber CD, Le Underwood V, Zhen Y, Ruegg K, Lohmueller KE, Smith TB. PMID: 30451848; PMCID: PMC6242981.
      View in: PubMed   Mentions: 6     Fields:    Translation:Animals
    37. Purging of Strongly Deleterious Mutations Explains Long-Term Persistence and Absence of Inbreeding Depression in Island Foxes. Curr Biol. 2018 11 05; 28(21):3487-3494.e4. Robinson JA, Brown C, Kim BY, Lohmueller KE, Wayne RK. PMID: 30415705; PMCID: PMC6462144.
      View in: PubMed   Mentions: 60     Fields:    Translation:Animals
    38. Understanding the Hidden Complexity of Latin American Population Isolates. Am J Hum Genet. 2018 11 01; 103(5):707-726. Mooney JA, Huber CD, Service S, Sul JH, Marsden CD, Zhang Z, Sabatti C, Ruiz-Linares A, Bedoya G, Costa Rica/Colombia Consortium for Genetic Investigation of Bipolar Endophenotypes, Freimer N, Lohmueller KE. PMID: 30401458; PMCID: PMC6218714.
      View in: PubMed   Mentions: 27     Fields:    Translation:Humans
    39. Deleterious variation shapes the genomic landscape of introgression. PLoS Genet. 2018 10; 14(10):e1007741. Kim BY, Huber CD, Lohmueller KE. PMID: 30346959; PMCID: PMC6233928.
      View in: PubMed   Mentions: 46     Fields:    Translation:Humans
    40. RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercus sect. Quercus: Fagaceae). Mol Ecol. 2018 11; 27(22):4556-4571. Kim BY, Wei X, Fitz-Gibbon S, Lohmueller KE, Ortego J, Gugger PF, Sork VL. PMID: 30226013.
      View in: PubMed   Mentions: 6     Fields:    Translation:Animals
    41. Genomic history of the Sardinian population. Nat Genet. 2018 10; 50(10):1426-1434. Chiang CWK, Marcus JH, Sidore C, Biddanda A, Al-Asadi H, Zoledziewska M, Pitzalis M, Busonero F, Maschio A, Pistis G, Steri M, Angius A, Lohmueller KE, Abecasis GR, Schlessinger D, Cucca F, Novembre J. PMID: 30224645; PMCID: PMC6168346.
      View in: PubMed   Mentions: 32     Fields:    Translation:Humans
    42. Gene expression drives the evolution of dominance. Nat Commun. 2018 07 16; 9(1):2750. Huber CD, Durvasula A, Hancock AM, Lohmueller KE. PMID: 30013096; PMCID: PMC6048131.
      View in: PubMed   Mentions: 48     Fields:    Translation:Animals
    43. Natural Selection and Origin of a Melanistic Allele in North American Gray Wolves. Mol Biol Evol. 2018 05 01; 35(5):1190-1209. Schweizer RM, Durvasula A, Smith J, Vohr SH, Stahler DR, Galaverni M, Thalmann O, Smith DW, Randi E, Ostrander EA, Green RE, Lohmueller KE, Novembre J, Wayne RK. PMID: 29688543; PMCID: PMC6455901.
      View in: PubMed   Mentions: 14     Fields:    Translation:Animals
    44. Comparison of Single Genome and Allele Frequency Data Reveals Discordant Demographic Histories. G3 (Bethesda). 2017 11 06; 7(11):3605-3620. Beichman AC, Phung TN, Lohmueller KE. PMID: 28893846; PMCID: PMC5677151.
      View in: PubMed   Mentions: 29     Fields:    Translation:Humans
    45. Genomic divergence across ecological gradients in the Central African rainforest songbird (Andropadus virens). Mol Ecol. 2017 Oct; 26(19):4966-4977. Zhen Y, Harrigan RJ, Ruegg KC, Anderson EC, Ng TC, Lao S, Lohmueller KE, Smith TB. PMID: 28752944.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    46. Determining the factors driving selective effects of new nonsynonymous mutations. Proc Natl Acad Sci U S A. 2017 04 25; 114(17):4465-4470. Huber CD, Kim BY, Marsden CD, Lohmueller KE. PMID: 28400513; PMCID: PMC5410820.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansAnimals
    47. Inference of the Distribution of Selection Coefficients for New Nonsynonymous Mutations Using Large Samples. Genetics. 2017 05; 206(1):345-361. Kim BY, Huber CD, Lohmueller KE. PMID: 28249985; PMCID: PMC5419480.
      View in: PubMed   Mentions: 91     Fields:    Translation:Humans
    48. The Effect of an Extreme and Prolonged Population Bottleneck on Patterns of Deleterious Variation: Insights from the Greenlandic Inuit. Genetics. 2017 02; 205(2):787-801. Pedersen CT, Lohmueller KE, Grarup N, Bjerregaard P, Hansen T, Siegismund HR, Moltke I, Albrechtsen A. PMID: 27903613; PMCID: PMC5289852.
      View in: PubMed   Mentions: 27     Fields:    Translation:Humans
    49. Determining the Effect of Natural Selection on Linked Neutral Divergence across Species. PLoS Genet. 2016 08; 12(8):e1006199. Phung TN, Huber CD, Lohmueller KE. PMID: 27508305; PMCID: PMC4980041.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansAnimalsCells
    50. PReFerSim: fast simulation of demography and selection under the Poisson Random Field model. Bioinformatics. 2016 11 15; 32(22):3516-3518. Ortega-Del Vecchyo D, Marsden CD, Lohmueller KE. PMID: 27436562; PMCID: PMC5181561.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    51. Genomic Flatlining in the Endangered Island Fox. Curr Biol. 2016 05 09; 26(9):1183-9. Robinson JA, Ortega-Del Vecchyo D, Fan Z, Kim BY, vonHoldt BM, Marsden CD, Lohmueller KE, Wayne RK. PMID: 27112291.
      View in: PubMed   Mentions: 81     Fields:    Translation:Animals
    52. An assessment of the information content of likelihood ratios derived from complex mixtures. Forensic Sci Int Genet. 2016 May; 22:64-72. Marsden CD, Rudin N, Inman K, Lohmueller KE. PMID: 26851613.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    53. Validation of probabilistic genotyping software for use in forensic DNA casework: Definitions and illustrations. Sci Justice. 2016 Mar; 56(2):104-8. Haned H, Gill P, Lohmueller K, Inman K, Rudin N. PMID: 26976468.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    54. Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs. Proc Natl Acad Sci U S A. 2016 01 05; 113(1):152-7. Marsden CD, Ortega-Del Vecchyo D, O'Brien DP, Taylor JF, Ramirez O, Vilà C, Marques-Bonet T, Schnabel RD, Wayne RK, Lohmueller KE. PMID: 26699508; PMCID: PMC4711855.
      View in: PubMed   Mentions: 134     Fields:    Translation:Animals
    55. Lab Retriever: a software tool for calculating likelihood ratios incorporating a probability of drop-out for forensic DNA profiles. BMC Bioinformatics. 2015 Sep 18; 16:298. Inman K, Rudin N, Cheng K, Robinson C, Kirschner A, Inman-Semerau L, Lohmueller KE. PMID: 26384762; PMCID: PMC4575494.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    56. Height-reducing variants and selection for short stature in Sardinia. Nat Genet. 2015 Nov; 47(11):1352-1356. Zoledziewska M, Sidore C, Chiang CWK, Sanna S, Mulas A, Steri M, Busonero F, Marcus JH, Marongiu M, Maschio A, Ortega Del Vecchyo D, Floris M, Meloni A, Delitala A, Concas MP, Murgia F, Biino G, Vaccargiu S, Nagaraja R, Lohmueller KE, UK10K consortium, Timpson NJ, Soranzo N, Tachmazidou I, Dedoussis G, Zeggini E, Understanding Society Scientific Group, Uzzau S, Jones C, Lyons R, Angius A, Abecasis GR, Novembre J, Schlessinger D, Cucca F. PMID: 26366551; PMCID: PMC4627578.
      View in: PubMed   Mentions: 51     Fields:    Translation:Humans
    57. Fitting the Balding-Nichols model to forensic databases. Forensic Sci Int Genet. 2015 Nov; 19:86-91. Rohlfs RV, Aguiar VRC, Lohmueller KE, Castro AM, Ferreira ACS, Almeida VCO, Louro ID, Nielsen R. PMID: 26186694.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    58. Leveraging ancestry to improve causal variant identification in exome sequencing for monogenic disorders. Eur J Hum Genet. 2016 Jan; 24(1):113-9. Brown R, Lee H, Eskin A, Kichaev G, Lohmueller KE, Reversade B, Nelson SF, Pasaniuc B. PMID: 25898925; PMCID: PMC4795218.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    59. Selection and reduced population size cannot explain higher amounts of Neandertal ancestry in East Asian than in European human populations. Am J Hum Genet. 2015 Mar 05; 96(3):454-61. Kim BY, Lohmueller KE. PMID: 25683122; PMCID: PMC4375557.
      View in: PubMed   Mentions: 42     Fields:    Translation:HumansAnimals
    60. The distribution of deleterious genetic variation in human populations. Curr Opin Genet Dev. 2014 Dec; 29:139-46. Lohmueller KE. PMID: 25461617.
      View in: PubMed   Mentions: 69     Fields:    Translation:Humans
    61. Evolution. On the origin of Peter Rabbit. Science. 2014 Aug 29; 345(6200):1000-1. Lohmueller KE. PMID: 25170135.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    62. A model-based approach for identifying signatures of ancient balancing selection in genetic data. PLoS Genet. 2014 Aug; 10(8):e1004561. DeGiorgio M, Lohmueller KE, Nielsen R. PMID: 25144706; PMCID: PMC4140648.
      View in: PubMed   Mentions: 84     Fields:    Translation:Humans
    63. Amerindian-specific regions under positive selection harbour new lipid variants in Latinos. Nat Commun. 2014 Jun 02; 5:3983. Ko A, Cantor RM, Weissglas-Volkov D, Nikkola E, Reddy PM, Sinsheimer JS, Pasaniuc B, Brown R, Alvarez M, Rodriguez A, Rodriguez-Guillen R, Bautista IC, Arellano-Campos O, Muñoz-Hernández LL, Salomaa V, Kaprio J, Jula A, Jauhiainen M, Heliövaara M, Raitakari O, Lehtimäki T, Eriksson JG, Perola M, Lohmueller KE, Matikainen N, Taskinen MR, Rodriguez-Torres M, Riba L, Tusie-Luna T, Aguilar-Salinas CA, Pajukanta P. PMID: 24886709; PMCID: PMC4062071.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    64. The impact of population demography and selection on the genetic architecture of complex traits. PLoS Genet. 2014; 10(5):e1004379. Lohmueller KE. PMID: 24875776; PMCID: PMC4038606.
      View in: PubMed   Mentions: 67     Fields:    Translation:Humans
    65. Analysis of allelic drop-out using the Identifiler(®) and PowerPlex(®) 16 forensic STR typing systems. Forensic Sci Int Genet. 2014 Sep; 12:1-11. Lohmueller KE, Rudin N, Inman K. PMID: 24841801.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    66. Natural selection reduced diversity on human y chromosomes. PLoS Genet. 2014 Jan; 10(1):e1004064. Wilson Sayres MA, Lohmueller KE, Nielsen R. PMID: 24415951; PMCID: PMC3886894.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansCells
    67. Whole-exome sequencing of 2,000 Danish individuals and the role of rare coding variants in type 2 diabetes. Am J Hum Genet. 2013 Dec 05; 93(6):1072-86. Lohmueller KE, Sparsø T, Li Q, Andersson E, Korneliussen T, Albrechtsen A, Banasik K, Grarup N, Hallgrimsdottir I, Kiil K, Kilpeläinen TO, Krarup NT, Pers TH, Sanchez G, Hu Y, Degiorgio M, Jørgensen T, Sandbæk A, Lauritzen T, Brunak S, Kristiansen K, Li Y, Hansen T, Wang J, Nielsen R, Pedersen O. PMID: 24290377; PMCID: PMC3852935.
      View in: PubMed   Mentions: 74     Fields:    Translation:Humans
    68. Calculating the weight of evidence in low-template forensic DNA casework. J Forensic Sci. 2013 Jan; 58 Suppl 1:S243-9. Lohmueller KE, Rudin N. PMID: 23082963; PMCID: PMC6449098.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    69. Natural selection affects multiple aspects of genetic variation at putatively neutral sites across the human genome. PLoS Genet. 2011 Oct; 7(10):e1002326. Lohmueller KE, Albrechtsen A, Li Y, Kim SY, Korneliussen T, Vinckenbosch N, Tian G, Huerta-Sanchez E, Feder AF, Grarup N, Jørgensen T, Jiang T, Witte DR, Sandbæk A, Hellmann I, Lauritzen T, Hansen T, Pedersen O, Wang J, Nielsen R. PMID: 22022285; PMCID: PMC3192825.
      View in: PubMed   Mentions: 84     Fields:    Translation:HumansAnimals
    70. An Aboriginal Australian genome reveals separate human dispersals into Asia. Science. 2011 Oct 07; 334(6052):94-8. Rasmussen M, Guo X, Wang Y, Lohmueller KE, Rasmussen S, Albrechtsen A, Skotte L, Lindgreen S, Metspalu M, Jombart T, Kivisild T, Zhai W, Eriksson A, Manica A, Orlando L, De La Vega FM, Tridico S, Metspalu E, Nielsen K, Ávila-Arcos MC, Moreno-Mayar JV, Muller C, Dortch J, Gilbert MT, Lund O, Wesolowska A, Karmin M, Weinert LA, Wang B, Li J, Tai S, Xiao F, Hanihara T, van Driem G, Jha AR, Ricaut FX, de Knijff P, Migliano AB, Gallego Romero I, Kristiansen K, Lambert DM, Brunak S, Forster P, Brinkmann B, Nehlich O, Bunce M, Richards M, Gupta R, Bustamante CD, Krogh A, Foley RA, Lahr MM, Balloux F, Sicheritz-Pontén T, Villems R, Nielsen R, Wang J, Willerslev E. PMID: 21940856; PMCID: PMC3991479.
      View in: PubMed   Mentions: 229     Fields:    Translation:HumansAnimals
    71. Estimation of allele frequency and association mapping using next-generation sequencing data. BMC Bioinformatics. 2011 Jun 11; 12:231. Kim SY, Lohmueller KE, Albrechtsen A, Li Y, Korneliussen T, Tian G, Grarup N, Jiang T, Andersen G, Witte D, Jorgensen T, Hansen T, Pedersen O, Wang J, Nielsen R. PMID: 21663684; PMCID: PMC3212839.
      View in: PubMed   Mentions: 89     Fields:    Translation:Humans
    72. Detecting directional selection in the presence of recent admixture in African-Americans. Genetics. 2011 Mar; 187(3):823-35. Lohmueller KE, Bustamante CD, Clark AG. PMID: 21196524; PMCID: PMC3063676.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    73. A simple genetic architecture underlies morphological variation in dogs. PLoS Biol. 2010 Aug 10; 8(8):e1000451. Boyko AR, Quignon P, Li L, Schoenebeck JJ, Degenhardt JD, Lohmueller KE, Zhao K, Brisbin A, Parker HG, vonHoldt BM, Cargill M, Auton A, Reynolds A, Elkahloun AG, Castelhano M, Mosher DS, Sutter NB, Johnson GS, Novembre J, Hubisz MJ, Siepel A, Wayne RK, Bustamante CD, Ostrander EA. PMID: 20711490; PMCID: PMC2919785.
      View in: PubMed   Mentions: 240     Fields:    Translation:Animals
    74. Sex-averaged recombination and mutation rates on the X chromosome: a comment on Labuda et al. Am J Hum Genet. 2010 Jun 11; 86(6):978-80; author reply 980-1. Lohmueller KE, Degenhardt JD, Keinan A. PMID: 20541048; PMCID: PMC3032063.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    75. The effect of recent admixture on inference of ancient human population history. Genetics. 2010 Jun; 185(2):611-22. Lohmueller KE, Bustamante CD, Clark AG. PMID: 20382834; PMCID: PMC2881141.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    76. Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication. Nature. 2010 Apr 08; 464(7290):898-902. Vonholdt BM, Pollinger JP, Lohmueller KE, Han E, Parker HG, Quignon P, Degenhardt JD, Boyko AR, Earl DA, Auton A, Reynolds A, Bryc K, Brisbin A, Knowles JC, Mosher DS, Spady TC, Elkahloun A, Geffen E, Pilot M, Jedrzejewski W, Greco C, Randi E, Bannasch D, Wilton A, Shearman J, Musiani M, Cargill M, Jones PG, Qian Z, Huang W, Ding ZL, Zhang YP, Bustamante CD, Ostrander EA, Novembre J, Wayne RK. PMID: 20237475; PMCID: PMC3494089.
      View in: PubMed   Mentions: 290     Fields:    Translation:Animals
    77. Graydon et al. provide no new evidence that forensic STR loci are functional. Forensic Sci Int Genet. 2010 Jul; 4(4):273-4. Lohmueller KE. PMID: 20457048.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    78. Detecting ancient admixture and estimating demographic parameters in multiple human populations. Mol Biol Evol. 2009 Aug; 26(8):1823-7. Wall JD, Lohmueller KE, Plagnol V. PMID: 19420049; PMCID: PMC2734152.
      View in: PubMed   Mentions: 56     Fields:    Translation:HumansAnimals
    79. Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data. Genetics. 2009 May; 182(1):217-31. Lohmueller KE, Bustamante CD, Clark AG. PMID: 19255370; PMCID: PMC2674818.
      View in: PubMed   Mentions: 32     Fields:    Translation:Humans
    80. Global distribution of genomic diversity underscores rich complex history of continental human populations. Genome Res. 2009 May; 19(5):795-803. Auton A, Bryc K, Boyko AR, Lohmueller KE, Novembre J, Reynolds A, Indap A, Wright MH, Degenhardt JD, Gutenkunst RN, King KS, Nelson MR, Bustamante CD. PMID: 19218534; PMCID: PMC2675968.
      View in: PubMed   Mentions: 96     Fields:    Translation:Humans
    81. Assessing the evolutionary impact of amino acid mutations in the human genome. PLoS Genet. 2008 May 30; 4(5):e1000083. Boyko AR, Williamson SH, Indap AR, Degenhardt JD, Hernandez RD, Lohmueller KE, Adams MD, Schmidt S, Sninsky JJ, Sunyaev SR, White TJ, Nielsen R, Clark AG, Bustamante CD. PMID: 18516229; PMCID: PMC2377339.
      View in: PubMed   Mentions: 362     Fields:    Translation:HumansAnimals
    82. Proportionally more deleterious genetic variation in European than in African populations. Nature. 2008 Feb 21; 451(7181):994-7. Lohmueller KE, Indap AR, Schmidt S, Boyko AR, Hernandez RD, Hubisz MJ, Sninsky JJ, White TJ, Sunyaev SR, Nielsen R, Clark AG, Bustamante CD. PMID: 18288194; PMCID: PMC2923434.
      View in: PubMed   Mentions: 209     Fields:    Translation:Humans
    83. Analysis of genetic variation in Ashkenazi Jews by high density SNP genotyping. BMC Genet. 2008 Feb 05; 9:14. Olshen AB, Gold B, Lohmueller KE, Struewing JP, Satagopan J, Stefanov SA, Eskin E, Kirchhoff T, Lautenberger JA, Klein RJ, Friedman E, Norton L, Ellis NA, Viale A, Lee CS, Borgen PI, Clark AG, Offit K, Boyd J. PMID: 18251999; PMCID: PMC2259380.
      View in: PubMed   Mentions: 25     Fields:    Translation:Humans
    84. Patterns of genetic variation in the hypertension candidate gene GRK4: ethnic variation and haplotype structure. Ann Hum Genet. 2006 Jan; 70(Pt 1):27-41. Lohmueller KE, Wong LJ, Mauney MM, Jiang L, Felder RA, Jose PA, Williams SM. PMID: 16441255.
      View in: PubMed   Mentions: 29     Fields:    Translation:Humans
    85. Variants associated with common disease are not unusually differentiated in frequency across populations. Am J Hum Genet. 2006 Jan; 78(1):130-6. Lohmueller KE, Mauney MM, Reich D, Braverman JM. PMID: 16385456; PMCID: PMC1380210.
      View in: PubMed   Mentions: 28     Fields:    Translation:Humans
    86. Methods for high-density admixture mapping of disease genes. Am J Hum Genet. 2004 May; 74(5):979-1000. Patterson N, Hattangadi N, Lane B, Lohmueller KE, Hafler DA, Oksenberg JR, Hauser SL, Smith MW, O'Brien SJ, Altshuler D, Daly MJ, Reich D. PMID: 15088269; PMCID: PMC1181990.
      View in: PubMed   Mentions: 282     Fields:    Translation:HumansCells
    87. Meta-analysis of genetic association studies supports a contribution of common variants to susceptibility to common disease. Nat Genet. 2003 Feb; 33(2):177-82. Lohmueller KE, Pearce CL, Pike M, Lander ES, Hirschhorn JN. PMID: 12524541.
      View in: PubMed   Mentions: 565     Fields:    Translation:Humans
    88. A comprehensive review of genetic association studies. Genet Med. 2002 Mar-Apr; 4(2):45-61. Hirschhorn JN, Lohmueller K, Byrne E, Hirschhorn K. PMID: 11882781.
      View in: PubMed   Mentions: 553     Fields:    Translation:Humans
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