Steven Erik Jacobsen

Title(s)Professor, Molecular, Cell and Developmental Biology
SchoolCollege of Letters and Science
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    Other Positions
    Title(s)Professor, Biological Chemistry


    Collapse Research 
    Collapse Research Activities and Funding
    Epigenetic gene regulation in Arabidopsis
    NIH R35GM130272Feb 1, 2019 - Jan 31, 2024
    Role: Principal Investigator
    2007 Epigenetics Gordon Research Conference
    NIH R13HD056518Jul 20, 2007 - Jun 30, 2008
    Role: Principal Investigator
    Genetics of DNA methylation patterning of arabidopsis.
    NIH R37GM060398Jan 1, 2000 - Dec 31, 2018
    Role: Principal Investigator
    Genetics of DNA Methylation Patterning of Arabidopsis
    NIH R01GM060398Jan 1, 2000 - Dec 31, 2008
    Role: Principal Investigator
    SPATIAL REGULATION OF A THALIANA FLORAL HOMEOTIC GENES
    NIH F32GM015964Sep 30, 1993
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Mutations in DNA polymerase δ subunit 1 co-segregate with CMD2-type resistance to Cassava Mosaic Geminiviruses. Nat Commun. 2022 07 07; 13(1):3933. Lim YW, Mansfeld BN, Schläpfer P, Gilbert KB, Narayanan NN, Qi W, Wang Q, Zhong Z, Boyher A, Gehan J, Beyene G, Lin ZD, Esuma W, Feng S, Chanez C, Eggenberger N, Adiga G, Alicai T, Jacobsen SE, Taylor NJ, Gruissem W, Bart RS. PMID: 35798722; PMCID: PMC9262879.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    2. Comprehensive identification of SWI/SNF complex subunits underpins deep eukaryotic ancestry and reveals new plant components. Commun Biol. 2022 06 06; 5(1):549. Hernández-García J, Diego-Martin B, Kuo PH, Jami-Alahmadi Y, Vashisht AA, Wohlschlegel J, Jacobsen SE, Blázquez MA, Gallego-Bartolomé J. PMID: 35668117; PMCID: PMC9170682.
      View in: PubMed   Mentions: 1  Translation:AnimalsCells
    3. A SYBR Gold-based Label-free in vitro Dicing Assay. Bio Protoc. 2022 Apr 05; 12(7):e4382. Wang Q, Xue Y, Zhang L, Zhong Z, Feng S, Wang C, Xiao L, Yang Z, Harris JC, Wu Z, Zhai J, Yang M, Li S, Jacobsen SE, Du J. PMID: 35530519; PMCID: PMC9018436.
      View in: PubMed   Mentions:
    4. CRISPR-Cas-mediated transcriptional control and epi-mutagenesis. Plant Physiol. 2022 03 28; 188(4):1811-1824. Gardiner J, Ghoshal B, Wang M, Jacobsen SE. PMID: 35134247; PMCID: PMC8968285.
      View in: PubMed   Mentions: 2     Fields:    
    5. The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis. Proc Natl Acad Sci U S A. 2022 01 18; 119(3). Potok ME, Zhong Z, Picard CL, Liu Q, Do T, Jacobsen CE, Sakr O, Naranbaatar B, Thilakaratne R, Khnkoyan Z, Purl M, Cheng H, Vervaet H, Feng S, Rayatpisheh S, Wohlschlegel JA, O'Malley RC, Ecker JR, Jacobsen SE. PMID: 35027454; PMCID: PMC8784105.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    6. The role of MORC3 in silencing transposable elements in mouse embryonic stem cells. Epigenetics Chromatin. 2021 10 27; 14(1):49. Desai VP, Chouaref J, Wu H, Pastor WA, Kan RL, Oey HM, Li Z, Ho J, Vonk KKD, San Leon Granado D, Christopher MA, Clark AT, Jacobsen SE, Daxinger L. PMID: 34706774; PMCID: PMC8555065.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    7. MORC3, a novel MIWI2 association partner, as an epigenetic regulator of piRNA dependent transposon silencing in male germ cells. Sci Rep. 2021 10 14; 11(1):20472. Kojima-Kita K, Kuramochi-Miyagawa S, Nakayama M, Miyata H, Jacobsen SE, Ikawa M, Koseki H, Nakano T. PMID: 34650118; PMCID: PMC8516955.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    8. Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation. Science. 2021 Nov 26; 374(6571):1152-1157. Wang Q, Xue Y, Zhang L, Zhong Z, Feng S, Wang C, Xiao L, Yang Z, Harris CJ, Wu Z, Zhai J, Yang M, Li S, Jacobsen SE, Du J. PMID: 34648373; PMCID: PMC8682726.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    9. Plant genome engineering from lab to field-a Keystone Symposia report. Ann N Y Acad Sci. 2021 12; 1506(1):35-54. Cable J, Ronald PC, Voytas D, Zhang F, Levy AA, Takatsuka A, Arimura SI, Jacobsen SE, Toki S, Toda E, Gao C, Zhu JK, Boch J, Van Eck J, Mahfouz M, Andersson M, Fridman E, Weiss T, Wang K, Qi Y, Jores T, Adams T, Bagchi R. PMID: 34435370.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    10. Arabidopsis MORC proteins function in the efficient establishment of RNA directed DNA methylation. Nat Commun. 2021 07 13; 12(1):4292. Xue Y, Zhong Z, Harris CJ, Gallego-Bartolomé J, Wang M, Picard C, Cao X, Hua S, Kwok I, Feng S, Jami-Alahmadi Y, Sha J, Gardiner J, Wohlschlegel J, Jacobsen SE. PMID: 34257299; PMCID: PMC8277788.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    11. CRISPR-based targeting of DNA methylation in Arabidopsis thaliana by a bacterial CG-specific DNA methyltransferase. Proc Natl Acad Sci U S A. 2021 06 08; 118(23). Ghoshal B, Picard CL, Vong B, Feng S, Jacobsen SE. PMID: 34074795; PMCID: PMC8201958.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    12. MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO. Science. 2021 Jun 03. Ichino L, Boone BA, Strauskulage L, Harris CJ, Kaur G, Gladstone MA, Tan M, Feng S, Jami-Alahmadi Y, Duttke SH, Wohlschlegel JA, Cheng X, Redding S, Jacobsen SE. PMID: 34083448; PMCID: PMC8639832.
      View in: PubMed   Mentions: 6     Fields:    
    13. Ectopic targeting of CG DNA methylation in Arabidopsis with the bacterial SssI methyltransferase. Nat Commun. 2021 05 25; 12(1):3130. Liu W, Gallego-Bartolomé J, Zhou Y, Zhong Z, Wang M, Wongpalee SP, Gardiner J, Feng S, Kuo PH, Jacobsen SE. PMID: 34035251; PMCID: PMC8149686.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    14. The histone variant H2A.W and linker histone H1 co-regulate heterochromatin accessibility and DNA methylation. Nat Commun. 2021 05 11; 12(1):2683. Bourguet P, Picard CL, Yelagandula R, Pélissier T, Lorkovic ZJ, Feng S, Pouch-Pélissier MN, Schmücker A, Jacobsen SE, Berger F, Mathieu O. PMID: 33976212; PMCID: PMC8113232.
      View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsCells
    15. Whole-genome characterization of chronological age-associated changes in methylome and circular RNAs in moso bamboo (Phyllostachys edulis) from vegetative to floral growth. Plant J. 2021 04; 106(2):435-453. Zhang Z, Wang H, Wang Y, Xi F, Wang H, Kohnen MV, Gao P, Wei W, Chen K, Liu X, Gao Y, Han X, Hu K, Zhang H, Zhu Q, Zheng Y, Liu B, Ahmad A, Hsu YH, Jacobsen SE, Gu L. PMID: 33506534.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    16. SNPC-1.3 is a sex-specific transcription factor that drives male piRNA expression in C. elegans. Elife. 2021 02 15; 10. Choi CP, Tay RJ, Starostik MR, Feng S, Moresco JJ, Montgomery BE, Xu E, Hammonds MA, Schatz MC, Montgomery TA, Yates JR, Jacobsen SE, Kim JK. PMID: 33587037; PMCID: PMC7884074.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    17. DNA methylation-linked chromatin accessibility affects genomic architecture in Arabidopsis. Proc Natl Acad Sci U S A. 2021 02 02; 118(5). Zhong Z, Feng S, Duttke SH, Potok ME, Zhang Y, Gallego-Bartolomé J, Liu W, Jacobsen SE. PMID: 33495321; PMCID: PMC7865151.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    18. A viral guide RNA delivery system for CRISPR-based transcriptional activation and heritable targeted DNA demethylation in Arabidopsis thaliana. PLoS Genet. 2020 12; 16(12):e1008983. Ghoshal B, Vong B, Picard CL, Feng S, Tam JM, Jacobsen SE. PMID: 33315895; PMCID: PMC7769603.
      View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsCells
    19. DNA polymerase epsilon is required for heterochromatin maintenance in Arabidopsis. Genome Biol. 2020 11 25; 21(1):283. Bourguet P, López-González L, Gómez-Zambrano Á, Pélissier T, Hesketh A, Potok ME, Pouch-Pélissier MN, Perez M, Da Ines O, Latrasse D, White CI, Jacobsen SE, Benhamed M, Mathieu O. PMID: 33234150; PMCID: PMC7687843.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    20. Efficient and accurate determination of genome-wide DNA methylation patterns in Arabidopsis thaliana with enzymatic methyl sequencing. Epigenetics Chromatin. 2020 10 07; 13(1):42. Feng S, Zhong Z, Wang M, Jacobsen SE. PMID: 33028374; PMCID: PMC7542392.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    21. CRISPR-CasΦ from huge phages is a hypercompact genome editor. Science. 2020 07 17; 369(6501):333-337. Pausch P, Al-Shayeb B, Bisom-Rapp E, Tsuchida CA, Li Z, Cress BF, Knott GJ, Jacobsen SE, Banfield JF, Doudna JA. PMID: 32675376; PMCID: PMC8207990.
      View in: PubMed   Mentions: 100     Fields:    Translation:Cells
    22. Promoter and Terminator Optimization for DNA Methylation Targeting in Arabidopsis. Epigenomes. 2020 Jun 12; 4(2). Gardiner J, Zhao JM, Chaffin K, Jacobsen SE. PMID: 34968243; PMCID: PMC8594676.
      View in: PubMed   Mentions: 1  
    23. NAP1-RELATED PROTEIN1 and 2 negatively regulate H2A.Z abundance in chromatin in Arabidopsis. Nat Commun. 2020 06 08; 11(1):2887. Wang Y, Zhong Z, Zhang Y, Xu L, Feng S, Rayatpisheh S, Wohlschlegel JA, Wang Z, Jacobsen SE, Ausin I. PMID: 32513971; PMCID: PMC7280298.
      View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsCells
    24. The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis. Nat Commun. 2020 06 03; 11(1):2798. Liu Q, Bischof S, Harris CJ, Zhong Z, Zhan L, Nguyen C, Rashoff A, Barshop WD, Sun F, Feng S, Potok M, Gallego-Bartolome J, Zhai J, Wohlschlegel JA, Carey MF, Long JA, Jacobsen SE. PMID: 32493925; PMCID: PMC7271234.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    25. The plant mobile domain proteins MAIN and MAIL1 interact with the phosphatase PP7L to regulate gene expression and silence transposable elements in Arabidopsis thaliana. PLoS Genet. 2020 04; 16(4):e1008324. Nicolau M, Picault N, Descombin J, Jami-Alahmadi Y, Feng S, Bucher E, Jacobsen SE, Deragon JM, Wohlschlegel J, Moissiard G. PMID: 32287271; PMCID: PMC7156037.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    26. A kinesin Klp10A mediates cell cycle-dependent shuttling of Piwi between nucleus and nuage. PLoS Genet. 2020 03; 16(3):e1008648. Venkei ZG, Choi CP, Feng S, Chen C, Jacobsen SE, Kim JK, Yamashita YM. PMID: 32168327; PMCID: PMC7094869.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    27. CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation. Nat Commun. 2019 09 02; 10(1):3916. Wongpalee SP, Liu S, Gallego-Bartolomé J, Leitner A, Aebersold R, Liu W, Yen L, Nohales MA, Kuo PH, Vashisht AA, Wohlschlegel JA, Feng S, Kay SA, Zhou ZH, Jacobsen SE. PMID: 31477705; PMCID: PMC6718625.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    28. The Gene-Silencing Protein MORC-1 Topologically Entraps DNA and Forms Multimeric Assemblies to Cause DNA Compaction. Mol Cell. 2019 08 22; 75(4):700-710.e6. Kim H, Yen L, Wongpalee SP, Kirshner JA, Mehta N, Xue Y, Johnston JB, Burlingame AL, Kim JK, Loparo JJ, Jacobsen SE. PMID: 31442422; PMCID: PMC6814019.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    29. Arabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. Nat Commun. 2019 07 26; 10(1):3352. Potok ME, Wang Y, Xu L, Zhong Z, Liu W, Feng S, Naranbaatar B, Rayatpisheh S, Wang Z, Wohlschlegel JA, Ausin I, Jacobsen SE. PMID: 31350403; PMCID: PMC6659704.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    30. Multi-level Modulation of Light Signaling by GIGANTEA Regulates Both the Output and Pace of the Circadian Clock. Dev Cell. 2019 06 17; 49(6):840-851.e8. Nohales MA, Liu W, Duffy T, Nozue K, Sawa M, Pruneda-Paz JL, Maloof JN, Jacobsen SE, Kay SA. PMID: 31105011; PMCID: PMC6597437.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    31. Genome mining and biosynthesis of a polyketide from a biofertilizer fungus that can facilitate reductive iron assimilation in plant. Proc Natl Acad Sci U S A. 2019 03 19; 116(12):5499-5504. Chen M, Liu Q, Gao SS, Young AE, Jacobsen SE, Tang Y. PMID: 30842286; PMCID: PMC6431147.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    32. Site-specific manipulation of Arabidopsis loci using CRISPR-Cas9 SunTag systems. Nat Commun. 2019 02 13; 10(1):729. Papikian A, Liu W, Gallego-Bartolomé J, Jacobsen SE. PMID: 30760722; PMCID: PMC6374409.
      View in: PubMed   Mentions: 63     Fields:    Translation:AnimalsCells
    33. Co-targeting RNA Polymerases IV and V Promotes Efficient De Novo DNA Methylation in Arabidopsis. Cell. 2019 02 21; 176(5):1068-1082.e19. Gallego-Bartolomé J, Liu W, Kuo PH, Feng S, Ghoshal B, Gardiner J, Zhao JM, Park SY, Chory J, Jacobsen SE. PMID: 30739798; PMCID: PMC6386582.
      View in: PubMed   Mentions: 42     Fields:    Translation:AnimalsCells
    34. ADCP1: a novel plant H3K9me2 reader. Cell Res. 2019 01; 29(1):6-7. Harris CJ, Jacobsen SE. PMID: 30514899; PMCID: PMC6318331.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    35. The TFAP2C-Regulated OCT4 Naive Enhancer Is Involved in Human Germline Formation. Cell Rep. 2018 12 26; 25(13):3591-3602.e5. Chen D, Liu W, Zimmerman J, Pastor WA, Kim R, Hosohama L, Ho J, Aslanyan M, Gell JJ, Jacobsen SE, Clark AT. PMID: 30590035; PMCID: PMC6342560.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    36. A DNA methylation reader complex that enhances gene transcription. Science. 2018 12 07; 362(6419):1182-1186. Harris CJ, Scheibe M, Wongpalee SP, Liu W, Cornett EM, Vaughan RM, Li X, Chen W, Xue Y, Zhong Z, Yen L, Barshop WD, Rayatpisheh S, Gallego-Bartolome J, Groth M, Wang Z, Wohlschlegel JA, Du J, Rothbart SB, Butter F, Jacobsen SE. PMID: 30523112; PMCID: PMC6353633.
      View in: PubMed   Mentions: 68     Fields:    Translation:AnimalsCells
    37. A Nucleosome Bridging Mechanism for Activation of a Maintenance DNA Methyltransferase. Mol Cell. 2019 01 03; 73(1):73-83.e6. Stoddard CI, Feng S, Campbell MG, Liu W, Wang H, Zhong X, Bernatavichute Y, Cheng Y, Jacobsen SE, Narlikar GJ. PMID: 30415948; PMCID: PMC6407616.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    38. The impact and prospect of natural product discovery in agriculture: New technologies to explore the diversity of secondary metabolites in plants and microorganisms for applications in agriculture. EMBO Rep. 2018 11; 19(11). Yan Y, Liu Q, Jacobsen SE, Tang Y. PMID: 30361392; PMCID: PMC6216283.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    39. Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation. Proc Natl Acad Sci U S A. 2018 09 11; 115(37):E8793-E8802. Li X, Harris CJ, Zhong Z, Chen W, Liu R, Jia B, Wang Z, Li S, Jacobsen SE, Du J. PMID: 30150382; PMCID: PMC6140468.
      View in: PubMed   Mentions: 34     Fields:    Translation:AnimalsCells
    40. Epigenome-wide association in adipose tissue from the METSIM cohort. Hum Mol Genet. 2018 07 15; 27(14):2586. Orozco LD, Farrell C, Hale C, Rubbi L, Rinaldi A, Civelek M, Pan C, Lam L, Montoya D, Edillor C, Seldin M, Boehnke M, Mohlke KL, Jacobsen S, Kuusisto J, Laakso M, Lusis AJ, Pellegrini M. PMID: 29893869; PMCID: PMC6030960.
      View in: PubMed   Mentions: 5     Fields:    
    41. Resistance-gene-directed discovery of a natural-product herbicide with a new mode of action. Nature. 2018 07; 559(7714):415-418. Yan Y, Liu Q, Zang X, Yuan S, Bat-Erdene U, Nguyen C, Gan J, Zhou J, Jacobsen SE, Tang Y. PMID: 29995859; PMCID: PMC6097235.
      View in: PubMed   Mentions: 48     Fields:    Translation:Animals
    42. Epigenome-wide association in adipose tissue from the METSIM cohort. Hum Mol Genet. 2018 05 15; 27(10):1830-1846. Orozco LD, Farrell C, Hale C, Rubbi L, Rinaldi A, Civelek M, Pan C, Lam L, Montoya D, Edillor C, Seldin M, Boehnke M, Mohlke KL, Jacobsen S, Kuusisto J, Laakso M, Lusis AJ, Pellegrini M. PMID: 29566149; PMCID: PMC5932563.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    43. TFAP2C regulates transcription in human naive pluripotency by opening enhancers. Nat Cell Biol. 2018 05; 20(5):553-564. Pastor WA, Liu W, Chen D, Ho J, Kim R, Hunt TJ, Lukianchikov A, Liu X, Polo JM, Jacobsen SE, Clark AT. PMID: 29695788; PMCID: PMC5926822.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansAnimalsCells
    44. Targeted DNA demethylation of the Arabidopsis genome using the human TET1 catalytic domain. Proc Natl Acad Sci U S A. 2018 02 27; 115(9):E2125-E2134. Gallego-Bartolomé J, Gardiner J, Liu W, Papikian A, Ghoshal B, Kuo HY, Zhao JM, Segal DJ, Jacobsen SE. PMID: 29444862; PMCID: PMC5834696.
      View in: PubMed   Mentions: 63     Fields:    Translation:HumansAnimalsCells
    45. RNA-directed DNA methylation involves co-transcriptional small-RNA-guided slicing of polymerase V transcripts in Arabidopsis. Nat Plants. 2018 03; 4(3):181-188. Liu W, Duttke SH, Hetzel J, Groth M, Feng S, Gallego-Bartolome J, Zhong Z, Kuo HY, Wang Z, Zhai J, Chory J, Jacobsen SE. PMID: 29379150; PMCID: PMC5832601.
      View in: PubMed   Mentions: 37     Fields:    Translation:AnimalsCells
    46. Large-scale comparative epigenomics reveals hierarchical regulation of non-CG methylation in Arabidopsis. Proc Natl Acad Sci U S A. 2018 01 30; 115(5):E1069-E1074. Zhang Y, Harris CJ, Liu Q, Liu W, Ausin I, Long Y, Xiao L, Feng L, Chen X, Xie Y, Chen X, Zhan L, Feng S, Li JJ, Wang H, Zhai J, Jacobsen SE. PMID: 29339507; PMCID: PMC5798360.
      View in: PubMed   Mentions: 26     Fields:    Translation:AnimalsCells
    47. Correction: In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse. Elife. 2017 08 31; 6. Morselli M, Pastor WA, Montanini B, Nee K, Ferrari R, Fu K, Bonora G, Rubbi L, Clark AT, Ottonello S, Jacobsen SE, Pellegrini M. PMID: 28858608; PMCID: PMC5578735.
      View in: PubMed   Mentions: 1     Fields:    
    48. MORC-1 Integrates Nuclear RNAi and Transgenerational Chromatin Architecture to Promote Germline Immortality. Dev Cell. 2017 05 22; 41(4):408-423.e7. Weiser NE, Yang DX, Feng S, Kalinava N, Brown KC, Khanikar J, Freeberg MA, Snyder MJ, Csankovszki G, Chan RC, Gu SG, Montgomery TA, Jacobsen SE, Kim JK. PMID: 28535375; PMCID: PMC5527976.
      View in: PubMed   Mentions: 25     Fields:    Translation:AnimalsCells
    49. The histone H3 variant H3.3 regulates gene body DNA methylation in Arabidopsis thaliana. Genome Biol. 2017 05 18; 18(1):94. Wollmann H, Stroud H, Yelagandula R, Tarutani Y, Jiang D, Jing L, Jamge B, Takeuchi H, Holec S, Nie X, Kakutani T, Jacobsen SE, Berger F. PMID: 28521766; PMCID: PMC5437678.
      View in: PubMed   Mentions: 37     Fields:    Translation:AnimalsCells
    50. Corrigendum: SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation. Nature. 2017 03 02; 543(7643):136. Johnson LM, Du J, Hale CJ, Bischof S, Feng S, Chodavarapu RK, Zhong X, Marson G, Pellegrini M, Segal DJ, Patel DJ, Jacobsen SE. PMID: 28178234.
      View in: PubMed   Mentions:    Fields:    
    51. Germline competency of human embryonic stem cells depends on eomesodermin. Biol Reprod. 2017 01 01; 97(6):850-861. Chen D, Liu W, Lukianchikov A, Hancock GV, Zimmerman J, Lowe MG, Kim R, Galic Z, Irie N, Surani MA, Jacobsen SE, Clark AT. PMID: 29091993; PMCID: PMC5803789.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansCells
    52. Large-scale heterochromatin remodeling linked to overreplication-associated DNA damage. Proc Natl Acad Sci U S A. 2017 01 10; 114(2):406-411. Feng W, Hale CJ, Over RS, Cokus SJ, Jacobsen SE, Michaels SD. PMID: 28028228; PMCID: PMC5240675.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    53. Evidence for ARGONAUTE4-DNA interactions in RNA-directed DNA methylation in plants. Genes Dev. 2016 12 01; 30(23):2565-2570. Lahmy S, Pontier D, Bies-Etheve N, Laudié M, Feng S, Jobet E, Hale CJ, Cooke R, Hakimi MA, Angelov D, Jacobsen SE, Lagrange T. PMID: 27986858; PMCID: PMC5204349.
      View in: PubMed   Mentions: 25     Fields:    Translation:Cells
    54. DNA methylome of the 20-gigabase Norway spruce genome. Proc Natl Acad Sci U S A. 2016 12 13; 113(50):E8106-E8113. Ausin I, Feng S, Yu C, Liu W, Kuo HY, Jacobsen EL, Zhai J, Gallego-Bartolome J, Wang L, Egertsdotter U, Street NR, Jacobsen SE, Wang H. PMID: 27911846; PMCID: PMC5167160.
      View in: PubMed   Mentions: 32     Fields:    Translation:AnimalsCells
    55. Mouse MORC3 is a GHKL ATPase that localizes to H3K4me3 marked chromatin. Proc Natl Acad Sci U S A. 2016 08 30; 113(35):E5108-16. Li S, Yen L, Pastor WA, Johnston JB, Du J, Shew CJ, Liu W, Ho J, Stender B, Clark AT, Burlingame AL, Daxinger L, Patel DJ, Jacobsen SE. PMID: 27528681; PMCID: PMC5024608.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    56. On the origin and evolutionary consequences of gene body DNA methylation. Proc Natl Acad Sci U S A. 2016 08 09; 113(32):9111-6. Bewick AJ, Ji L, Niederhuth CE, Willing EM, Hofmeister BT, Shi X, Wang L, Lu Z, Rohr NA, Hartwig B, Kiefer C, Deal RB, Schmutz J, Grimwood J, Stroud H, Jacobsen SE, Schneeberger K, Zhang X, Schmitz RJ. PMID: 27457936; PMCID: PMC4987809.
      View in: PubMed   Mentions: 106     Fields:    Translation:AnimalsCells
    57. MTHFD1 controls DNA methylation in Arabidopsis. Nat Commun. 2016 06 13; 7:11640. Groth M, Moissiard G, Wirtz M, Wang H, Garcia-Salinas C, Ramos-Parra PA, Bischof S, Feng S, Cokus SJ, John A, Smith DC, Zhai J, Hale CJ, Long JA, Hell R, Díaz de la Garza RI, Jacobsen SE. PMID: 27291711; PMCID: PMC4909953.
      View in: PubMed   Mentions: 23     Fields:    Translation:AnimalsCells
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    122. The de novo cytosine methyltransferase DRM2 requires intact UBA domains and a catalytically mutated paralog DRM3 during RNA-directed DNA methylation in Arabidopsis thaliana. PLoS Genet. 2010 Oct 28; 6(10):e1001182. Henderson IR, Deleris A, Wong W, Zhong X, Chin HG, Horwitz GA, Kelly KA, Pradhan S, Jacobsen SE. PMID: 21060858; PMCID: PMC2965745.
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    123. Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases. Nature. 2010 Aug 19; 466(7309):987-91. Jacob Y, Stroud H, Leblanc C, Feng S, Zhuo L, Caro E, Hassel C, Gutierrez C, Michaels SD, Jacobsen SE. PMID: 20631708; PMCID: PMC2964344.
      View in: PubMed   Mentions: 84     Fields:    Translation:AnimalsCells
    124. Relationship between nucleosome positioning and DNA methylation. Nature. 2010 Jul 15; 466(7304):388-92. Chodavarapu RK, Feng S, Bernatavichute YV, Chen PY, Stroud H, Yu Y, Hetzel JA, Kuo F, Kim J, Cokus SJ, Casero D, Bernal M, Huijser P, Clark AT, Krämer U, Merchant SS, Zhang X, Jacobsen SE, Pellegrini M. PMID: 20512117; PMCID: PMC2964354.
      View in: PubMed   Mentions: 335     Fields:    Translation:HumansAnimalsCells
    125. A protein complex required for polymerase V transcripts and RNA- directed DNA methylation in Arabidopsis. Curr Biol. 2010 May 25; 20(10):951-6. Law JA, Ausin I, Johnson LM, Vashisht AA, Zhu JK, Wohlschlegel JA, Jacobsen SE. PMID: 20409711; PMCID: PMC2972704.
      View in: PubMed   Mentions: 105     Fields:    Translation:AnimalsCells
    126. Conservation and divergence of methylation patterning in plants and animals. Proc Natl Acad Sci U S A. 2010 May 11; 107(19):8689-94. Feng S, Cokus SJ, Zhang X, Chen PY, Bostick M, Goll MG, Hetzel J, Jain J, Strauss SH, Halpern ME, Ukomadu C, Sadler KC, Pradhan S, Pellegrini M, Jacobsen SE. PMID: 20395551; PMCID: PMC2889301.
      View in: PubMed   Mentions: 523     Fields:    Translation:AnimalsCells
    127. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet. 2010 Mar; 11(3):204-20. Law JA, Jacobsen SE. PMID: 20142834; PMCID: PMC3034103.
      View in: PubMed   Mentions: 1407     Fields:    Translation:AnimalsCells
    128. Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency. Nature. 2010 Feb 25; 463(7284):1101-5. Popp C, Dean W, Feng S, Cokus SJ, Andrews S, Pellegrini M, Jacobsen SE, Reik W. PMID: 20098412; PMCID: PMC2965733.
      View in: PubMed   Mentions: 382     Fields:    Translation:AnimalsCells
    129. Accurate sodium bisulfite sequencing in plants. Epigenetics. 2010 Jan 01; 5(1):47-9. Henderson IR, Chan SR, Cao X, Johnson L, Jacobsen SE. PMID: 20081358; PMCID: PMC2829377.
      View in: PubMed   Mentions: 28     Fields:    Translation:AnimalsCells
    130. IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana. Nat Struct Mol Biol. 2009 Dec; 16(12):1325-7. Ausin I, Mockler TC, Chory J, Jacobsen SE. PMID: 19915591; PMCID: PMC2842998.
      View in: PubMed   Mentions: 59     Fields:    Translation:AnimalsCells
    131. SET7/9 mediated methylation of non-histone proteins in mammalian cells. Epigenetics. 2009 Aug 16; 4(6):383-7. Pradhan S, Chin HG, Estève PO, Jacobsen SE. PMID: 19684477; PMCID: PMC2974562.
      View in: PubMed   Mentions: 57     Fields:    Translation:HumansAnimalsCells
    132. A metastable DWARF1 epigenetic mutant affecting plant stature in rice. Proc Natl Acad Sci U S A. 2009 Jul 07; 106(27):11218-23. Miura K, Agetsuma M, Kitano H, Yoshimura A, Matsuoka M, Jacobsen SE, Ashikari M. PMID: 19541604; PMCID: PMC2708680.
      View in: PubMed   Mentions: 62     Fields:    Translation:AnimalsCells
    133. Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana. Genome Biol. 2009; 10(6):R62. Zhang X, Bernatavichute YV, Cokus S, Pellegrini M, Jacobsen SE. PMID: 19508735; PMCID: PMC2718496.
      View in: PubMed   Mentions: 232     Fields:    Translation:AnimalsCells
    134. ATXR5 and ATXR6 are H3K27 monomethyltransferases required for chromatin structure and gene silencing. Nat Struct Mol Biol. 2009 Jul; 16(7):763-8. Jacob Y, Feng S, LeBlanc CA, Bernatavichute YV, Stroud H, Cokus S, Johnson LM, Pellegrini M, Jacobsen SE, Michaels SD. PMID: 19503079; PMCID: PMC2754316.
      View in: PubMed   Mentions: 122     Fields:    Translation:AnimalsCells
    135. Molecular biology. Dynamic DNA methylation. Science. 2009 Mar 20; 323(5921):1568-9. Law JA, Jacobsen SE. PMID: 19299607.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    136. Regulation of DNMT1 stability through SET7-mediated lysine methylation in mammalian cells. Proc Natl Acad Sci U S A. 2009 Mar 31; 106(13):5076-81. Estève PO, Chin HG, Benner J, Feehery GR, Samaranayake M, Horwitz GA, Jacobsen SE, Pradhan S. PMID: 19282482; PMCID: PMC2654809.
      View in: PubMed   Mentions: 143     Fields:    Translation:HumansAnimalsCells
    137. Determining the conservation of DNA methylation in Arabidopsis. Epigenetics. 2009 Feb 16; 4(2):119-24. Widman N, Jacobsen SE, Pellegrini M. PMID: 19384058.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    138. Criteria for annotation of plant MicroRNAs. Plant Cell. 2008 Dec; 20(12):3186-90. Meyers BC, Axtell MJ, Bartel B, Bartel DP, Baulcombe D, Bowman JL, Cao X, Carrington JC, Chen X, Green PJ, Griffiths-Jones S, Jacobsen SE, Mallory AC, Martienssen RA, Poethig RS, Qi Y, Vaucheret H, Voinnet O, Watanabe Y, Weigel D, Zhu JK. PMID: 19074682; PMCID: PMC2630443.
      View in: PubMed   Mentions: 612     Fields:    
    139. UHRF1 binds G9a and participates in p21 transcriptional regulation in mammalian cells. Nucleic Acids Res. 2009 Feb; 37(2):493-505. Kim JK, Estève PO, Jacobsen SE, Pradhan S. PMID: 19056828; PMCID: PMC2632929.
      View in: PubMed   Mentions: 109     Fields:    Translation:HumansAnimalsCells
    140. SRA-domain proteins required for DRM2-mediated de novo DNA methylation. PLoS Genet. 2008 Nov; 4(11):e1000280. Johnson LM, Law JA, Khattar A, Henderson IR, Jacobsen SE. PMID: 19043555; PMCID: PMC2582956.
      View in: PubMed   Mentions: 77     Fields:    Translation:AnimalsCells
    141. ORTH/VIM proteins that regulate DNA methylation are functional ubiquitin E3 ligases. Plant J. 2008 Dec; 56(5):704-15. Kraft E, Bostick M, Jacobsen SE, Callis J. PMID: 18643997; PMCID: PMC2973330.
      View in: PubMed   Mentions: 27     Fields:    Translation:AnimalsCells
    142. Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana. PLoS One. 2008 Sep 08; 3(9):e3156. Bernatavichute YV, Zhang X, Cokus S, Pellegrini M, Jacobsen SE. PMID: 18776934; PMCID: PMC2522283.
      View in: PubMed   Mentions: 157     Fields:    Translation:AnimalsCells
    143. The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix. Nature. 2008 Oct 09; 455(7214):826-9. Hashimoto H, Horton JR, Zhang X, Bostick M, Jacobsen SE, Cheng X. PMID: 18772888; PMCID: PMC2602803.
      View in: PubMed   Mentions: 205     Fields:    Translation:AnimalsCells
    144. Sequencing sliced ends reveals microRNA targets. Nat Biotechnol. 2008 Aug; 26(8):881-2. Henderson IR, Jacobsen SE. PMID: 18688239; PMCID: PMC2989925.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    145. Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading. Genes Dev. 2008 Jun 15; 22(12):1597-606. Henderson IR, Jacobsen SE. PMID: 18559476; PMCID: PMC2428058.
      View in: PubMed   Mentions: 108     Fields:    Translation:AnimalsCells
    146. The impact of Arabidopsis on human health: diversifying our portfolio. Cell. 2008 Jun 13; 133(6):939-43. Jones AM, Chory J, Dangl JL, Estelle M, Jacobsen SE, Meyerowitz EM, Nordborg M, Weigel D. PMID: 18555767; PMCID: PMC3124625.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansAnimals
    147. Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning. Nature. 2008 Mar 13; 452(7184):215-9. Cokus SJ, Feng S, Zhang X, Chen Z, Merriman B, Haudenschild CD, Pradhan S, Nelson SF, Pellegrini M, Jacobsen SE. PMID: 18278030; PMCID: PMC2377394.
      View in: PubMed   Mentions: 922     Fields:    Translation:AnimalsCells
    148. Dynamic regulation of ARGONAUTE4 within multiple nuclear bodies in Arabidopsis thaliana. PLoS Genet. 2008 Feb; 4(2):e27. Li CF, Henderson IR, Song L, Fedoroff N, Lagrange T, Jacobsen SE. PMID: 18266474; PMCID: PMC2233678.
      View in: PubMed   Mentions: 39     Fields:    Translation:AnimalsCells
    149. Promoter methylation study of the H37/RBM5 tumor suppressor gene from the 3p21.3 human lung cancer tumor suppressor locus. Hum Genet. 2008 Feb; 123(1):55-64. Oh JJ, Boctor BN, Jimenez CA, Lopez R, Koegel AK, Taschereau EO, Phan DT, Jacobsen SE, Slamon DJ. PMID: 18038152.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    150. Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components. Genes Dev. 2007 Oct 15; 21(20):2539-44. El-Shami M, Pontier D, Lahmy S, Braun L, Picart C, Vega D, Hakimi MA, Jacobsen SE, Cooke R, Lagrange T. PMID: 17938239; PMCID: PMC2000319.
      View in: PubMed   Mentions: 152     Fields:    Translation:HumansAnimalsCells
    151. The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation. Nat Struct Mol Biol. 2007 Sep; 14(9):869-71. Zhang X, Germann S, Blus BJ, Khorasanizadeh S, Gaudin V, Jacobsen SE. PMID: 17676062.
      View in: PubMed   Mentions: 135     Fields:    Translation:AnimalsCells
    152. UHRF1 plays a role in maintaining DNA methylation in mammalian cells. Science. 2007 Sep 21; 317(5845):1760-4. Bostick M, Kim JK, Estève PO, Clark A, Pradhan S, Jacobsen SE. PMID: 17673620.
      View in: PubMed   Mentions: 580     Fields:    Translation:HumansAnimalsCells
    153. Epigenetic inheritance in plants. Nature. 2007 May 24; 447(7143):418-24. Henderson IR, Jacobsen SE. PMID: 17522675.
      View in: PubMed   Mentions: 308     Fields:    Translation:AnimalsCells
    154. Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis. PLoS Biol. 2007 May; 5(5):e129. Zhang X, Clarenz O, Cokus S, Bernatavichute YV, Pellegrini M, Goodrich J, Jacobsen SE. PMID: 17439305; PMCID: PMC1852588.
      View in: PubMed   Mentions: 312     Fields:    Translation:AnimalsCells
    155. Role of RNA polymerase IV in plant small RNA metabolism. Proc Natl Acad Sci U S A. 2007 Mar 13; 104(11):4536-41. Zhang X, Henderson IR, Lu C, Green PJ, Jacobsen SE. PMID: 17360559; PMCID: PMC1810338.
      View in: PubMed   Mentions: 128     Fields:    Translation:AnimalsCells
    156. The SRA methyl-cytosine-binding domain links DNA and histone methylation. Curr Biol. 2007 Feb 20; 17(4):379-84. Johnson LM, Bostick M, Zhang X, Kraft E, Henderson I, Callis J, Jacobsen SE. PMID: 17239600; PMCID: PMC1850948.
      View in: PubMed   Mentions: 183     Fields:    Translation:AnimalsCells
    157. Two-step recruitment of RNA-directed DNA methylation to tandem repeats. PLoS Biol. 2006 Nov; 4(11):e363. Chan SW, Zhang X, Bernatavichute YV, Jacobsen SE. PMID: 17105345; PMCID: PMC1618421.
      View in: PubMed   Mentions: 75     Fields:    Translation:AnimalsCells
    158. Plant genetics: increased outcrossing in hothead mutants. Nature. 2006 Sep 28; 443(7110):E8; discussion E8-9. Peng P, Chan SW, Shah GA, Jacobsen SE. PMID: 17006468.
      View in: PubMed   Mentions: 9     Fields:    Translation:Animals
    159. MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant. Genome Res. 2006 Oct; 16(10):1276-88. Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC. PMID: 16954541; PMCID: PMC1581437.
      View in: PubMed   Mentions: 164     Fields:    Translation:AnimalsCells
    160. Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis. Cell. 2006 Sep 22; 126(6):1189-201. Zhang X, Yazaki J, Sundaresan A, Cokus S, Chan SW, Chen H, Henderson IR, Shinn P, Pellegrini M, Jacobsen SE, Ecker JR. PMID: 16949657.
      View in: PubMed   Mentions: 752     Fields:    Translation:AnimalsCells
    161. An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana. Cell. 2006 Jul 14; 126(1):93-106. Li CF, Pontes O, El-Shami M, Henderson IR, Bernatavichute YV, Chan SW, Lagrange T, Pikaard CS, Jacobsen SE. PMID: 16839879.
      View in: PubMed   Mentions: 176     Fields:    Translation:AnimalsCells
    162. The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center. Cell. 2006 Jul 14; 126(1):79-92. Pontes O, Li CF, Costa Nunes P, Haag J, Ream T, Vitins A, Jacobsen SE, Pikaard CS. PMID: 16839878.
      View in: PubMed   Mentions: 203     Fields:    Translation:AnimalsCells
    163. RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis. PLoS Genet. 2006 Jun 02; 2(6):e83. Chan SW, Henderson IR, Zhang X, Shah G, Chien JS, Jacobsen SE. PMID: 16741558; PMCID: PMC1472700.
      View in: PubMed   Mentions: 107     Fields:    Translation:AnimalsCells
    164. Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning. Nat Genet. 2006 Jun; 38(6):721-5. Henderson IR, Zhang X, Lu C, Johnson L, Meyers BC, Green PJ, Jacobsen SE. PMID: 16699516.
      View in: PubMed   Mentions: 283     Fields:    Translation:Cells
    165. Epigenetic maintenance of the vernalized state in Arabidopsis thaliana requires LIKE HETEROCHROMATIN PROTEIN 1. Nat Genet. 2006 Jun; 38(6):706-10. Sung S, He Y, Eshoo TW, Tamada Y, Johnson L, Nakahigashi K, Goto K, Jacobsen SE, Amasino RM. PMID: 16682972.
      View in: PubMed   Mentions: 106     Fields:    Translation:Animals
    166. LHP1, the Arabidopsis homologue of HETEROCHROMATIN PROTEIN1, is required for epigenetic silencing of FLC. Proc Natl Acad Sci U S A. 2006 Mar 28; 103(13):5012-7. Mylne JS, Barrett L, Tessadori F, Mesnage S, Johnson L, Bernatavichute YV, Jacobsen SE, Fransz P, Dean C. PMID: 16549797; PMCID: PMC1458786.
      View in: PubMed   Mentions: 89     Fields:    Translation:AnimalsCells
    167. Catalytic properties and kinetic mechanism of human recombinant Lys-9 histone H3 methyltransferase SUV39H1: participation of the chromodomain in enzymatic catalysis. Biochemistry. 2006 Mar 14; 45(10):3272-84. Chin HG, Patnaik D, Estève PO, Jacobsen SE, Pradhan S. PMID: 16519522.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansAnimalsCells
    168. Methylation of tRNAAsp by the DNA methyltransferase homolog Dnmt2. Science. 2006 Jan 20; 311(5759):395-8. Goll MG, Kirpekar F, Maggert KA, Yoder JA, Hsieh CL, Zhang X, Golic KG, Jacobsen SE, Bestor TH. PMID: 16424344.
      View in: PubMed   Mentions: 403     Fields:    Translation:HumansAnimalsCells
    169. Chromatin and siRNA pathways cooperate to maintain DNA methylation of small transposable elements in Arabidopsis. Genome Biol. 2005; 6(11):R90. Tran RK, Zilberman D, de Bustos C, Ditt RF, Henikoff JG, Lindroth AM, Delrow J, Boyle T, Kwong S, Bryson TD, Jacobsen SE, Henikoff S. PMID: 16277745; PMCID: PMC1297646.
      View in: PubMed   Mentions: 45     Fields:    Translation:AnimalsCells
    170. Gardening the genome: DNA methylation in Arabidopsis thaliana. Nat Rev Genet. 2005 May; 6(5):351-60. Chan SW, Henderson IR, Jacobsen SE. PMID: 15861207.
      View in: PubMed   Mentions: 348     Fields:    Translation:AnimalsCells
    171. DDM1 binds Arabidopsis methyl-CpG binding domain proteins and affects their subnuclear localization. Plant Cell. 2005 May; 17(5):1549-58. Zemach A, Li Y, Wayburn B, Ben-Meir H, Kiss V, Avivi Y, Kalchenko V, Jacobsen SE, Grafi G. PMID: 15805479; PMCID: PMC1091773.
      View in: PubMed   Mentions: 34     Fields:    Translation:AnimalsCells
    172. DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes. Curr Biol. 2005 Jan 26; 15(2):154-9. Tran RK, Henikoff JG, Zilberman D, Ditt RF, Jacobsen SE, Henikoff S. PMID: 15668172.
      View in: PubMed   Mentions: 93     Fields:    Translation:AnimalsCells
    173. Applications of DNA tiling arrays for whole-genome analysis. Genomics. 2005 Jan; 85(1):1-15. Mockler TC, Chan S, Sundaresan A, Chen H, Jacobsen SE, Ecker JR. PMID: 15607417.
      View in: PubMed   Mentions: 102     Fields:    Translation:HumansAnimalsCells
    174. Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications. Nucleic Acids Res. 2004; 32(22):6511-8. Johnson L, Mollah S, Garcia BA, Muratore TL, Shabanowitz J, Hunt DF, Jacobsen SE. PMID: 15598823; PMCID: PMC545460.
      View in: PubMed   Mentions: 80     Fields:    Translation:Cells
    175. Substrate specificity and kinetic mechanism of mammalian G9a histone H3 methyltransferase. J Biol Chem. 2004 Dec 17; 279(51):53248-58. Patnaik D, Chin HG, Estève PO, Benner J, Jacobsen SE, Pradhan S. PMID: 15485804.
      View in: PubMed   Mentions: 70     Fields:    Translation:AnimalsCells
    176. Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3. EMBO J. 2004 Oct 27; 23(21):4286-96. Lindroth AM, Shultis D, Jasencakova Z, Fuchs J, Johnson L, Schubert D, Patnaik D, Pradhan S, Goodrich J, Schubert I, Jenuwein T, Khorasanizadeh S, Jacobsen SE. PMID: 15457214; PMCID: PMC524394.
      View in: PubMed   Mentions: 145     Fields:    Translation:HumansAnimalsCells
    177. Small interfering RNA-induced transcriptional gene silencing in human cells. Science. 2004 Aug 27; 305(5688):1289-92. Morris KV, Chan SW, Jacobsen SE, Looney DJ. PMID: 15297624.
      View in: PubMed   Mentions: 340     Fields:    Translation:HumansCells
    178. Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats. Curr Biol. 2004 Jul 13; 14(13):1214-20. Zilberman D, Cao X, Johansen LK, Xie Z, Carrington JC, Jacobsen SE. PMID: 15242620.
      View in: PubMed   Mentions: 107     Fields:    Translation:AnimalsCells
    179. Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana. Chromosoma. 2004 Mar; 112(6):308-15. Jackson JP, Johnson L, Jasencakova Z, Zhang X, PerezBurgos L, Singh PB, Cheng X, Schubert I, Jenuwein T, Jacobsen SE. PMID: 15014946.
      View in: PubMed   Mentions: 130     Fields:    Translation:AnimalsCells
    180. RNA silencing genes control de novo DNA methylation. Science. 2004 Feb 27; 303(5662):1336. Chan SW, Zilberman D, Xie Z, Johansen LK, Carrington JC, Jacobsen SE. PMID: 14988555.
      View in: PubMed   Mentions: 213     Fields:    Translation:AnimalsCells
    181. Genetic and functional diversification of small RNA pathways in plants. PLoS Biol. 2004 May; 2(5):E104. Xie Z, Johansen LK, Gustafson AM, Kasschau KD, Lellis AD, Zilberman D, Jacobsen SE, Carrington JC. PMID: 15024409; PMCID: PMC350667.
      View in: PubMed   Mentions: 629     Fields:    Translation:AnimalsCells
    182. Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation. Curr Biol. 2003 Dec 16; 13(24):2212-7. Cao X, Aufsatz W, Zilberman D, Mette MF, Huang MS, Matzke M, Jacobsen SE. PMID: 14680640.
      View in: PubMed   Mentions: 198     Fields:    Translation:AnimalsCells
    183. One-way control of FWA imprinting in Arabidopsis endosperm by DNA methylation. Science. 2004 Jan 23; 303(5657):521-3. Kinoshita T, Miura A, Choi Y, Kinoshita Y, Cao X, Jacobsen SE, Fischer RL, Kakutani T. PMID: 14631047.
      View in: PubMed   Mentions: 203     Fields:    Translation:AnimalsCells
    184. Role of CG and non-CG methylation in immobilization of transposons in Arabidopsis. Curr Biol. 2003 Mar 04; 13(5):421-6. Kato M, Miura A, Bender J, Jacobsen SE, Kakutani T. PMID: 12620192.
      View in: PubMed   Mentions: 120     Fields:    Translation:AnimalsCells
    185. ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation. Science. 2003 Jan 31; 299(5607):716-9. Zilberman D, Cao X, Jacobsen SE. PMID: 12522258.
      View in: PubMed   Mentions: 421     Fields:    Translation:AnimalsCells
    186. DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis. EMBO J. 2002 Dec 02; 21(23):6549-59. Soppe WJ, Jasencakova Z, Houben A, Kakutani T, Meister A, Huang MS, Jacobsen SE, Schubert I, Fransz PF. PMID: 12456661; PMCID: PMC136960.
      View in: PubMed   Mentions: 173     Fields:    Translation:AnimalsCells
    187. DICER-LIKE1: blind men and elephants in Arabidopsis development. Trends Plant Sci. 2002 Nov; 7(11):487-91. Schauer SE, Jacobsen SE, Meinke DW, Ray A. PMID: 12417148.
      View in: PubMed   Mentions: 179     Fields:    Translation:Animals
    188. Interplay between two epigenetic marks. DNA methylation and histone H3 lysine 9 methylation. Curr Biol. 2002 Aug 20; 12(16):1360-7. Johnson L, Cao X, Jacobsen S. PMID: 12194816.
      View in: PubMed   Mentions: 201     Fields:    Translation:AnimalsCells
    189. Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes. Proc Natl Acad Sci U S A. 2002 Dec 10; 99 Suppl 4:16491-8. Cao X, Jacobsen SE. PMID: 12151602; PMCID: PMC139913.
      View in: PubMed   Mentions: 231     Fields:    Translation:HumansAnimalsCells
    190. DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in arabidopsis. Cell. 2002 Jul 12; 110(1):33-42. Choi Y, Gehring M, Johnson L, Hannon M, Harada JJ, Goldberg RB, Jacobsen SE, Fischer RL. PMID: 12150995.
      View in: PubMed   Mentions: 272     Fields:    Translation:HumansAnimalsCells
    191. Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr Biol. 2002 Jul 09; 12(13):1138-44. Cao X, Jacobsen SE. PMID: 12121623.
      View in: PubMed   Mentions: 324     Fields:    Translation:AnimalsCells
    192. Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature. 2002 Apr 04; 416(6880):556-60. Jackson JP, Lindroth AM, Cao X, Jacobsen SE. PMID: 11898023.
      View in: PubMed   Mentions: 436     Fields:    Translation:HumansAnimalsCells
    193. Ectopic hypermethylation of flower-specific genes in Arabidopsis. Curr Biol. 2000 Feb 24; 10(4):179-86. Jacobsen SE, Sakai H, Finnegan EJ, Cao X, Meyerowitz EM. PMID: 10704409.
      View in: PubMed   Mentions: 86     Fields:    Translation:AnimalsCells
    194. Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems. Development. 1999 Dec; 126(23):5231-43. Jacobsen SE, Running MP, Meyerowitz EM. PMID: 10556049.
      View in: PubMed   Mentions: 142     Fields:    Translation:AnimalsCells
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