Hilary Ann Coller

Title(s)Professor, Molecular, Cell and Developmental Biology
SchoolCollege of Letters and Science
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    Other Positions
    Title(s)Professor, Biological Chemistry


    Collapse Research 
    Collapse Research Activities and Funding
    The Role of Stromal Autophagy in Cutaneous Melanoma
    NIH R01CA221296Jul 1, 2018 - Jun 30, 2023
    Role: Principal Investigator
    Role of Tumor and Stromal Cell Metabolism in Stress Adaptation and Progression
    NIH RC1CA147961Sep 30, 2009 - Aug 31, 2012
    Role: Co-Principal Investigator
    A Combined Computational and Experimental Approach to Defining Mechanisms of micr
    NIH R01GM086465Jan 1, 2009 - Dec 31, 2016
    Role: Principal Investigator
    The Role of MicroRNAs in Cellular Quiescence
    NIH R01GM081686Jul 1, 2008 - Jun 30, 2016
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Designed fluorescent protein cages as fiducial markers for targeted cell imaging. bioRxiv. 2024 Mar 01. Gee M, Atai K, Coller HA, Yeates TO, Castells-Graells R. PMID: 38464160; PMCID: PMC10925312.
      View in: PubMed   Mentions:
    2. Pan-cancer landscape of epigenetic factor expression predicts tumor outcome. Commun Biol. 2023 11 16; 6(1):1138. Cheng MW, Mitra M, Coller HA. PMID: 37973839; PMCID: PMC10654613.
      View in: PubMed   Mentions: 1  Translation:Humans
    3. Virtually the Same? Evaluating the Effectiveness of Remote Undergraduate Research Experiences. CBE Life Sci Educ. 2023 06; 22(2):ar25. Hess RA, Erickson OA, Cole RB, Isaacs JM, Alvarez-Clare S, Arnold J, Augustus-Wallace A, Ayoob JC, Berkowitz A, Branchaw J, Burgio KR, Cannon CH, Ceballos RM, Cohen CS, Coller H, Disney J, Doze VA, Eggers MJ, Ferguson EL, Gray JJ, Greenberg JT, Hoffmann A, Jensen-Ryan D, Kao RM, Keene AC, Kowalko JE, Lopez SA, Mathis C, Minkara M, Murren CJ, Ondrechen MJ, Ordoñez P, Osano A, Padilla-Crespo E, Palchoudhury S, Qin H, Ramírez-Lugo J, Reithel J, Shaw CA, Smith A, Smith RJ, Tsien F, Dolan EL. PMID: 37058442; PMCID: PMC10228262.
      View in: PubMed   Mentions:    Fields:    Translation:HumansPHPublic Health
    4. Screen time: an unbiased search for histone mutations that affect quiescence and chronological aging. FEBS J. 2023 07; 290(14):3533-3538. Mitra M, Coller HA. PMID: 37184984.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    5. Soft strain-insensitive bioelectronics featuring brittle materials. Science. 2022 Dec 16; 378(6625):1222-1227. Zhao Y, Wang B, Tan J, Yin H, Huang R, Zhu J, Lin S, Zhou Y, Jelinek D, Sun Z, Youssef K, Voisin L, Horrillo A, Zhang K, Wu BM, Coller HA, Lu DC, Pei Q, Emaminejad S. PMID: 36520906.
      View in: PubMed   Mentions: 3     Fields:    
    6. Highlighting recent impactful publications in Physiological Genomics. Physiol Genomics. 2022 Nov 01; 54(11):455-456. Coller HA. PMID: 36250560; PMCID: PMC9678404.
      View in: PubMed   Mentions:    Fields:    
    7. An American Physiological Society cross-journal Call for Papers on "The Physiology of Obesity". Am J Physiol Lung Cell Mol Physiol. 2022 11 01; 323(5):L593-L602. Bodine SC, Brooks HL, Coller HA, Domingos AI, Frey MR, Goodman BE, Kleyman TR, Lindsey ML, Morty RE, Petersen OH, Ramírez JM, Schaefer L, Thomsen MB, Yosten GLC. PMID: 36223636; PMCID: PMC9665636.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    8. Wearable microneedle-based electrochemical aptamer biosensing for precision dosing of drugs with narrow therapeutic windows. Sci Adv. 2022 Sep 23; 8(38):eabq4539. Lin S, Cheng X, Zhu J, Wang B, Jelinek D, Zhao Y, Wu TY, Horrillo A, Tan J, Yeung J, Yan W, Forman S, Coller HA, Milla C, Emaminejad S. PMID: 36149955; PMCID: PMC9506728.
      View in: PubMed   Mentions: 15     Fields:    
    9. Bruins-in-Genomics: Evaluation of the impact of a UCLA undergraduate summer program in computational biology on participating students. PLoS One. 2022; 17(5):e0268861. Coller HA, Beggs S, Andrews S, Maloy J, Chiu A, Sankararaman S, Pellegrini M, Freimer N, Johnson T, Papp J, Eskin E, Hoffmann A. PMID: 35622842; PMCID: PMC9140266.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    10. "How Do We Do This at a Distance?!" A Descriptive Study of Remote Undergraduate Research Programs during COVID-19. CBE Life Sci Educ. 2022 03; 21(1):ar1. Erickson OA, Cole RB, Isaacs JM, Alvarez-Clare S, Arnold J, Augustus-Wallace A, Ayoob JC, Berkowitz A, Branchaw J, Burgio KR, Cannon CH, Ceballos RM, Cohen CS, Coller H, Disney J, Doze VA, Eggers MJ, Farina S, Ferguson EL, Gray JJ, Greenberg JT, Hoffmann A, Jensen-Ryan D, Kao RM, Keene AC, Kowalko JE, Lopez SA, Mathis C, Minkara M, Murren CJ, Ondrechen MJ, Ordoñez P, Osano A, Padilla-Crespo E, Palchoudhury S, Qin H, Ramírez-Lugo J, Reithel J, Shaw CA, Smith A, Smith R, Summers AP, Tsien F, Dolan EL. PMID: 34978923; PMCID: PMC9250374.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCellsPHPublic Health
    11. Prereplication complex proteins get caught moonlighting. PLoS Biol. 2022 02; 20(2):e3001549. Coller HA. PMID: 35196311; PMCID: PMC8865667.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    12. Correction: Stressed-out yeast do not pass GO. J Cell Biol. 2022 Feb 07; 221(2). Coller HA. PMID: 35061009; PMCID: PMC8789197.
      View in: PubMed   Mentions:    Fields:    
    13. Stressed-out yeast do not pass GO. J Cell Biol. 2022 01 03; 221(1). Coller HA. PMID: 34932069; PMCID: PMC8697686.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    14. 20 years of Developmental Cell: Looking forward. Dev Cell. 2021 12 06; 56(23):3185-3191. Hiiragi T, Gladfelter AS, Miguel-Aliaga I, Coller HA, Lau OS, McBride HM, Aoki K, Linkermann A, Santaguida S, Wasteneys G, Rivron NC, Shahbazi MN, Ebisuya M, Lancaster MA. PMID: 34875224.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    15. Is There a Histone Code for Cellular Quiescence? Front Cell Dev Biol. 2021; 9:739780. Bonitto K, Sarathy K, Atai K, Mitra M, Coller HA. PMID: 34778253; PMCID: PMC8586460.
      View in: PubMed   Mentions: 5  
    16. Incoming Editor-in-Chief editorial. Physiol Genomics. 2021 07 01; 53(7):283-284. Coller HA. PMID: 34056924; PMCID: PMC8321783.
      View in: PubMed   Mentions:    Fields:    
    17. An American Physiological Society cross-journal Call for Papers on "Inter-Organ Communication in Homeostasis and Disease". Am J Physiol Lung Cell Mol Physiol. 2021 07 01; 321(1):L42-L49. Bodine SC, Brooks HL, Bunnett NW, Coller HA, Frey MR, Joe B, Kleyman TR, Lindsey ML, Marette A, Morty RE, Ramírez JM, Thomsen MB, Yosten GLC. PMID: 34010064; PMCID: PMC8321848.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    18. The return of quiescence metabolites. Nat Cell Biol. 2021 04; 23(4):303-304. Coller HA. PMID: 33795872; PMCID: PMC8240144.
      View in: PubMed   Mentions:    Fields:    
    19. A Mouse Model to Investigate the Role of Cancer-associated Fibroblasts in Tumor Growth. J Vis Exp. 2020 12 22; (166). Jelinek D, Zhang ER, Ambrus A, Haley E, Guinn E, Vo A, Le P, Kesaf AE, Nguyen J, Guo L, Frederick D, Sun Z, Guo N, Sevier P, Bilotta E, Atai K, Voisin L, Coller HA. PMID: 33427239; PMCID: PMC8238354.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    20. Intron retention is a robust marker of intertumoral heterogeneity in pancreatic ductal adenocarcinoma. NPJ Genom Med. 2020 Dec 11; 5(1):55. Tan DJ, Mitra M, Chiu AM, Coller HA. PMID: 33311498; PMCID: PMC7733475.
      View in: PubMed   Mentions: 8  
    21. Methylation of histone 4's lysine 20: a critical analysis of the state of the field. Physiol Genomics. 2021 01 01; 53(1):22-32. Corvalan AZ, Coller HA. PMID: 33197229; PMCID: PMC7847046.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    22. Splicing Busts a Move: Isoform Switching Regulates Migration: (Trends in Cell Biology 30, 74-85, 2020). Trends Cell Biol. 2020 Mar; 30(3):255. Mitra M, Lee HN, Coller HA. PMID: 32014399; PMCID: PMC8238352.
      View in: PubMed   Mentions: 1     Fields:    
    23. Regulation of Cell Cycle Entry and Exit: A Single Cell Perspective. Compr Physiol. 2019 12 18; 10(1):317-344. Coller HA. PMID: 31853969; PMCID: PMC8208229.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    24. Splicing Busts a Move: Isoform Switching Regulates Migration. Trends Cell Biol. 2020 01; 30(1):74-85. Mitra M, Lee HN, Coller HA. PMID: 31810769; PMCID: PMC8219349.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    25. The paradox of metabolism in quiescent stem cells. FEBS Lett. 2019 10; 593(20):2817-2839. Coller HA. PMID: 31531979; PMCID: PMC7034665.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansAnimalsCells
    26. Fibroblasts Prompt Tumors to Mobilize Their Glycogen Reserves. Trends Cell Biol. 2019 04; 29(4):278-280. Coller HA. PMID: 30826215; PMCID: PMC8186545.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    27. RECK isoforms differentially regulate fibroblast migration by modulating tubulin post-translational modifications. Biochem Biophys Res Commun. 2019 03 05; 510(2):211-218. Lee HN, Bosompra OA, Coller HA. PMID: 30704758; PMCID: PMC7217981.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    28. Alternative polyadenylation factors link cell cycle to migration. Genome Biol. 2018 10 25; 19(1):176. Mitra M, Johnson EL, Swamy VS, Nersesian LE, Corney DC, Robinson DG, Taylor DG, Ambrus AM, Jelinek D, Wang W, Batista SL, Coller HA. PMID: 30360761; PMCID: PMC6203201.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    29. Extracellular Matrix Remodeling Regulates Glucose Metabolism through TXNIP Destabilization. Cell. 2018 09 20; 175(1):117-132.e21. Sullivan WJ, Mullen PJ, Schmid EW, Flores A, Momcilovic M, Sharpley MS, Jelinek D, Whiteley AE, Maxwell MB, Wilde BR, Banerjee U, Coller HA, Shackelford DB, Braas D, Ayer DE, de Aguiar Vallim TQ, Lowry WE, Christofk HR. PMID: 30197082; PMCID: PMC6151140.
      View in: PubMed   Mentions: 111     Fields:    Translation:HumansCells
    30. Integrative analysis of the inter-tumoral heterogeneity of triple-negative breast cancer. Sci Rep. 2018 08 07; 8(1):11807. Chiu AM, Mitra M, Boymoushakian L, Coller HA. PMID: 30087365; PMCID: PMC6081411.
      View in: PubMed   Mentions: 28     Fields:    Translation:Humans
    31. Mapping Metabolism: Monitoring Lactate Dehydrogenase Activity Directly in Tissue. J Vis Exp. 2018 06 21; (136). Jelinek D, Flores A, Uebelhoer M, Pasque V, Plath K, Iruela-Arispe ML, Christofk HR, Lowry WE, Coller HA. PMID: 29985359; PMCID: PMC6101961.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    32. RECK isoforms have opposing effects on cell migration. Mol Biol Cell. 2018 08 01; 29(15):1825-1838. Lee HN, Mitra M, Bosompra O, Corney DC, Johnson EL, Rashed N, Ho LD, Coller HA. PMID: 29874120; PMCID: PMC6085827.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    33. MYC sets a tumour-stroma metabolic loop. Nat Cell Biol. 2018 05; 20(5):506-507. Coller HA. PMID: 29662180; PMCID: PMC8240172.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    34. DNA replication licensing in stem cells: Gatekeeping the commitment to proliferation. J Cell Biol. 2018 05 07; 217(5):1563-1565. Coller HA. PMID: 29653996; PMCID: PMC5940315.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    35. Determining Genome-wide Transcript Decay Rates in Proliferating and Quiescent Human Fibroblasts. J Vis Exp. 2018 01 02; (131). Mitra M, Lee HN, Coller HA. PMID: 29364236; PMCID: PMC5908404.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    36. An In Vitro Model of Cellular Quiescence in Primary Human Dermal Fibroblasts. Methods Mol Biol. 2018; 1686:27-47. Mitra M, Ho LD, Coller HA. PMID: 29030810; PMCID: PMC5718883.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    37. Lactate dehydrogenase activity drives hair follicle stem cell activation. Nat Cell Biol. 2017 Sep; 19(9):1017-1026. Flores A, Schell J, Krall AS, Jelinek D, Miranda M, Grigorian M, Braas D, White AC, Zhou JL, Graham NA, Graeber T, Seth P, Evseenko D, Coller HA, Rutter J, Christofk HR, Lowry WE. PMID: 28812580; PMCID: PMC5657543.
      View in: PubMed   Mentions: 106     Fields:    Translation:AnimalsCells
    38. Symposium on single cell analysis and genomic approaches, Experimental Biology 2017 Chicago, Illinois, April 23, 2017. Physiol Genomics. 2017 Sep 01; 49(9):491-495. Coller HA. PMID: 28802263; PMCID: PMC5625270.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    39. Cell cycle, cell division, and cell death. Mol Biol Cell. 2017 03 15; 28(6):693-694. Coller HA, Desai A. PMID: 28292908; PMCID: PMC5349770.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    40. Widespread changes in mRNA stability contribute to quiescence-specific gene expression patterns in a fibroblast model of quiescence. BMC Genomics. 2017 02 01; 18(1):123. Johnson EL, Robinson DG, Coller HA. PMID: 28143407; PMCID: PMC5286691.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    41. RNAs that make a heart beat. Ann Transl Med. 2016 Dec; 4(23):469. Mitra M, Coller HA. PMID: 28090525; PMCID: PMC5220037.
      View in: PubMed   Mentions: 3  
    42. Reactive oxygen species and bacterial biofilms in diabetic wound healing. Physiol Genomics. 2016 12 01; 48(12):889-896. Nouvong A, Ambrus AM, Zhang ER, Hultman L, Coller HA. PMID: 27764766; PMCID: PMC5206388.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimals
    43. Partners in the Warburg effect. Elife. 2016 04 13; 5:e15938. Rabinowitz JD, Coller HA. PMID: 27073176; PMCID: PMC4841767.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    44. Alternative polyadenylation can regulate post-translational membrane localization. Trends Cell Mol Biol. 2015; 10:37-47. Mitra M, Johnson EL, Coller HA. PMID: 26937127; PMCID: PMC4771188.
      View in: PubMed   Mentions: 6  
    45. The Runt-related transcription factor 1 in prostate cancer-associated fibroblasts. Proc Natl Acad Sci U S A. 2014 Nov 18; 111(46):16238-9. Coller HA. PMID: 25385588; PMCID: PMC4246277.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    46. On form and function: does chromatin packing regulate the cell cycle? Physiol Genomics. 2014 Mar 15; 46(6):191-4. Corney DC, Coller HA. PMID: 24474443; PMCID: PMC3949104.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    47. Is cancer a metabolic disease? Am J Pathol. 2014 Jan; 184(1):4-17. Coller HA. PMID: 24139946; PMCID: PMC3873478.
      View in: PubMed   Mentions: 93     Fields:    Translation:HumansAnimals
    48. H4K20 methylation regulates quiescence and chromatin compaction. Mol Biol Cell. 2013 Oct; 24(19):3025-37. Evertts AG, Manning AL, Wang X, Dyson NJ, Garcia BA, Coller HA. PMID: 23924899; PMCID: PMC3784377.
      View in: PubMed   Mentions: 74     Fields:    Translation:HumansCells
    49. Computational assessment of the cooperativity between RNA binding proteins and MicroRNAs in Transcript Decay. PLoS Comput Biol. 2013; 9(5):e1003075. Jiang P, Singh M, Coller HA. PMID: 23737738; PMCID: PMC3667768.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    50. Introducing the systems biology of cell state regulation section of Physiological Genomics. Physiol Genomics. 2013 Jun 03; 45(11):407-8. Coller HA, Systems Biology of Cell State Regulation Editorial Board. PMID: 23632415.
      View in: PubMed   Mentions:    Fields:    
    51. Quantitative dynamics of the link between cellular metabolism and histone acetylation. J Biol Chem. 2013 Apr 26; 288(17):12142-51. Evertts AG, Zee BM, Dimaggio PA, Gonzales-Cope M, Coller HA, Garcia BA. PMID: 23482559; PMCID: PMC3636898.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansCells
    52. A microRNA network regulates proliferative timing and extracellular matrix synthesis during cellular quiescence in fibroblasts. Genome Biol. 2012 Dec 22; 13(12):R121. Suh EJ, Remillard MY, Legesse-Miller A, Johnson EL, Lemons JM, Chapman TR, Forman JJ, Kojima M, Silberman ES, Coller HA. PMID: 23259597; PMCID: PMC3924601.
      View in: PubMed   Mentions: 39     Fields:    Translation:HumansCells
    53. Back to the origin: reconsidering replication, transcription, epigenetics, and cell cycle control. Genes Cancer. 2012 Nov; 3(11-12):678-96. Evertts AG, Coller HA. PMID: 23634256; PMCID: PMC3636748.
      View in: PubMed   Mentions: 10  
    54. Quiescent fibroblasts are protected from proteasome inhibition-mediated toxicity. Mol Biol Cell. 2012 Sep; 23(18):3566-81. Legesse-Miller A, Raitman I, Haley EM, Liao A, Sun LL, Wang DJ, Krishnan N, Lemons JM, Suh EJ, Johnson EL, Lund BA, Coller HA. PMID: 22875985; PMCID: PMC3442405.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    55. Staying alive: metabolic adaptations to quiescence. Cell Cycle. 2012 May 01; 11(9):1680-96. Valcourt JR, Lemons JM, Haley EM, Kojima M, Demuren OO, Coller HA. PMID: 22510571; PMCID: PMC3372394.
      View in: PubMed   Mentions: 118     Fields:    Translation:HumansAnimalsCells
    56. Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy. 2012 Apr; 8(4):445-544. Klionsky DJ, Abdalla FC, Abeliovich H, Abraham RT, Acevedo-Arozena A, Adeli K, Agholme L, Agnello M, Agostinis P, Aguirre-Ghiso JA, Ahn HJ, Ait-Mohamed O, Ait-Si-Ali S, Akematsu T, Akira S, Al-Younes HM, Al-Zeer MA, Albert ML, Albin RL, Alegre-Abarrategui J, Aleo MF, Alirezaei M, Almasan A, Almonte-Becerril M, Amano A, Amaravadi R, Amarnath S, Amer AO, Andrieu-Abadie N, Anantharam V, Ann DK, Anoopkumar-Dukie S, Aoki H, Apostolova N, Arancia G, Aris JP, Asanuma K, Asare NY, Ashida H, Askanas V, Askew DS, Auberger P, Baba M, Backues SK, Baehrecke EH, Bahr BA, Bai XY, Bailly Y, Baiocchi R, Baldini G, Balduini W, Ballabio A, Bamber BA, Bampton ET, Bánhegyi G, Bartholomew CR, Bassham DC, Bast RC, Batoko H, Bay BH, Beau I, Béchet DM, Begley TJ, Behl C, Behrends C, Bekri S, Bellaire B, Bendall LJ, Benetti L, Berliocchi L, Bernardi H, Bernassola F, Besteiro S, Bhatia-Kissova I, Bi X, Biard-Piechaczyk M, Blum JS, Boise LH, Bonaldo P, Boone DL, Bornhauser BC, Bortoluci KR, Bossis I, Bost F, Bourquin JP, Boya P, Boyer-Guittaut M, Bozhkov PV, Brady NR, Brancolini C, Brech A, Brenman JE, Brennand A, Bresnick EH, Brest P, Bridges D, Bristol ML, Brookes PS, Brown EJ, Brumell JH, Brunetti-Pierri N, Brunk UT, Bulman DE, Bultman SJ, Bultynck G, Burbulla LF, Bursch W, Butchar JP, Buzgariu W, Bydlowski SP, Cadwell K, Cahová M, Cai D, Cai J, Cai Q, Calabretta B, Calvo-Garrido J, Camougrand N, Campanella M, Campos-Salinas J, Candi E, Cao L, Caplan AB, Carding SR, Cardoso SM, Carew JS, Carlin CR, Carmignac V, Carneiro LA, Carra S, Caruso RA, Casari G, Casas C, Castino R, Cebollero E, Cecconi F, Celli J, Chaachouay H, Chae HJ, Chai CY, Chan DC, Chan EY, Chang RC, Che CM, Chen CC, Chen GC, Chen GQ, Chen M, Chen Q, Chen SS, Chen W, Chen X, Chen X, Chen X, Chen YG, Chen Y, Chen Y, Chen YJ, Chen Z, Cheng A, Cheng CH, Cheng Y, Cheong H, Cheong JH, Cherry S, Chess-Williams R, Cheung ZH, Chevet E, Chiang HL, Chiarelli R, Chiba T, Chin LS, Chiou SH, Chisari FV, Cho CH, Cho DH, Choi AM, Choi D, Choi KS, Choi ME, Chouaib S, Choubey D, Choubey V, Chu CT, Chuang TH, Chueh SH, Chun T, Chwae YJ, Chye ML, Ciarcia R, Ciriolo MR, Clague MJ, Clark RS, Clarke PG, Clarke R, Codogno P, Coller HA, Colombo MI, Comincini S, Condello M, Condorelli F, Cookson MR, Coombs GH, Coppens I, Corbalan R, Cossart P, Costelli P, Costes S, Coto-Montes A, Couve E, Coxon FP, Cregg JM, Crespo JL, Cronjé MJ, Cuervo AM, Cullen JJ, Czaja MJ, D'Amelio M, Darfeuille-Michaud A, Davids LM, Davies FE, De Felici M, de Groot JF, de Haan CA, De Martino L, De Milito A, De Tata V, Debnath J, Degterev A, Dehay B, Delbridge LM, Demarchi F, Deng YZ, Dengjel J, Dent P, Denton D, Deretic V, Desai SD, Devenish RJ, Di Gioacchino M, Di Paolo G, Di Pietro C, Díaz-Araya G, Díaz-Laviada I, Diaz-Meco MT, Diaz-Nido J, Dikic I, Dinesh-Kumar SP, Ding WX, Distelhorst CW, Diwan A, Djavaheri-Mergny M, Dokudovskaya S, Dong Z, Dorsey FC, Dosenko V, Dowling JJ, Doxsey S, Dreux M, Drew ME, Duan Q, Duchosal MA, Duff K, Dugail I, Durbeej M, Duszenko M, Edelstein CL, Edinger AL, Egea G, Eichinger L, Eissa NT, Ekmekcioglu S, El-Deiry WS, Elazar Z, Elgendy M, Ellerby LM, Eng KE, Engelbrecht AM, Engelender S, Erenpreisa J, Escalante R, Esclatine A, Eskelinen EL, Espert L, Espina V, Fan H, Fan J, Fan QW, Fan Z, Fang S, Fang Y, Fanto M, Fanzani A, Farkas T, Farré JC, Faure M, Fechheimer M, Feng CG, Feng J, Feng Q, Feng Y, Fésüs L, Feuer R, Figueiredo-Pereira ME, Fimia GM, Fingar DC, Finkbeiner S, Finkel T, Finley KD, Fiorito F, Fisher EA, Fisher PB, Flajolet M, Florez-McClure ML, Florio S, Fon EA, Fornai F, Fortunato F, Fotedar R, Fowler DH, Fox HS, Franco R, Frankel LB, Fransen M, Fuentes JM, Fueyo J, Fujii J, Fujisaki K, Fujita E, Fukuda M, Furukawa RH, Gaestel M, Gailly P, Gajewska M, Galliot B, Galy V, Ganesh S, Ganetzky B, Ganley IG, et al. PMID: 22966490; PMCID: PMC3404883.
      View in: PubMed   Mentions: 1815     Fields:    Translation:HumansAnimals
    57. A step toward systems metabolomics. Physiol Genomics. 2012 Apr 02; 44(7):383-5. Ventura-Clapier R, Coller HA. PMID: 22337904; PMCID: PMC3339853.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    58. Regulation of the let-7a-3 promoter by NF-κB. PLoS One. 2012; 7(2):e31240. Wang DJ, Legesse-Miller A, Johnson EL, Coller HA. PMID: 22348059; PMCID: PMC3278432.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansAnimalsCells
    59. Integrative approaches for microarray data analysis. Methods Mol Biol. 2012; 802:157-82. Waldron L, Coller HA, Huttenhower C. PMID: 22130880.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    60. Functional interactions between microRNAs and RNA binding proteins. Microrna. 2012; 1(1):70-9. Jiang P, Coller H. PMID: 25048093; PMCID: PMC5123774.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansAnimalsCells
    61. Cell biology. The essence of quiescence. Science. 2011 Nov 25; 334(6059):1074-5. Coller HA. PMID: 22116874; PMCID: PMC4765170.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansAnimals
    62. Activated Ras requires autophagy to maintain oxidative metabolism and tumorigenesis. Genes Dev. 2011 Mar 01; 25(5):460-70. Guo JY, Chen HY, Mathew R, Fan J, Strohecker AM, Karsli-Uzunbas G, Kamphorst JJ, Chen G, Lemons JM, Karantza V, Coller HA, Dipaola RS, Gelinas C, Rabinowitz JD, White E. PMID: 21317241; PMCID: PMC3049287.
      View in: PubMed   Mentions: 710     Fields:    Translation:HumansAnimalsCells
    63. The hexosamine biosynthetic pathway couples growth factor-induced glutamine uptake to glucose metabolism. Genes Dev. 2010 Dec 15; 24(24):2784-99. Wellen KE, Lu C, Mancuso A, Lemons JM, Ryczko M, Dennis JW, Rabinowitz JD, Coller HA, Thompson CB. PMID: 21106670; PMCID: PMC3003197.
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    64. Quiescent fibroblasts exhibit high metabolic activity. PLoS Biol. 2010 Oct 19; 8(10):e1000514. Lemons JM, Feng XJ, Bennett BD, Legesse-Miller A, Johnson EL, Raitman I, Pollina EA, Rabitz HA, Rabinowitz JD, Coller HA. PMID: 21049082; PMCID: PMC2958657.
      View in: PubMed   Mentions: 203     Fields:    Translation:HumansAnimalsCells
    65. The code within the code: microRNAs target coding regions. Cell Cycle. 2010 Apr 15; 9(8):1533-41. Forman JJ, Coller HA. PMID: 20372064; PMCID: PMC2936675.
      View in: PubMed   Mentions: 84     Fields:    Translation:Cells
    66. The common feature of leukemia-associated IDH1 and IDH2 mutations is a neomorphic enzyme activity converting alpha-ketoglutarate to 2-hydroxyglutarate. Cancer Cell. 2010 Mar 16; 17(3):225-34. Ward PS, Patel J, Wise DR, Abdel-Wahab O, Bennett BD, Coller HA, Cross JR, Fantin VR, Hedvat CV, Perl AE, Rabinowitz JD, Carroll M, Su SM, Sharp KA, Levine RL, Thompson CB. PMID: 20171147; PMCID: PMC2849316.
      View in: PubMed   Mentions: 958     Fields:    Translation:HumansCells
    67. Hijacking HES1: how tumors co-opt the anti-differentiation strategies of quiescent cells. Trends Mol Med. 2010 Jan; 16(1):17-26. Sang L, Roberts JM, Coller HA. PMID: 20022559; PMCID: PMC2864914.
      View in: PubMed   Mentions: 51     Fields:    Translation:HumansAnimalsCells
    68. Detailing regulatory networks through large scale data integration. Bioinformatics. 2009 Dec 15; 25(24):3267-74. Huttenhower C, Mutungu KT, Indik N, Yang W, Schroeder M, Forman JJ, Troyanskaya OG, Coller HA. PMID: 19825796; PMCID: PMC2788929.
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    69. Fear of commitment: Hes1 protects quiescent fibroblasts from irreversible cellular fates. Cell Cycle. 2009 Jul 15; 8(14):2161-7. Sang L, Coller HA. PMID: 19587546.
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    70. Exploring the human genome with functional maps. Genome Res. 2009 Jun; 19(6):1093-106. Huttenhower C, Haley EM, Hibbs MA, Dumeaux V, Barrett DR, Coller HA, Troyanskaya OG. PMID: 19246570; PMCID: PMC2694471.
      View in: PubMed   Mentions: 116     Fields:    Translation:HumansCells
    71. let-7 Overexpression leads to an increased fraction of cells in G2/M, direct down-regulation of Cdc34, and stabilization of Wee1 kinase in primary fibroblasts. J Biol Chem. 2009 Mar 13; 284(11):6605-9. Legesse-Miller A, Elemento O, Pfau SJ, Forman JJ, Tavazoie S, Coller HA. PMID: 19126550; PMCID: PMC2652271.
      View in: PubMed   Mentions: 67     Fields:    Translation:HumansCells
    72. Genetics. It's the sequence, stupid! Science. 2008 Oct 17; 322(5900):380-1. Coller HA, Kruglyak L. PMID: 18927376; PMCID: PMC4765165.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    73. A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence. Proc Natl Acad Sci U S A. 2008 Sep 30; 105(39):14879-84. Forman JJ, Legesse-Miller A, Coller HA. PMID: 18812516; PMCID: PMC2567461.
      View in: PubMed   Mentions: 318     Fields:    Translation:HumansAnimalsCells
    74. Fetal-juvenile origins of point mutations in the adult human tracheal-bronchial epithelium: absence of detectable effects of age, gender or smoking status. Mutat Res. 2008 Nov 10; 646(1-2):25-40. Sudo H, Li-Sucholeiki XC, Marcelino LA, Gruhl AN, Herrero-Jimenez P, Zarbl H, Willey JC, Furth EE, Morgenthaler S, Coller HA, Ekstrom PO, Kurzweil R, Gostjeva EV, Thilly WG. PMID: 18824180.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    75. Control of the reversibility of cellular quiescence by the transcriptional repressor HES1. Science. 2008 Aug 22; 321(5892):1095-100. Sang L, Coller HA, Roberts JM. PMID: 18719287; PMCID: PMC2721335.
      View in: PubMed   Mentions: 147     Fields:    Translation:HumansCells
    76. Regulating the angiogenic balance in tissues. Cell Cycle. 2008 Jul 01; 7(13):2056-70. Pollina EA, Legesse-Miller A, Haley EM, Goodpaster T, Randolph-Habecker J, Coller HA. PMID: 18642446; PMCID: PMC3121332.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansCells
    77. An immunohistochemical method for identifying fibroblasts in formalin-fixed, paraffin-embedded tissue. J Histochem Cytochem. 2008 Apr; 56(4):347-58. Goodpaster T, Legesse-Miller A, Hameed MR, Aisner SC, Randolph-Habecker J, Coller HA. PMID: 18071065; PMCID: PMC2326106.
      View in: PubMed   Mentions: 57     Fields:    Translation:HumansCells
    78. What's taking so long? S-phase entry from quiescence versus proliferation. Nat Rev Mol Cell Biol. 2007 Aug; 8(8):667-70. Coller HA. PMID: 17637736.
      View in: PubMed   Mentions: 54     Fields:    Translation:HumansAnimalsCells
    79. "Myc'ed messages": myc induces transcription of E2F1 while inhibiting its translation via a microRNA polycistron. PLoS Genet. 2007 Aug; 3(8):e146. Coller HA, Forman JJ, Legesse-Miller A. PMID: 17784791; PMCID: PMC1959363.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansAnimalsCells
    80. Nearest Neighbor Networks: clustering expression data based on gene neighborhoods. BMC Bioinformatics. 2007 Jul 12; 8:250. Huttenhower C, Flamholz AI, Landis JN, Sahi S, Myers CL, Olszewski KL, Hibbs MA, Siemers NO, Troyanskaya OG, Coller HA. PMID: 17626636; PMCID: PMC1941745.
      View in: PubMed   Mentions: 24     Fields:    Translation:Animals
    81. Adenovirus type 5 exerts genome-wide control over cellular programs governing proliferation, quiescence, and survival. Genome Biol. 2007; 8(4):R58. Miller DL, Myers CL, Rickards B, Coller HA, Flint SJ. PMID: 17430596; PMCID: PMC1896011.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    82. Dynamics of the cellular metabolome during human cytomegalovirus infection. PLoS Pathog. 2006 Dec; 2(12):e132. Munger J, Bajad SU, Coller HA, Shenk T, Rabinowitz JD. PMID: 17173481; PMCID: PMC1698944.
      View in: PubMed   Mentions: 232     Fields:    Translation:HumansCells
    83. A new description of cellular quiescence. PLoS Biol. 2006 Mar; 4(3):e83. Coller HA, Sang L, Roberts JM. PMID: 16509772; PMCID: PMC1393757.
      View in: PubMed   Mentions: 255     Fields:    Translation:HumansCells
    84. Origins of human mitochondrial point mutations as DNA polymerase gamma-mediated errors. Mutat Res. 2006 Jul 25; 599(1-2):11-20. Zheng W, Khrapko K, Coller HA, Thilly WG, Copeland WC. PMID: 16490220.
      View in: PubMed   Mentions: 65     Fields:    Translation:HumansCells
    85. Clustering of mutant mitochondrial DNA copies suggests stem cells are common in human bronchial epithelium. Mutat Res. 2005 Oct 15; 578(1-2):256-71. Coller HA, Khrapko K, Herrero-Jimenez P, Vatland JA, Li-Sucholeiki XC, Thilly WG. PMID: 16009384.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    86. Telomerase modulates expression of growth-controlling genes and enhances cell proliferation. Nat Cell Biol. 2003 May; 5(5):474-9. Smith LL, Coller HA, Roberts JM. PMID: 12717449.
      View in: PubMed   Mentions: 162     Fields:    Translation:HumansCells
    87. Chemosensitivity prediction by transcriptional profiling. Proc Natl Acad Sci U S A. 2001 Sep 11; 98(19):10787-92. Staunton JE, Slonim DK, Coller HA, Tamayo P, Angelo MJ, Park J, Scherf U, Lee JK, Reinhold WO, Weinstein JN, Mesirov JP, Lander ES, Golub TR. PMID: 11553813; PMCID: PMC58553.
      View in: PubMed   Mentions: 192     Fields:    Translation:HumansCells
    88. High resolution analysis of point mutations by constant denaturant capillary electrophoresis (CDCE). Methods Mol Biol. 2001; 163:57-72. Khrapko K, Coller HA, Li-Sucholeiki XC, André PC, Thilly WG. PMID: 11242964.
      View in: PubMed   Mentions: 4     Fields:    
    89. Expression analysis with oligonucleotide microarrays reveals that MYC regulates genes involved in growth, cell cycle, signaling, and adhesion. Proc Natl Acad Sci U S A. 2000 Mar 28; 97(7):3260-5. Coller HA, Grandori C, Tamayo P, Colbert T, Lander ES, Eisenman RN, Golub TR. PMID: 10737792; PMCID: PMC16226.
      View in: PubMed   Mentions: 277     Fields:    Translation:HumansCells
    90. Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science. 1999 Oct 15; 286(5439):531-7. Golub TR, Slonim DK, Tamayo P, Huard C, Gaasenbeek M, Mesirov JP, Coller H, Loh ML, Downing JR, Caligiuri MA, Bloomfield CD, Lander ES. PMID: 10521349.
      View in: PubMed   Mentions: 1983     Fields:    Translation:Humans
    91. Cell-by-cell scanning of whole mitochondrial genomes in aged human heart reveals a significant fraction of myocytes with clonally expanded deletions. Nucleic Acids Res. 1999 Jun 01; 27(11):2434-41. Khrapko K, Bodyak N, Thilly WG, van Orsouw NJ, Zhang X, Coller HA, Perls TT, Upton M, Vijg J, Wei JY. PMID: 10325435; PMCID: PMC148812.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansCells
    92. Identification of point mutations in mixtures by capillary electrophoresis hybridization. Nucleic Acids Res. 1998 Dec 15; 26(24):5738-40. Khrapko K, Coller HA, Hanekamp JS, Thilly WG. PMID: 9838007; PMCID: PMC148045.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    93. Chemically induced mutations in mitochondrial DNA of human cells: mutational spectrum of N-methyl-N'-nitro-N-nitrosoguanidine. Cancer Res. 1998 Jul 01; 58(13):2857-62. Marcelino LA, André PC, Khrapko K, Coller HA, Griffith J, Thilly WG. PMID: 9661902.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    94. Mutational spectra of a 100-base pair mitochondrial DNA target sequence in bronchial epithelial cells: a comparison of smoking and nonsmoking twins. Cancer Res. 1998 Mar 15; 58(6):1268-77. Coller HA, Khrapko K, Torres A, Frampton MW, Utell MJ, Thilly WG. PMID: 9515815.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    95. Mitochondrial mutational spectra in human cells and tissues. Proc Natl Acad Sci U S A. 1997 Dec 09; 94(25):13798-803. Khrapko K, Coller HA, André PC, Li XC, Hanekamp JS, Thilly WG. PMID: 9391107; PMCID: PMC28387.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansCells
    96. Mutational spectrometry without phenotypic selection: human mitochondrial DNA. Nucleic Acids Res. 1997 Feb 15; 25(4):685-93. Khrapko K, Coller H, André P, Li XC, Foret F, Belenky A, Karger BL, Thilly WG. PMID: 9016616; PMCID: PMC146488.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    97. Efficiency of separation of DNA mutations by constant denaturant capillary electrophoresis is controlled by the kinetics of DNA melting equilibrium. Electrophoresis. 1996 Dec; 17(12):1867-74. Khrapko K, Coller H, Thilly W. PMID: 9034768.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    98. Poisson statistical analysis of repetitive subcloning by the limiting dilution technique as a way of assessing hybridoma monoclonality. Methods Enzymol. 1986; 121:412-7. Coller HA, Coller BS. PMID: 3724479.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    99. Statistical analysis of repetitive subcloning by the limiting dilution technique with a view toward ensuring hybridoma monoclonality. Hybridoma. 1983; 2(1):91-6. Coller HA, Coller BS. PMID: 6381288.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
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