Nandita Garud

Title(s)Assistant Professor, Ecology And Evolutionary Biology
SchoolCollege of Letters and Science
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    Title(s)Assistant Professor, Human Genetics

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. SNV-FEAST: microbial source tracking with single nucleotide variants. Genome Biol. 2023 Apr 30; 24(1):101. Briscoe L, Halperin E, Garud NR. PMID: 37121994.
      View in: PubMed   Mentions:    Fields:    
    2. Ecological Stability Emerges at the Level of Strains in the Human Gut Microbiome. mBio. 2023 Apr 25; 14(2):e0250222. Wolff R, Shoemaker W, Garud N. PMID: 36809109; PMCID: PMC10127601.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    3. Understanding soft sweeps: a signature of rapid adaptation. Nat Rev Genet. 2023 Feb 17. Garud NR. PMID: 36801929; PMCID: PMC9936460.
      View in: PubMed   Mentions:    Fields:    
    4. Enrichment of Hard Sweeps on the X Chromosome in Drosophila melanogaster. Mol Biol Evol. 2023 01 04; 40(1). Harris M, Garud NR. PMID: 36546413; PMCID: PMC9825254.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    5. Rapid evolution and strain turnover in the infant gut microbiome. Genome Res. 2022 06; 32(6):1124-1136. Chen DW, Garud NR. PMID: 35545448; PMCID: PMC9248880.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    6. Microbial Evolution: An overlooked biomarker of host diet. Cell Host Microbe. 2022 02 09; 30(2):146-147. Garud N. PMID: 35143765.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    7. Comparative Population Genetics in the Human Gut Microbiome. Genome Biol Evol. 2022 01 04; 14(1). Shoemaker WR, Chen D, Garud NR. PMID: 34028530; PMCID: PMC8743038.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    8. The Tempo and Mode of Adaptation in a Complex Natural Population: the Microbiome. mSystems. 2021 Aug 31; 6(4):e0077921. Garud N. PMID: 34427524; PMCID: PMC8407300.
      View in: PubMed   Mentions:    Fields:    
    9. Longitudinal linked-read sequencing reveals ecological and evolutionary responses of a human gut microbiome during antibiotic treatment. Genome Res. 2021 08; 31(8):1433-1446. Roodgar M, Good BH, Garud NR, Martis S, Avula M, Zhou W, Lancaster SM, Lee H, Babveyh A, Nesamoney S, Pollard KS, Snyder MP. PMID: 34301627; PMCID: PMC8327913.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    10. Detection of hard and soft selective sweeps from Drosophila melanogaster population genomic data. PLoS Genet. 2021 02; 17(2):e1009373. Garud NR, Messer PW, Petrov DA. PMID: 33635910; PMCID: PMC7946363.
      View in: PubMed   Mentions: 15     Fields:    Translation:Animals
    11. Population Genetics in the Human Microbiome. Trends Genet. 2020 01; 36(1):53-67. Garud NR, Pollard KS. PMID: 31780057.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansCells
    12. Evolutionary dynamics of bacteria in the gut microbiome within and across hosts. PLoS Biol. 2019 01; 17(1):e3000102. Garud NR, Good BH, Hallatschek O, Pollard KS. PMID: 30673701; PMCID: PMC6361464.
      View in: PubMed   Mentions: 116     Fields:    Translation:HumansCells
    13. Detection and Classification of Hard and Soft Sweeps from Unphased Genotypes by Multilocus Genotype Identity. Genetics. 2018 12; 210(4):1429-1452. Harris AM, Garud NR, DeGiorgio M. PMID: 30315068; PMCID: PMC6283157.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
    14. An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography. Genome Res. 2016 11; 26(11):1612-1625. Nayfach S, Rodriguez-Mueller B, Garud N, Pollard KS. PMID: 27803195; PMCID: PMC5088602.
      View in: PubMed   Mentions: 206     Fields:    Translation:HumansCellsPHPublic Health
    15. Elevated Linkage Disequilibrium and Signatures of Soft Sweeps Are Common in Drosophila melanogaster. Genetics. 2016 06; 203(2):863-80. Garud NR, Petrov DA. PMID: 27098909; PMCID: PMC4896199.
      View in: PubMed   Mentions: 18     Fields:    Translation:Animals
    16. Enhancing the mathematical properties of new haplotype homozygosity statistics for the detection of selective sweeps. Theor Popul Biol. 2015 Jun; 102:94-101. Garud NR, Rosenberg NA. PMID: 25891325; PMCID: PMC4447712.
      View in: PubMed   Mentions: 12     Fields:    Translation:Animals
    17. Recent selective sweeps in North American Drosophila melanogaster show signatures of soft sweeps. PLoS Genet. 2015 Feb; 11(2):e1005004. Garud NR, Messer PW, Buzbas EO, Petrov DA. PMID: 25706129; PMCID: PMC4338236.
      View in: PubMed   Mentions: 180     Fields:    Translation:Animals
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