Thomas M Vondriska

Title(s)Professor, Anesthesiology
Professor, Medicine
Professor, Physiology
SchoolMedicine
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Epigenomic basis of resilience to heart failure
NIH R21HL150667Feb 1, 2020 - Jan 31, 2022
Role: Principal Investigator
Small molecule therapies targeting chromatin architecture in heart failure
NIH R01HL150225Dec 15, 2019 - Nov 30, 2023
Role: Principal Investigator
Novel Mechanisms of LncRNA Mediated Epigenetic Regulation in Cardiac Hypertrophy
NIH R01HL143058Jul 1, 2018 - Jun 30, 2022
Role: Principal Investigator
Epigenomic Mechanisms of Heart Failure
NIH R01HL129639Aug 4, 2015 - May 31, 2020
Role: Principal Investigator
Systems Analysis of Cardiac Chromatin Structure
NIH R01HL115238Jul 24, 2012 - Jun 30, 2018
Role: Principal Investigator
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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Rapid onset fibrotic remodeling and ventricular dysfunction induced by phenylephrine involve targeted reprogramming of myocyte and fibroblast transcriptomes. bioRxiv. 2024 Oct 15. Kimball TH, Gromova T, Gehred ND, Chapski DJ, Wang K, Vaseghi M, Fischer MA, Lefer DJ, Vondriska TM. PMID: 39464022; PMCID: PMC11507669.
    View in: PubMed   Mentions:
  2. "Circulating Inflammation" and the Plasma Proteome in Heart Failure With Preserved Ejection Fraction. JACC Basic Transl Sci. 2024 Sep; 9(9):1085-1087. Vondriska TM, Lefer DJ. PMID: 39444925; PMCID: PMC11494386.
    View in: PubMed   Mentions:
  3. Novel Insights into Post-Myocardial Infarction Cardiac Remodeling through Algorithmic Detection of Cell-Type Composition Shifts. bioRxiv. 2024 Aug 10. Gural B, Kirkland L, Hockett A, Sandroni P, Zhang J, Rosa-Garrido M, Swift SK, Chapski D, Flinn MA, O'Meara CC, Vondriska TM, Patterson M, Jensen BC, Rau CD. PMID: 39149394; PMCID: PMC11326268.
    View in: PubMed   Mentions:
  4. Novel Insights into Post-Myocardial Infarction Cardiac Remodeling through Algorithmic Detection of Cell-Type Composition Shifts. bioRxiv. 2024 Aug 10. Gural B, Kirkland L, Hockett A, Sandroni P, Zhang J, Rosa-Garrido M, Swift SK, Chapski D, Flinn MA, O'Meara CC, Vondriska TM, Patterson M, Jensen BC, Rau CD. PMID: 39149394; PMCID: PMC11326268.
    View in: PubMed   Mentions:
  5. Nuclear ATP-citrate lyase regulates chromatin-dependent activation and maintenance of the myofibroblast gene program. Nat Cardiovasc Res. 2024 Jul; 3(7):869-882. Lazaropoulos MP, Gibb AA, Chapski DJ, Nair AA, Reiter AN, Roy R, Eaton DM, Bedi KC, Margulies KB, Wellen KE, Estarás C, Vondriska TM, Elrod JW. PMID: 39196175; PMCID: PMC11358007.
    View in: PubMed   Mentions: 1  Translation:AnimalsCells
  6. Nuclear ATP-citrate lyase regulates chromatin-dependent activation and maintenance of the myofibroblast gene program. Nat Cardiovasc Res. 2024 Jul; 3(7):869-882. Lazaropoulos MP, Gibb AA, Chapski DJ, Nair AA, Reiter AN, Roy R, Eaton DM, Bedi KC, Margulies KB, Wellen KE, Estarás C, Vondriska TM, Elrod JW. PMID: 39196175; PMCID: PMC11358007.
    View in: PubMed   Mentions: 1  Translation:AnimalsCells
  7. Decreased Left Atrial Cardiomyocyte Fibroblast Growth Factor 13 Expression Increases Vulnerability to Postoperative Atrial Fibrillation in Humans. J Am Heart Assoc. 2024 Jun 18; 13(12):e034896. Fischer MA, Arrieta A, Angelini M, Soehalim E, Chapski DJ, Shemin RJ, Vondriska TM, Olcese R. PMID: 38860408; PMCID: PMC11255725.
    View in: PubMed   Mentions:    Fields:    Translation:HumansCells
  8. Circadian control of histone turnover during cardiac development and growth. J Biol Chem. 2024 Jul; 300(7):107434. Arrieta A, Chapski DJ, Reese A, Kimball TH, Song K, Rosa-Garrido M, Vondriska TM. PMID: 38830405; PMCID: PMC11261805.
    View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
  9. Histone H1.0 couples cellular mechanical behaviors to chromatin structure. Nat Cardiovasc Res. 2024; 3(4):441-459. Hu S, Chapski DJ, Gehred ND, Kimball TH, Gromova T, Flores A, Rowat AC, Chen J, Packard RRS, Olszewski E, Davis J, Rau CD, McKinsey TA, Rosa-Garrido M, Vondriska TM. PMID: 38765203; PMCID: PMC11101354.
    View in: PubMed   Mentions: 2  
  10. Decreased Left Atrial Cardiomyocyte FGF13 Expression Increases Vulnerability to Postoperative Atrial Fibrillation in Humans. bioRxiv. 2024 Jan 31. Fischer MA, Arrieta A, Angelini M, Soehalim E, Chapski DJ, Shemin RJ, Vondriska TM, Olcese R. PMID: 38352455; PMCID: PMC10862764.
    View in: PubMed   Mentions:
  11. Circadian Control of Histone Turnover During Cardiac Development and Growth. bioRxiv. 2023 Nov 14. Arrieta A, Chapski DJ, Reese A, Kimball T, Song K, Rosa-Garrido M, Vondriska TM. PMID: 38014083; PMCID: PMC10680691.
    View in: PubMed   Mentions:
  12. Integrative transcriptomics and cell systems analyses reveal protective pathways controlled by Igfbp-3 in anthracycline-induced cardiotoxicity. FASEB J. 2023 06; 37(6):e22977. Chen J, Chapski DJ, Jong J, Awada J, Wang Y, Slamon DJ, Vondriska TM, Packard RRS. PMID: 37219486; PMCID: PMC10286824.
    View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
  13. Rtf1 Transcriptionally Regulates Neonatal and Adult Cardiomyocyte Biology. J Cardiovasc Dev Dis. 2023 May 20; 10(5). Langenbacher AD, Lu F, Crisman L, Huang ZYS, Chapski DJ, Vondriska TM, Wang Y, Gao C, Chen JN. PMID: 37233188; PMCID: PMC10219292.
    View in: PubMed   Mentions: 1  
  14. Single-cell transcriptomes in the heart: when every epigenome counts. Cardiovasc Res. 2023 03 17; 119(1):64-78. Gromova T, Gehred ND, Vondriska TM. PMID: 35325060; PMCID: PMC10233279.
    View in: PubMed   Mentions: 1     Fields:    Translation:Cells
  15. Unwind to the beat: chromatin and cardiac conduction. J Clin Invest. 2023 02 01; 133(3). Chapski DJ, Vondriska TM. PMID: 36719369; PMCID: PMC9888370.
    View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
  16. Longitudinal profiling in patients undergoing cardiac surgery reveals postoperative changes in DNA methylation. Clin Epigenetics. 2022 12 30; 14(1):195. Fischer MA, Chapski DJ, Soehalim E, Montoya DJ, Grogan T, Pellegrini M, Cai H, Shemin RJ, Vondriska TM. PMID: 36585726; PMCID: PMC9805211.
    View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
  17. Nucleosome proteostasis and histone turnover. Front Mol Biosci. 2022; 9:990006. Arrieta A, Vondriska TM. PMID: 36250018; PMCID: PMC9563994.
    View in: PubMed   Mentions: 1  
  18. genomeSidekick: A user-friendly epigenomics data analysis tool. Front Bioinform. 2022; 2:831025. Chen J, Zhu AJ, Packard RRS, Vondriska TM, Chapski DJ. PMID: 36304311; PMCID: PMC9580848.
    View in: PubMed   Mentions: 1  
  19. Laparoscopic Sleeve Gastrectomy in Patients with Severe Obesity Restores Adaptive Responses Leading to Nonalcoholic Steatohepatitis. Int J Mol Sci. 2022 Jul 15; 23(14). Cabré N, Luciano-Mateo F, Chapski DJ, Baiges-Gaya G, Fernández-Arroyo S, Hernández-Aguilera A, Castañé H, Rodríguez-Tomàs E, París M, Sabench F, Castillo DD, Del Bas JM, Tomé M, Bodineau C, Sola-García A, López-Miranda J, Martín-Montalvo A, Durán RV, Vondriska TM, Rosa-Garrido M, Camps J, Menéndez JA, Joven J. PMID: 35887177; PMCID: PMC9320342.
    View in: PubMed   Mentions: 3     Fields:    Translation:Humans
  20. Sex differences in heart mitochondria regulate diastolic dysfunction. Nat Commun. 2022 07 04; 13(1):3850. Cao Y, Vergnes L, Wang YC, Pan C, Chella Krishnan K, Moore TM, Rosa-Garrido M, Kimball TH, Zhou Z, Charugundla S, Rau CD, Seldin MM, Wang J, Wang Y, Vondriska TM, Reue K, Lusis AJ. PMID: 35787630; PMCID: PMC9253085.
    View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
  21. DNA Methylation-Based Prediction of Post-operative Atrial Fibrillation. Front Cardiovasc Med. 2022; 9:837725. Fischer MA, Mahajan A, Cabaj M, Kimball TH, Morselli M, Soehalim E, Chapski DJ, Montoya D, Farrell CP, Scovotti J, Bueno CT, Mimila NA, Shemin RJ, Elashoff D, Pellegrini M, Monte E, Vondriska TM. PMID: 35620521; PMCID: PMC9127230.
    View in: PubMed   Mentions: 7  
  22. How Chromatin Stiffens Fibroblasts. Curr Opin Physiol. 2022 Apr; 26. Hu S, Vondriska TM. PMID: 35979086; PMCID: PMC9380867.
    View in: PubMed   Mentions: 1  
  23. The anti-aging protein Klotho affects early postnatal myogenesis by downregulating Jmjd3 and the canonical Wnt pathway. FASEB J. 2022 03; 36(3):e22192. McKee CM, Chapski DJ, Wehling-Henricks M, Rosa-Garrido M, Kuro-O M, Vondriska TM, Tidball JG. PMID: 35174906; PMCID: PMC9007106.
    View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
  24. Transcriptional, Electrophysiological, and Metabolic Characterizations of hESC-Derived First and Second Heart Fields Demonstrate a Potential Role of TBX5 in Cardiomyocyte Maturation. Front Cell Dev Biol. 2021; 9:787684. Pezhouman A, Nguyen NB, Sercel AJ, Nguyen TL, Daraei A, Sabri S, Chapski DJ, Zheng M, Patananan AN, Ernst J, Plath K, Vondriska TM, Teitell MA, Ardehali R. PMID: 34988079; PMCID: PMC8722677.
    View in: PubMed   Mentions: 3  
  25. Early adaptive chromatin remodeling events precede pathologic phenotypes and are reinforced in the failing heart. J Mol Cell Cardiol. 2021 11; 160:73-86. Chapski DJ, Cabaj M, Morselli M, Mason RJ, Soehalim E, Ren S, Pellegrini M, Wang Y, Vondriska TM, Rosa-Garrido M. PMID: 34273410; PMCID: PMC9181638.
    View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
  26. Glutaminolysis-induced mTORC1 activation drives non-alcoholic steatohepatitis progression. J Hepatol. 2021 May 04. Cabré N, Luciano-Mateo F, Chapski DJ, Baiges-Gaya G, Fernández-Arroyo S, Hernández-Aguilera A, Castañé H, Rodríguez-Tomàs E, París M, Sabench F, Del Castillo D, Del Bas JM, Tomé M, Bodineau C, Sola-García A, López-Miranda J, Martín-Montalvo A, Durán RV, Vondriska TM, Rosa-Garrido M, Camps J, Menéndez JA, Joven J. PMID: 33961941.
    View in: PubMed   Mentions: 3     Fields:    
  27. Taking Data Science to Heart: Next Scale of Gene Regulation. Curr Cardiol Rep. 2021 03 15; 23(5):46. Chapski DJ, Vondriska TM. PMID: 33721129; PMCID: PMC8142693.
    View in: PubMed   Mentions: 1     Fields:    Translation:Humans
  28. Clinical epigenomics for cardiovascular disease: Diagnostics and therapies. J Mol Cell Cardiol. 2021 05; 154:97-105. Fischer MA, Vondriska TM. PMID: 33561434; PMCID: PMC8330446.
    View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
  29. Metabolism, Epigenetics, and Causal Inference in Heart Failure. Trends Endocrinol Metab. 2020 03; 31(3):181-191. Kimball TH, Vondriska TM. PMID: 31866216; PMCID: PMC7035178.
    View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimals
  30. Dissecting Chromatin Architecture for Novel Cardiovascular Disease Targets. Circulation. 2019 08 06; 140(6):446-448. Foo RS, Anene-Nzelu CG, Rosa-Garrido M, Vondriska TM. PMID: 31381426; PMCID: PMC6989048.
    View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
  31. Chromatin Is the Same in a Relative Way (But You're Older). Circ Res. 2019 07 05; 125(2):209-211. Mason RJ, Vondriska TM. PMID: 31268855; PMCID: PMC6652215.
    View in: PubMed   Mentions: 2     Fields:    Translation:Cells
  32. Direct visualization of cardiac transcription factories reveals regulatory principles of nuclear architecture during pathological remodeling. J Mol Cell Cardiol. 2019 03; 128:198-211. Karbassi E, Rosa-Garrido M, Chapski DJ, Wu Y, Ren S, Wang Y, Stefani E, Vondriska TM. PMID: 30742811; PMCID: PMC6644685.
    View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
  33. Spatial Principles of Chromatin Architecture Associated With Organ-Specific Gene Regulation. Front Cardiovasc Med. 2018; 5:186. Chapski DJ, Rosa-Garrido M, Hua N, Alber F, Vondriska TM. PMID: 30697540; PMCID: PMC6341059.
    View in: PubMed   Mentions: 12  
  34. Epigenomic regulation of heart failure: integrating histone marks, long noncoding RNAs, and chromatin architecture. F1000Res. 2018; 7. McKinsey TA, Vondriska TM, Wang Y. PMID: 30416708; PMCID: PMC6206605.
    View in: PubMed   Mentions: 16     Fields:    Translation:HumansAnimalsCells
  35. Epigenomes in Cardiovascular Disease. Circ Res. 2018 05 25; 122(11):1586-1607. Rosa-Garrido M, Chapski DJ, Vondriska TM. PMID: 29798902; PMCID: PMC5976233.
    View in: PubMed   Mentions: 39     Fields:    Translation:HumansCells
  36. DNA Methylation and Human Heart Failure: Mechanisms or Prognostics. Circulation. 2017 10 17; 136(16):1545-1547. Rau CD, Vondriska TM. PMID: 29038208; PMCID: PMC5683409.
    View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
  37. High-Resolution Mapping of Chromatin Conformation in Cardiac Myocytes Reveals Structural Remodeling of the Epigenome in Heart Failure. Circulation. 2017 Oct 24; 136(17):1613-1625. Rosa-Garrido M, Chapski DJ, Schmitt AD, Kimball TH, Karbassi E, Monte E, Balderas E, Pellegrini M, Shih TT, Soehalim E, Liem D, Ping P, Galjart NJ, Ren S, Wang Y, Ren B, Vondriska TM. PMID: 28802249; PMCID: PMC5648689.
    View in: PubMed   Mentions: 87     Fields:    Translation:AnimalsCells
  38. Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence. Neuron. 2017 Aug 02; 95(3):531-549.e9. Chai H, Diaz-Castro B, Shigetomi E, Monte E, Octeau JC, Yu X, Cohn W, Rajendran PS, Vondriska TM, Whitelegge JP, Coppola G, Khakh BS. PMID: 28712653; PMCID: PMC5811312.
    View in: PubMed   Mentions: 371     Fields:    Translation:AnimalsCells
  39. Epigenomic Disruption of Cardiovascular Care: What It Will Take. Circ Res. 2017 05 26; 120(11):1692-1693. Monte E, Fischer MA, Vondriska TM. PMID: 28546346; PMCID: PMC5527682.
    View in: PubMed   Mentions:    Fields:    Translation:HumansCells
  40. Operationalizing Precision Cardiovascular Medicine: Three Innovations. Circ Res. 2016 10 14; 119(9):984-987. Wang JJ, Aboulhosn JA, Hofer IS, Mahajan A, Wang Y, Vondriska TM. PMID: 27737942; PMCID: PMC5135087.
    View in: PubMed   Mentions: 3     Fields:    Translation:Humans
  41. The chromatin-binding protein Smyd1 restricts adult mammalian heart growth. Am J Physiol Heart Circ Physiol. 2016 11 01; 311(5):H1234-H1247. Franklin S, Kimball T, Rasmussen TL, Rosa-Garrido M, Chen H, Tran T, Miller MR, Gray R, Jiang S, Ren S, Wang Y, Tucker HO, Vondriska TM. PMID: 27663768; PMCID: PMC5130490.
    View in: PubMed   Mentions: 34     Fields:    Translation:HumansAnimalsCells
  42. Undiscovered Physiology of Transcript and Protein Networks. Compr Physiol. 2016 09 15; 6(4):1851-1872. Monte E, Rosa-Garrido M, Vondriska TM, Wang J. PMID: 27783861; PMCID: PMC10751805.
    View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
  43. The long noncoding RNA Chaer defines an epigenetic checkpoint in cardiac hypertrophy. Nat Med. 2016 10; 22(10):1131-1139. Wang Z, Zhang XJ, Ji YX, Zhang P, Deng KQ, Gong J, Ren S, Wang X, Chen I, Wang H, Gao C, Yokota T, Ang YS, Li S, Cass A, Vondriska TM, Li G, Deb A, Srivastava D, Yang HT, Xiao X, Li H, Wang Y. PMID: 27618650; PMCID: PMC5053883.
    View in: PubMed   Mentions: 205     Fields:    Translation:HumansAnimalsCells
  44. Relationship of disease-associated gene expression to cardiac phenotype is buffered by genetic diversity and chromatin regulation. Physiol Genomics. 2016 08 01; 48(8):601-15. Karbassi E, Monte E, Chapski DJ, Lopez R, Rosa Garrido M, Kim J, Wisniewski N, Rau CD, Wang JJ, Weiss JN, Wang Y, Lusis AJ, Vondriska TM. PMID: 27287924; PMCID: PMC5005461.
    View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
  45. Reciprocal Regulation of the Cardiac Epigenome by Chromatin Structural Proteins Hmgb and Ctcf: IMPLICATIONS FOR TRANSCRIPTIONAL REGULATION. J Biol Chem. 2016 07 22; 291(30):15428-46. Monte E, Rosa-Garrido M, Karbassi E, Chen H, Lopez R, Rau CD, Wang J, Nelson SF, Wu Y, Stefani E, Lusis AJ, Wang Y, Kurdistani SK, Franklin S, Vondriska TM. PMID: 27226577; PMCID: PMC4957031.
    View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
  46. DNA Methylation Indicates Susceptibility to Isoproterenol-Induced Cardiac Pathology and Is Associated With Chromatin States. Circ Res. 2016 Mar 04; 118(5):786-97. Chen H, Orozco LD, Wang J, Rau CD, Rubbi L, Ren S, Wang Y, Pellegrini M, Lusis AJ, Vondriska TM. PMID: 26838786; PMCID: PMC4779427.
    View in: PubMed   Mentions: 23     Fields:    Translation:AnimalsCells
  47. RBFox1-mediated RNA splicing regulates cardiac hypertrophy and heart failure. J Clin Invest. 2016 Jan; 126(1):195-206. Gao C, Ren S, Lee JH, Qiu J, Chapski DJ, Rau CD, Zhou Y, Abdellatif M, Nakano A, Vondriska TM, Xiao X, Fu XD, Chen JN, Wang Y. PMID: 26619120; PMCID: PMC4701548.
    View in: PubMed   Mentions: 81     Fields:    Translation:HumansAnimalsCells
  48. Not low hanging but still sweet: Metabolic proteomes in cardiovascular disease. J Mol Cell Cardiol. 2016 Jan; 90:70-3. Monte E, Lopez R, Vondriska TM. PMID: 26611885.
    View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
  49. Transcriptome and proteome dynamics in the cardiovascular system. J Physiol. 2015 Apr 15; 593(8):1773-5. Vondriska TM. PMID: 25871561; PMCID: PMC4405740.
    View in: PubMed   Mentions:    Fields:    Translation:HumansCells
  50. Mitochondrial Ca(2+) uptake by the voltage-dependent anion channel 2 regulates cardiac rhythmicity. Elife. 2015 Jan 15; 4. Shimizu H, Schredelseker J, Huang J, Lu K, Naghdi S, Lu F, Franklin S, Fiji HD, Wang K, Zhu H, Tian C, Lin B, Nakano H, Ehrlich A, Nakai J, Stieg AZ, Gimzewski JK, Nakano A, Goldhaber JI, Vondriska TM, Hajnóczky G, Kwon O, Chen JN. PMID: 25588501; PMCID: PMC4293673.
    View in: PubMed   Mentions: 45     Fields:    Translation:AnimalsCells
  51. IRE1 phosphatase PP2Ce regulates adaptive ER stress response in the postpartum mammary gland. PLoS One. 2014; 9(11):e111606. Ren S, Lu G, Ota A, Zhou ZH, Vondriska TM, Lane TF, Wang Y. PMID: 25369058; PMCID: PMC4219728.
    View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
  52. Mesenchymal-endothelial transition contributes to cardiac neovascularization. Nature. 2014 Oct 30; 514(7524):585-90. Ubil E, Duan J, Pillai IC, Rosa-Garrido M, Wu Y, Bargiacchi F, Lu Y, Stanbouly S, Huang J, Rojas M, Vondriska TM, Stefani E, Deb A. PMID: 25317562; PMCID: PMC4214889.
    View in: PubMed   Mentions: 191     Fields:    Translation:AnimalsCells
  53. Proteomics in chromatin biology and epigenetics. Proteomics. 2014 Oct; 14(19):2105-8. Vondriska TM, Jensen ON. PMID: 25274254.
    View in: PubMed   Mentions:    Fields:    Translation:HumansCells
  54. How the proteome packages the genome for cardiovascular development. Proteomics. 2014 Oct; 14(19):2115-26. Karbassi E, Vondriska TM. PMID: 25074278; PMCID: PMC4270204.
    View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
  55. Epigenomes: the missing heritability in human cardiovascular disease? Proteomics Clin Appl. 2014 Aug; 8(7-8):480-7. Monte E, Vondriska TM. PMID: 24957631; PMCID: PMC4267468.
    View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
  56. Positive feedback in cardioprotection: can more mechanism lead to translation? Circ Res. 2014 Apr 11; 114(8):1225-7. Chapski DJ, Monte E, Vondriska TM. PMID: 24723653; PMCID: PMC4085981.
    View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
  57. Systems proteomics of cardiac chromatin identifies nucleolin as a regulator of growth and cellular plasticity in cardiomyocytes. Am J Physiol Heart Circ Physiol. 2013 Dec 01; 305(11):H1624-38. Monte E, Mouillesseaux K, Chen H, Kimball T, Ren S, Wang Y, Chen JN, Vondriska TM, Franklin S. PMID: 24077883; PMCID: PMC3882469.
    View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
  58. PPM1l encodes an inositol requiring-protein 1 (IRE1) specific phosphatase that regulates the functional outcome of the ER stress response. Mol Metab. 2013; 2(4):405-16. Lu G, Ota A, Ren S, Franklin S, Rau CD, Ping P, Lane TF, Zhou ZH, Reue K, Lusis AJ, Vondriska T, Wang Y. PMID: 24327956; PMCID: PMC3854994.
    View in: PubMed   Mentions: 20     Fields:    
  59. Regulation of chromatin structure in the cardiovascular system. Circ J. 2013; 77(6):1389-98. Rosa-Garrido M, Karbassi E, Monte E, Vondriska TM. PMID: 23575346; PMCID: PMC3704339.
    View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
  60. Systems proteomics of healthy and diseased chromatin. Methods Mol Biol. 2013; 1005:77-93. Chen H, Monte E, Vondriska TM, Franklin S. PMID: 23606250; PMCID: PMC3704334.
    View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
  61. Quantitative analysis of chromatin proteomes in disease. J Vis Exp. 2012 Dec 28; (70). Monte E, Chen H, Kolmakova M, Parvatiyar M, Vondriska TM, Franklin S. PMID: 23299252; PMCID: PMC3577865.
    View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
  62. Structural considerations for chromatin state models with transcription as a functional readout. FEBS Lett. 2012 Oct 19; 586(20):3548-54. Chen H, Monte E, Parvatiyar MS, Rosa-Garrido M, Franklin S, Vondriska TM. PMID: 22940112; PMCID: PMC3495570.
    View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
  63. Features of endogenous cardiomyocyte chromatin revealed by super-resolution STED microscopy. J Mol Cell Cardiol. 2012 Oct; 53(4):552-8. Mitchell-Jordan S, Chen H, Franklin S, Stefani E, Bentolila LA, Vondriska TM. PMID: 22846883; PMCID: PMC3704345.
    View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
  64. Preclinical trials: Keep 'reproducibility' in context. Nature. 2012 May 02; 485(7396):41. Picha B, Thompson M, Vondriska TM. PMID: 22552083.
    View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimals
  65. Quantitative analysis of the chromatin proteome in disease reveals remodeling principles and identifies high mobility group protein B2 as a regulator of hypertrophic growth. Mol Cell Proteomics. 2012 Jun; 11(6):M111.014258. Franklin S, Chen H, Mitchell-Jordan S, Ren S, Wang Y, Vondriska TM. PMID: 22270000; PMCID: PMC3433888.
    View in: PubMed   Mentions: 37     Fields:    Translation:AnimalsCells
  66. Genomes, proteomes, and the central dogma. Circ Cardiovasc Genet. 2011 Oct; 4(5):576. Franklin S, Vondriska TM. PMID: 22010165; PMCID: PMC3200573.
    View in: PubMed   Mentions: 14     Fields:    Translation:Humans
  67. Highly efficient purification of protein complexes from mammalian cells using a novel streptavidin-binding peptide and hexahistidine tandem tag system: application to Bruton's tyrosine kinase. Protein Sci. 2011 Jan; 20(1):140-9. Li Y, Franklin S, Zhang MJ, Vondriska TM. PMID: 21080425; PMCID: PMC3047070.
    View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
  68. Specialized compartments of cardiac nuclei exhibit distinct proteomic anatomy. Mol Cell Proteomics. 2011 Jan; 10(1):M110.000703. Franklin S, Zhang MJ, Chen H, Paulsson AK, Mitchell-Jordan SA, Li Y, Ping P, Vondriska TM. PMID: 20807835; PMCID: PMC3013444.
    View in: PubMed   Mentions: 23     Fields:    Translation:AnimalsCells
  69. Stress signaling by Tec tyrosine kinase in the ischemic myocardium. Am J Physiol Heart Circ Physiol. 2010 Sep; 299(3):H713-22. Zhang MJ, Franklin S, Li Y, Wang S, Ru X, Mitchell-Jordan SA, Mano H, Stefani E, Ping P, Vondriska TM. PMID: 20543088; PMCID: PMC2944495.
    View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
  70. Post-translational regulation of calsarcin-1 during pressure overload-induced cardiac hypertrophy. J Mol Cell Cardiol. 2010 Jun; 48(6):1206-14. Paulsson AK, Franklin S, Mitchell-Jordan SA, Ren S, Wang Y, Vondriska TM. PMID: 20170660; PMCID: PMC2866759.
    View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsCells
  71. Target identification using drug affinity responsive target stability (DARTS). Proc Natl Acad Sci U S A. 2009 Dec 22; 106(51):21984-9. Lomenick B, Hao R, Jonai N, Chin RM, Aghajan M, Warburton S, Wang J, Wu RP, Gomez F, Loo JA, Wohlschlegel JA, Vondriska TM, Pelletier J, Herschman HR, Clardy J, Clarke CF, Huang J. PMID: 19995983; PMCID: PMC2789755.
    View in: PubMed   Mentions: 373     Fields:    Translation:Cells
  72. Protein phosphatase 2Cm is a critical regulator of branched-chain amino acid catabolism in mice and cultured cells. J Clin Invest. 2009 Jun; 119(6):1678-87. Lu G, Sun H, She P, Youn JY, Warburton S, Ping P, Vondriska TM, Cai H, Lynch CJ, Wang Y. PMID: 19411760; PMCID: PMC2689111.
    View in: PubMed   Mentions: 111     Fields:    Translation:HumansAnimalsCells
  73. Proteomics to identify proteins interacting with P2X2 ligand-gated cation channels. J Vis Exp. 2009 May 18; (27). Singh H, Warburton S, Vondriska TM, Khakh BS. PMID: 19455095; PMCID: PMC2794295.
    View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
  74. The effects of cascade length, kinetics and feedback loops on biological signal transduction dynamics in a simplified cascade model. Phys Biol. 2009 Feb 25; 6(1):016007. Qu Z, Vondriska TM. PMID: 19242047; PMCID: PMC2761888.
    View in: PubMed   Mentions: 10     Fields:    Translation:Cells
  75. A new (heat) shocking player in cardiac hypertrophy. Circ Res. 2008 Nov 21; 103(11):1194-6. Vondriska TM, Wang Y. PMID: 19028916; PMCID: PMC2903428.
    View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
  76. Loss of Bmx nonreceptor tyrosine kinase prevents pressure overload-induced cardiac hypertrophy. Circ Res. 2008 Dec 05; 103(12):1359-62. Mitchell-Jordan SA, Holopainen T, Ren S, Wang S, Warburton S, Zhang MJ, Alitalo K, Wang Y, Vondriska TM. PMID: 18988895; PMCID: PMC2735252.
    View in: PubMed   Mentions: 14     Fields:    Translation:Animals
  77. Deducing topology of protein-protein interaction networks from experimentally measured sub-networks. BMC Bioinformatics. 2008 Jul 03; 9:301. Yang L, Vondriska TM, Han Z, Maclellan WR, Weiss JN, Qu Z. PMID: 18598366; PMCID: PMC2474618.
    View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
  78. Proteomic insights into cardiac cell death and survival. Proteomics Clin Appl. 2008 Jun; 2(6):837-44. Maclellan WR, Wang Y, Vondriska TM, Weiss JN, Ping P. PMID: 21136883; PMCID: PMC3808833.
    View in: PubMed   Mentions:    Fields:    
  79. Altered proteome biology of cardiac mitochondria under stress conditions. J Proteome Res. 2008 Jun; 7(6):2204-14. Zhang J, Liem DA, Mueller M, Wang Y, Zong C, Deng N, Vondriska TM, Korge P, Drews O, Maclellan WR, Honda H, Weiss JN, Apweiler R, Ping P. PMID: 18484766; PMCID: PMC3805274.
    View in: PubMed   Mentions: 24     Fields:    Translation:AnimalsCells
  80. Acrolein consumption exacerbates myocardial ischemic injury and blocks nitric oxide-induced PKCepsilon signaling and cardioprotection. J Mol Cell Cardiol. 2008 Jun; 44(6):1016-1022. Wang GW, Guo Y, Vondriska TM, Zhang J, Zhang S, Tsai LL, Zong NC, Bolli R, Bhatnagar A, Prabhu SD. PMID: 18468618.
    View in: PubMed   Mentions: 46     Fields:    Translation:AnimalsCells
  81. Systematic characterization of the murine mitochondrial proteome using functionally validated cardiac mitochondria. Proteomics. 2008 Apr; 8(8):1564-75. Zhang J, Li X, Mueller M, Wang Y, Zong C, Deng N, Vondriska TM, Liem DA, Yang JI, Korge P, Honda H, Weiss JN, Apweiler R, Ping P. PMID: 18348319; PMCID: PMC2799225.
    View in: PubMed   Mentions: 49     Fields:    Translation:HumansAnimalsCells
  82. Cardiovascular Initiative of the Human Proteome Organisation, 5th Workshop October 2007, Seoul, Korea. Proteomics. 2008 Mar; 8(5):924-6. Warburton S, White MY, Van Eyk JE, Cotter RJ, Ping P, Dunn MJ, Vondriska TM. PMID: 18240139.
    View in: PubMed   Mentions:    Fields:    Translation:Humans
  83. Protein targets of oxidized phospholipids in endothelial cells. J Lipid Res. 2008 Mar; 49(3):510-20. Gugiu BG, Mouillesseaux K, Duong V, Herzog T, Hekimian A, Koroniak L, Vondriska TM, Watson AD. PMID: 18071189.
    View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
  84. The minimum information about a proteomics experiment (MIAPE). Nat Biotechnol. 2007 Aug; 25(8):887-93. Taylor CF, Paton NW, Lilley KS, Binz PA, Julian RK, Jones AR, Zhu W, Apweiler R, Aebersold R, Deutsch EW, Dunn MJ, Heck AJ, Leitner A, Macht M, Mann M, Martens L, Neubert TA, Patterson SD, Ping P, Seymour SL, Souda P, Tsugita A, Vandekerckhove J, Vondriska TM, Whitelegge JP, Wilkins MR, Xenarios I, Yates JR, Hermjakob H. PMID: 17687369.
    View in: PubMed   Mentions: 239     Fields:    Translation:Humans
  85. Signal transduction network motifs and biological memory. J Theor Biol. 2007 Jun 21; 246(4):755-61. Han Z, Vondriska TM, Yang L, Robb MacLellan W, Weiss JN, Qu Z. PMID: 17374382; PMCID: PMC2701969.
    View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
  86. Cardiovascular-related proteins identified in human plasma by the HUPO Plasma Proteome Project pilot phase. Proteomics. 2005 Aug; 5(13):3520-30. Berhane BT, Zong C, Liem DA, Huang A, Le S, Edmondson RD, Jones RC, Qiao X, Whitelegge JP, Ping P, Vondriska TM. PMID: 16052623.
    View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
  87. A functional annotation of subproteomes in human plasma. Proteomics. 2005 Aug; 5(13):3506-19. Ping P, Vondriska TM, Creighton CJ, Gandhi TK, Yang Z, Menon R, Kwon MS, Cho SY, Drwal G, Kellmann M, Peri S, Suresh S, Gronborg M, Molina H, Chaerkady R, Rekha B, Shet AS, Gerszten RE, Wu H, Raftery M, Wasinger V, Schulz-Knappe P, Hanash SM, Paik YK, Hancock WS, States DJ, Omenn GS, Pandey A. PMID: 16104058.
    View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
  88. The murine cardiac 26S proteasome: an organelle awaiting exploration. Ann N Y Acad Sci. 2005 Jun; 1047:197-207. Gomes AV, Zong C, Edmondson RD, Berhane BT, Wang GW, Le S, Young G, Zhang J, Vondriska TM, Whitelegge JP, Jones RC, Joshua IG, Thyparambil S, Pantaleon D, Qiao J, Loo J, Ping P. PMID: 16093497.
    View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
  89. Functional proteomic analysis of a three-tier PKCepsilon-Akt-eNOS signaling module in cardiac protection. Am J Physiol Heart Circ Physiol. 2005 Feb; 288(2):H954-61. Zhang J, Baines CP, Zong C, Cardwell EM, Wang G, Vondriska TM, Ping P. PMID: 15528226.
    View in: PubMed   Mentions: 30     Fields:    Translation:AnimalsCells
  90. Nitric oxide donors protect murine myocardium against infarction via modulation of mitochondrial permeability transition. Am J Physiol Heart Circ Physiol. 2005 Mar; 288(3):H1290-5. Wang G, Liem DA, Vondriska TM, Honda HM, Korge P, Pantaleon DM, Qiao X, Wang Y, Weiss JN, Ping P. PMID: 15528225.
    View in: PubMed   Mentions: 48     Fields:    Translation:AnimalsCells
  91. Heart disease leaves its mark: proteomics-based biosignatures in acute coronary syndromes. J Am Coll Cardiol. 2004 Oct 19; 44(8):1584-6. MacLellan WR, Ping P, Vondriska T. PMID: 15489089.
    View in: PubMed   Mentions: 1     Fields:    Translation:Humans
  92. Scaffold proteins and assembly of multiprotein signaling complexes. J Mol Cell Cardiol. 2004 Aug; 37(2):391-7. Vondriska TM, Pass JM, Ping P. PMID: 15276009.
    View in: PubMed   Mentions: 16     Fields:    Translation:HumansAnimalsCells
  93. Bmx, a member of the Tec family of nonreceptor tyrosine kinases, is a novel participant in pharmacological cardioprotection. Am J Physiol Heart Circ Physiol. 2004 Nov; 287(5):H2364-6. Zhang J, Ping P, Wang GW, Lu M, Pantaleon D, Tang XL, Bolli R, Vondriska TM. PMID: 15191890.
    View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
  94. Multiprotein signaling complexes and regulation of cardiac phenotype. J Mol Cell Cardiol. 2003 Sep; 35(9):1027-33. Vondriska TM, Ping P. PMID: 12967625.
    View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
  95. Cardioprotection involves activation of NF-kappa B via PKC-dependent tyrosine and serine phosphorylation of I kappa B-alpha. Am J Physiol Heart Circ Physiol. 2003 Oct; 285(4):H1753-8. Zhang J, Ping P, Vondriska TM, Tang XL, Wang GW, Cardwell EM, Bolli R. PMID: 12829431.
    View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
  96. Functional proteomic analysis of the protein kinase C signaling system. Methods Mol Biol. 2003; 233:369-85. Pass JM, Zhang J, Vondriska TM, Ping P. PMID: 12840523.
    View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
  97. Cardiac toxic effects of trans-2-hexenal are mediated by induction of cardiomyocyte apoptotic pathways. Cardiovasc Toxicol. 2003; 3(4):341-51. Ping P, Baines CP, Gu Y, Prabhu SD, Zhang J, Tsai LL, Cardwell E, Zong NC, Vondriska TM, Korge P, Bhatnagar A, Wang GW. PMID: 14734831.
    View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
  98. Protein tyrosine kinase signaling is necessary for NO donor-induced late preconditioning against myocardial stunning. Am J Physiol Heart Circ Physiol. 2003 Apr; 284(4):H1441-8. Tang XL, Kodani E, Takano H, Hill M, Shinmura K, Vondriska TM, Ping P, Bolli R. PMID: 12531734.
    View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
  99. Functional proteomics to study protection of the ischaemic myocardium. Expert Opin Ther Targets. 2002 Oct; 6(5):563-70. Vondriska TM, Ping P. PMID: 12387680.
    View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
  100. Protein kinase C epsilon signaling complexes include metabolism- and transcription/translation-related proteins: complimentary separation techniques with LC/MS/MS. Mol Cell Proteomics. 2002 Jun; 1(6):421-33. Edmondson RD, Vondriska TM, Biederman KJ, Zhang J, Jones RC, Zheng Y, Allen DL, Xiu JX, Cardwell EM, Pisano MR, Ping P. PMID: 12169683.
    View in: PubMed   Mentions: 37     Fields:    Translation:HumansAnimalsCells
  101. Molecular conformation dictates signaling module formation: example of PKCepsilon and Src tyrosine kinase. Am J Physiol Heart Circ Physiol. 2002 Mar; 282(3):H1166-71. Song C, Vondriska TM, Wang GW, Klein JB, Cao X, Zhang J, Kang YJ, D'Souza S, Ping P. PMID: 11834516.
    View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
  102. Formation of protein kinase C(epsilon)-Lck signaling modules confers cardioprotection. J Clin Invest. 2002 Feb; 109(4):499-507. Ping P, Song C, Zhang J, Guo Y, Cao X, Li RC, Wu W, Vondriska TM, Pass JM, Tang XL, Pierce WM, Bolli R. PMID: 11854322; PMCID: PMC150872.
    View in: PubMed   Mentions: 50     Fields:    Translation:AnimalsCells
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