Roy Wollman

Title(s)Professor, Integrative Biology And Physiology
SchoolCollege of Letters and Science
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    Title(s)Professor, Chemistry and Biochemistry

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    Spatial transcriptomics mapping of basal ganglia to understand critical periods for sensorimotor learning
    NIH R21NS123763Sep 1, 2021 - Feb 28, 2023
    Role: Co-Principal Investigator
    Spatiotemporal Molecular Substrates of TBI at Single Cell Resolution
    NIH R01NS117148Jul 1, 2020 - Mar 31, 2025
    Role: Co-Principal Investigator
    Imaging the healing of ocular injury caused by vesicants to identify new therapies
    NIH R21EY031283May 1, 2020 - Apr 30, 2022
    Role: Principal Investigator
    Identify mechanisms of dedifferentiation during limbal stem cell niche reconstruction.
    NIH R21EY030250Apr 1, 2019 - Mar 31, 2021
    Role: Principal Investigator
    Understanding dynamical coding by NFkB
    NIH R01GM117134Feb 15, 2016 - Jan 31, 2021
    Role: Co-Principal Investigator
    The Spread of Noisy Information in Corneal Epithelial Wound Response Signaling
    NIH R01EY024960Aug 1, 2015 - Jun 30, 2020
    Role: Principal Investigator
    Reliable Signal Transduction
    NIH R01GM111404May 1, 2015 - Mar 31, 2019
    Role: Principal Investigator
    Pathogen detection signaling network analysis of selectivity and sensitivity
    NIH F32AI081448Apr 1, 2009 - Dec 31, 2009
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Dynamical and combinatorial coding by MAPK p38 and NFκB in the inflammatory response of macrophages. Mol Syst Biol. 2024 Jun 13. Luecke S, Guo X, Sheu KM, Singh A, Lowe SC, Han M, Diaz J, Lopes F, Wollman R, Hoffmann A. PMID: 38872050.
      View in: PubMed   Mentions:    Fields:    
    2. Single-cell Ca2+ parameter inference reveals how transcriptional states inform dynamic cell responses. J R Soc Interface. 2023 06; 20(203):20230172. Wu X, Wollman R, MacLean AL. PMID: 37282589; PMCID: PMC10244972.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    3. Myoscaffolds reveal laminin scarring is detrimental for stem cell function while sarcospan induces compensatory fibrosis. NPJ Regen Med. 2023 Mar 15; 8(1):16. Stearns-Reider KM, Hicks MR, Hammond KG, Reynolds JC, Maity A, Kurmangaliyev YZ, Chin J, Stieg AZ, Geisse NA, Hohlbauch S, Kaemmer S, Schmitt LR, Pham TT, Yamauchi K, Novitch BG, Wollman R, Hansen KC, Pyle AD, Crosbie RH. PMID: 36922514; PMCID: PMC10017766.
      View in: PubMed   Mentions: 5  
    4. Quantifying the phenotypic information in mRNA abundance. Mol Syst Biol. 2022 08; 18(8):e11001. Maltz E, Wollman R. PMID: 35965452; PMCID: PMC9376724.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    5. Epigenetic fluctuations underlie gene expression timescales and variability. Physiol Genomics. 2022 06 01; 54(6):220-229. Lannan R, Maity A, Wollman R. PMID: 35476585.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    6. scPNMF: sparse gene encoding of single cells to facilitate gene selection for targeted gene profiling. Bioinformatics. 2021 07 12; 37(Suppl_1):i358-i366. Song D, Li K, Hemminger Z, Wollman R, Li JJ. PMID: 34252925; PMCID: PMC8275345.
      View in: PubMed   Mentions: 4     Fields:    
    7. Joint cell segmentation and cell type annotation for spatial transcriptomics. Mol Syst Biol. 2021 06; 17(6):e10108. Littman R, Hemminger Z, Foreman R, Arneson D, Zhang G, Gómez-Pinilla F, Yang X, Wollman R. PMID: 34057817; PMCID: PMC8166214.
      View in: PubMed   Mentions: 27     Fields:    Translation:AnimalsCells
    8. TNF controls a speed-accuracy tradeoff in the cell death decision to restrict viral spread. Nat Commun. 2021 05 20; 12(1):2992. Oyler-Yaniv J, Oyler-Yaniv A, Maltz E, Wollman R. PMID: 34016976; PMCID: PMC8137918.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    9. Bridging scales: From cell biology to physiology using in situ single-cell technologies. Cell Syst. 2021 05 19; 12(5):388-400. Nagle MP, Tam GS, Maltz E, Hemminger Z, Wollman R. PMID: 34015260.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    10. Quantifying information accumulation encoded in the dynamics of biochemical signaling. Nat Commun. 2021 02 24; 12(1):1272. Tang Y, Adelaja A, Ye FX, Deeds E, Wollman R, Hoffmann A. PMID: 33627672; PMCID: PMC7904837.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    11. An incoherent feedforward loop interprets NFκB/RelA dynamics to determine TNF-induced necroptosis decisions. Mol Syst Biol. 2020 12; 16(12):e9677. Oliver Metzig M, Tang Y, Mitchell S, Taylor B, Foreman R, Wollman R, Hoffmann A. PMID: 33314666; PMCID: PMC7734648.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    12. Identifying chromatin features that regulate gene expression distribution. Sci Rep. 2020 11 25; 10(1):20566. Zhang T, Foreman R, Wollman R. PMID: 33239733; PMCID: PMC7688950.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    13. Information transmission from NFkB signaling dynamics to gene expression. PLoS Comput Biol. 2020 08; 16(8):e1008011. Maity A, Wollman R. PMID: 32797040; PMCID: PMC7478807.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    14. Loci specific epigenetic drug sensitivity. Nucleic Acids Res. 2020 05 21; 48(9):4797-4810. Zhang T, Pilko A, Wollman R. PMID: 32246716; PMCID: PMC7229858.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    15. GATA3 Mediates a Fast, Irreversible Commitment to BMP4-Driven Differentiation in Human Embryonic Stem Cells. Cell Stem Cell. 2020 05 07; 26(5):693-706.e9. Gunne-Braden A, Sullivan A, Gharibi B, Sheriff RSM, Maity A, Wang YF, Edwards A, Jiang M, Howell M, Goldstone R, Wollman R, East P, Santos SDM. PMID: 32302522; PMCID: PMC7487786.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    16. Mammalian gene expression variability is explained by underlying cell state. Mol Syst Biol. 2020 02; 16(2):e9146. Foreman R, Wollman R. PMID: 32043799; PMCID: PMC7011657.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    17. Single-Molecule Threshold of HIV Fate Decision. Biophys J. 2017 06 06; 112(11):2247-2248. Wollman R. PMID: 28591597; PMCID: PMC5474877.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    18. Wound-induced Ca2+ wave propagates through a simple release and diffusion mechanism. Mol Biol Cell. 2017 Jun 01; 28(11):1457-1466. Handly LN, Wollman R. PMID: 28404746; PMCID: PMC5449146.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    19. Pierced Lasso Topology Controls Function in Leptin. J Phys Chem B. 2017 02 02; 121(4):706-718. Haglund E, Pilko A, Wollman R, Jennings PA, Onuchic JN. PMID: 28035835.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    20. Distinct cellular states determine calcium signaling response. Mol Syst Biol. 2016 Dec 15; 12(12):894. Yao J, Pilko A, Wollman R. PMID: 27979909; PMCID: PMC5199124.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    21. Signal Transduction at the Single-Cell Level: Approaches to Study the Dynamic Nature of Signaling Networks. J Mol Biol. 2016 09 25; 428(19):3669-82. Handly LN, Yao J, Wollman R. PMID: 27430597; PMCID: PMC5023475.
      View in: PubMed   Mentions: 13     Fields:    Translation:Cells
    22. Paracrine communication maximizes cellular response fidelity in wound signaling. Elife. 2015 Oct 08; 4:e09652. Handly LN, Pilko A, Wollman R. PMID: 26448485; PMCID: PMC4686426.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansCells
    23. Limited specificity of IRF3 and ISGF3 in the transcriptional innate-immune response to double-stranded RNA. J Leukoc Biol. 2015 Jul; 98(1):119-28. Ourthiague DR, Birnbaum H, Ortenlöf N, Vargas JD, Wollman R, Hoffmann A. PMID: 25896227; PMCID: PMC4467169.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    24. Systems biology. Accurate information transmission through dynamic biochemical signaling networks. Science. 2014 Dec 12; 346(6215):1370-3. Selimkhanov J, Taylor B, Yao J, Pilko A, Albeck J, Hoffmann A, Tsimring L, Wollman R. PMID: 25504722; PMCID: PMC4813785.
      View in: PubMed   Mentions: 164     Fields:    Translation:HumansCells
    25. Development. Counting the ways to decode dynamic signals. Science. 2014 Mar 21; 343(6177):1326-7. Wollman R. PMID: 24653029.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    26. Prometaphase spindle maintenance by an antagonistic motor-dependent force balance made robust by a disassembling lamin-B envelope. J Cell Biol. 2010 Jan 11; 188(1):49-68. Civelekoglu-Scholey G, Tao L, Brust-Mascher I, Wollman R, Scholey JM. PMID: 20065089; PMCID: PMC2812851.
      View in: PubMed   Mentions: 38     Fields:    Translation:AnimalsCells
    27. Reverse engineering of force integration during mitosis in the Drosophila embryo. Mol Syst Biol. 2008; 4:195. Wollman R, Civelekoglu-Scholey G, Scholey JM, Mogilner A. PMID: 18463619; PMCID: PMC2424291.
      View in: PubMed   Mentions: 32     Fields:    Translation:AnimalsCells
    28. High throughput microscopy: from raw images to discoveries. J Cell Sci. 2007 Nov 01; 120(Pt 21):3715-22. Wollman R, Stuurman N. PMID: 17959627.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansCells
    29. Genes required for mitotic spindle assembly in Drosophila S2 cells. Science. 2007 Apr 20; 316(5823):417-21. Goshima G, Wollman R, Goodwin SS, Zhang N, Scholey JM, Vale RD, Stuurman N. PMID: 17412918; PMCID: PMC2837481.
      View in: PubMed   Mentions: 308     Fields:    Translation:AnimalsCells
    30. A homotetrameric kinesin-5, KLP61F, bundles microtubules and antagonizes Ncd in motility assays. Curr Biol. 2006 Dec 05; 16(23):2293-302. Tao L, Mogilner A, Civelekoglu-Scholey G, Wollman R, Evans J, Stahlberg H, Scholey JM. PMID: 17141610.
      View in: PubMed   Mentions: 66     Fields:    Translation:AnimalsCells
    31. Modeling mitosis. Trends Cell Biol. 2006 Feb; 16(2):88-96. Mogilner A, Wollman R, Civelekoglu-Scholey G, Scholey J. PMID: 16406522.
      View in: PubMed   Mentions: 37     Fields:    Translation:HumansAnimalsCells
    32. APC and EB1 function together in mitosis to regulate spindle dynamics and chromosome alignment. Mol Biol Cell. 2005 Oct; 16(10):4609-22. Green RA, Wollman R, Kaplan KB. PMID: 16030254; PMCID: PMC1237068.
      View in: PubMed   Mentions: 108     Fields:    Translation:HumansCells
    33. QuasiMotiFinder: protein annotation by searching for evolutionarily conserved motif-like patterns. Nucleic Acids Res. 2005 Jul 01; 33(Web Server issue):W255-61. Gutman R, Berezin C, Wollman R, Rosenberg Y, Ben-Tal N. PMID: 15980465; PMCID: PMC1160256.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
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