Peipei Ping

Title(s)Professor, Physiology
SchoolMedicine
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    Other Positions
    Title(s)Professor, Medicine


    Collapse Research 
    Collapse Research Activities and Funding
    The XXXVIII (38th) International Society for Heart Research - North American Section (ISHR-NAS) Conference: Novel Mechanisms of Heart Failure: Advancing New Therapies.
    NIH R13HL152570May 1, 2020 - Apr 30, 2021
    Role: Principal Investigator
    iDISCOVER: Integrated Data Science Training in CardioVascular Medicine
    NIH T32HL139450Jul 1, 2018 - Jun 30, 2023
    Role: Principal Investigator
    Omics Phenotyping for Identifying Molecular Signatures of the Healthy and Failing Heart: An Integrated Data Science Platform
    NIH R35HL135772Jan 1, 2017 - Dec 31, 2023
    Role: Principal Investigator
    Regulation of Protein Dynamics in Heart Failure
    NIH R01HL129723Aug 15, 2015 - Aug 14, 2019
    Role: Principal Investigator
    A Community Effort to Translate Protein Data to Knowledge: An Integrated Platform
    NIH U54GM114833Sep 29, 2014 - Apr 30, 2019
    Role: Principal Investigator
    Mitochondrial Dynamics In Healthy and Diseased Myocardium
    NIH R01HL123060May 1, 2014 - Mar 31, 2018
    Role: Principal Investigator
    Hexokinases and Cardioprotection
    NIH R01HL117385Aug 12, 2013 - May 31, 2017
    Role: Co-Principal Investigator
    TAS::75 0872::TAS PROTEOME BIOLOGY OF CARDIOVASCULAR DISEASE
    NIH 268201000035C-0-0-1Aug 15, 2010 - Aug 14, 2015
    Role: Principal Investigator
    Novel Signaling Mechanisms and Molecular Targets in the Stressed Myocardium
    NIH R01HL098954Jul 1, 2010 - May 31, 2015
    Role: Co-Principal Investigator
    Mitochondrial pathways in NO induced cardioprotection
    NIH R01HL101228May 1, 2010 - Feb 28, 2015
    Role: Principal Investigator
    Role of mitochondria in cardiac protection
    NIH R01HL080691Jul 15, 2006 - May 31, 2012
    Role: Principal Investigator
    Ischemic Injury and Protection
    NIH P01HL080111Apr 18, 2005 - Mar 31, 2011
    Role: Principal Investigator
    Functional Proteomic Analysis of Cardiac Mitochondria
    NIH R21HL076526Apr 1, 2004 - Sep 30, 2006
    Role: Principal Investigator
    Signaling mechanisms in pharmacologic preconditioning
    NIH R01HL065431Sep 30, 2000 - Dec 31, 2009
    Role: Principal Investigator
    PKC epsilon and Src PTK Signaling in Preconditioning
    NIH R37HL063901Feb 15, 2000 - Feb 29, 2020
    Role: Principal Investigator
    PKC epsilon and Src PTK signaling in preconditioning
    NIH R01HL063901Feb 15, 2000 - Jun 14, 2010
    Role: Principal Investigator
    REGULATION OF GRK AND AC EXPRESSION IN HEART FAILURE
    NIH R29HL058166Aug 1, 1996 - Jun 30, 2000
    Role: Principal Investigator
    ADENYLYL CYCLASE/BETA-ADRENERGIC RECEPTOR KINASE IN CHF
    NIH F32HL009097Dec 12, 1994
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. MIND-S is a deep-learning prediction model for elucidating protein post-translational modifications in human diseases. Cell Rep Methods. 2023 Mar 27; 3(3):100430. Yan Y, Jiang JY, Fu M, Wang D, Pelletier AR, Sigdel D, Ng DCM, Wang W, Ping P. PMID: 37056379; PMCID: PMC10088250.
      View in: PubMed   Mentions:
    2. Cardiovascular informatics: building a bridge to data harmony. Cardiovasc Res. 2022 02 21; 118(3):732-745. Caufield JH, Sigdel D, Fu J, Choi H, Guevara-Gonzalez V, Wang D, Ping P. PMID: 33751044; PMCID: PMC9020200.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    3. A Second Look at FAIR in Proteomic Investigations. J Proteome Res. 2021 05 07; 20(5):2182-2186. Caufield JH, Fu J, Wang D, Guevara-Gonzalez V, Wang W, Ping P. PMID: 33719446; PMCID: PMC8518219.
      View in: PubMed   Mentions:    Fields:    
    4. A high-stringency blueprint of the human proteome. Nat Commun. 2020 10 16; 11(1):5301. Adhikari S, Nice EC, Deutsch EW, Lane L, Omenn GS, Pennington SR, Paik YK, Overall CM, Corrales FJ, Cristea IM, Van Eyk JE, Uhlén M, Lindskog C, Chan DW, Bairoch A, Waddington JC, Justice JL, LaBaer J, Rodriguez H, He F, Kostrzewa M, Ping P, Gundry RL, Stewart P, Srivastava S, Srivastava S, Nogueira FCS, Domont GB, Vandenbrouck Y, Lam MPY, Wennersten S, Vizcaino JA, Wilkins M, Schwenk JM, Lundberg E, Bandeira N, Marko-Varga G, Weintraub ST, Pineau C, Kusebauch U, Moritz RL, Ahn SB, Palmblad M, Snyder MP, Aebersold R, Baker MS. PMID: 33067450; PMCID: PMC7568584.
      View in: PubMed   Mentions: 59     Fields:    Translation:Humans
    5. Identifying temporal molecular signatures underlying cardiovascular diseases: A data science platform. J Mol Cell Cardiol. 2020 08; 145:54-58. Chung NC, Choi H, Wang D, Mirza B, Pelletier AR, Sigdel D, Wang W, Ping P. PMID: 32504647; PMCID: PMC7583079.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    6. Reductive Stress Causes Pathological Cardiac Remodeling and Diastolic Dysfunction. Antioxid Redox Signal. 2020 06; 32(18):1293-1312. Shanmugam G, Wang D, Gounder SS, Fernandes J, Litovsky SH, Whitehead K, Radhakrishnan RK, Franklin S, Hoidal JR, Kensler TW, Dell'Italia L, Darley-Usmar V, Abel ED, Jones DP, Ping P, Rajasekaran NS. PMID: 32064894; PMCID: PMC7247052.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    7. Heterogeneity of proteome dynamics between connective tissue phases of adult tendon. Elife. 2020 05 12; 9. Choi H, Simpson D, Wang D, Prescott M, Pitsillides AA, Dudhia J, Clegg PD, Ping P, Thorpe CT. PMID: 32393437; PMCID: PMC7217697.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    8. TAZ encodes tafazzin, a transacylase essential for cardiolipin formation and central to the etiology of Barth syndrome. Gene. 2020 Feb 05; 726:144148. Garlid AO, Schaffer CT, Kim J, Bhatt H, Guevara-Gonzalez V, Ping P. PMID: 31647997; PMCID: PMC7646589.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimalsCells
    9. Unlocking the Secrets of Mitochondria in the Cardiovascular System: Path to a Cure in Heart Failure—A Report from the 2018 National Heart, Lung, and Blood Institute Workshop Circulation. 2019 10 01; 140(14):1205-1216. Tian R, Colucci WS, Arany Z, Bachschmid MM, Ballinger SW, Boudina S, Bruce JE, Busija DW, Dikalov S, Dorn GW, Galis ZS, Gottlieb RA, Kelly DP, Kitsis RN, Kohr MJ, Levy D, Lewandowski ED, McClung JM, Mochly-Rosen D, O'Brien KD, O'Rourke B, Park JY, Ping P, Sack MN, Sheu SS, Shi Y, Shiva S, Wallace DC, Weiss RG, Vernon HJ, Wong R, Schwartz Longacre L. PMID: 31769940; PMCID: PMC6880654.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansCells
    10. New advances in extracting and learning from protein-protein interactions within unstructured biomedical text data. Emerg Top Life Sci. 2019 Aug 16; 3(4):357-369. Caufield JH, Ping P. PMID: 33523203.
      View in: PubMed   Mentions: 1     Fields:    
    11. Quantifying the impact of public omics data. Nat Commun. 2019 08 05; 10(1):3512. Perez-Riverol Y, Zorin A, Dass G, Vu MT, Xu P, Glont M, Vizcaíno JA, Jarnuczak AF, Petryszak R, Ping P, Hermjakob H. PMID: 31383865; PMCID: PMC6683138.
      View in: PubMed   Mentions: 33     Fields:    Translation:Humans
    12. Unsupervised classification of multi-omics data during cardiac remodeling using deep learning. Methods. 2019 08 15; 166:66-73. Chung NC, Mirza B, Choi H, Wang J, Wang D, Ping P, Wang W. PMID: 30853547; PMCID: PMC6708480.
      View in: PubMed   Mentions: 17     Fields:    
    13. Cloud-Based Phrase Mining and Analysis of User-Defined Phrase-Category Association in Biomedical Publications. J Vis Exp. 2019 02 23; (144). Sigdel D, Kyi V, Zhang A, Setty SP, Liem DA, Shi Y, Wang X, Shen J, Wang W, Han J, Ping P. PMID: 30855564; PMCID: PMC7075490.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    14. Machine Learning and Integrative Analysis of Biomedical Big Data. Genes (Basel). 2019 01 28; 10(2). Mirza B, Wang W, Wang J, Choi H, Chung NC, Ping P. PMID: 30696086; PMCID: PMC6410075.
      View in: PubMed   Mentions: 80     Fields:    Translation:HumansAnimals
    15. Convergences of Life Sciences and Engineering in Understanding and Treating Heart Failure. Circ Res. 2019 01 04; 124(1):161-169. Berry JL, Zhu W, Tang YL, Krishnamurthy P, Ge Y, Cooke JP, Chen Y, Garry DJ, Yang HT, Rajasekaran NS, Koch WJ, Li S, Domae K, Qin G, Cheng K, Kamp TJ, Ye L, Hu S, Ogle BM, Rogers JM, Abel ED, Davis ME, Prabhu SD, Liao R, Pu WT, Wang Y, Ping P, Bursac N, Vunjak-Novakovic G, Wu JC, Bolli R, Menasché P, Zhang J. PMID: 30605412; PMCID: PMC6350935.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimals
    16. A reference set of curated biomedical data and metadata from clinical case reports. Sci Data. 2018 11 20; 5:180258. Caufield JH, Zhou Y, Garlid AO, Setty SP, Liem DA, Cao Q, Lee JM, Murali S, Spendlove S, Wang W, Zhang L, Sun Y, Bui A, Hermjakob H, Watson KE, Ping P. PMID: 30457569; PMCID: PMC6244181.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    17. A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts. J Vis Exp. 2018 09 20; (139). Caufield JH, Liem DA, Garlid AO, Zhou Y, Watson K, Bui AAT, Wang W, Ping P. PMID: 30295669; PMCID: PMC6235242.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    18. Integrated Dissection of Cysteine Oxidative Post-translational Modification Proteome During Cardiac Hypertrophy. J Proteome Res. 2018 12 07; 17(12):4243-4257. Wang J, Choi H, Chung NC, Cao Q, Ng DCM, Mirza B, Scruggs SB, Wang D, Garlid AO, Ping P. PMID: 30141336; PMCID: PMC6650147.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    19. Quantitative temporal analysis of protein dynamics in cardiac remodeling. J Mol Cell Cardiol. 2018 08; 121:163-172. McClatchy DB, Ma Y, Liem DA, Ng DCM, Ping P, Yates JR. PMID: 30009778; PMCID: PMC6239217.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsCells
    20. Phrase mining of textual data to analyze extracellular matrix protein patterns across cardiovascular disease. Am J Physiol Heart Circ Physiol. 2018 10 01; 315(4):H910-H924. Liem DA, Murali S, Sigdel D, Shi Y, Wang X, Shen J, Choi H, Caufield JH, Wang W, Ping P, Han J. PMID: 29775406; PMCID: PMC6230912.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    21. Biomedical Informatics on the Cloud: A Treasure Hunt for Advancing Cardiovascular Medicine. Circ Res. 2018 04 27; 122(9):1290-1301. Ping P, Hermjakob H, Polson JS, Benos PV, Wang W. PMID: 29700073; PMCID: PMC6192708.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    22. Reactome diagram viewer: data structures and strategies to boost performance. Bioinformatics. 2018 04 01; 34(7):1208-1214. Fabregat A, Sidiropoulos K, Viteri G, Marin-Garcia P, Ping P, Stein L, D'Eustachio P, Hermjakob H. PMID: 29186351; PMCID: PMC6030826.
      View in: PubMed   Mentions: 53     Fields:    Translation:Humans
    23. Reactome graph database: Efficient access to complex pathway data. PLoS Comput Biol. 2018 01; 14(1):e1005968. Fabregat A, Korninger F, Viteri G, Sidiropoulos K, Marin-Garcia P, Ping P, Wu G, Stein L, D'Eustachio P, Hermjakob H. PMID: 29377902; PMCID: PMC5805351.
      View in: PubMed   Mentions: 87     Fields:    Translation:Humans
    24. Guidelines for experimental models of myocardial ischemia and infarction. Am J Physiol Heart Circ Physiol. 2018 04 01; 314(4):H812-H838. Lindsey ML, Bolli R, Canty JM, Du XJ, Frangogiannis NG, Frantz S, Gourdie RG, Holmes JW, Jones SP, Kloner RA, Lefer DJ, Liao R, Murphy E, Ping P, Przyklenk K, Recchia FA, Schwartz Longacre L, Ripplinger CM, Van Eyk JE, Heusch G. PMID: 29351451; PMCID: PMC5966768.
      View in: PubMed   Mentions: 204     Fields:    Translation:AnimalsCells
    25. Integrated omics dissection of proteome dynamics during cardiac remodeling. Nat Commun. 2018 01 09; 9(1):120. Lau E, Cao Q, Lam MPY, Wang J, Ng DCM, Bleakley BJ, Lee JM, Liem DA, Wang D, Hermjakob H, Ping P. PMID: 29317621; PMCID: PMC5760723.
      View in: PubMed   Mentions: 35     Fields:    Translation:AnimalsCells
    26. Association between preoperative peripheral blood mononuclear cell gene expression profiles, early postoperative organ function recovery potential and long-term survival in advanced heart failure patients undergoing mechanical circulatory support. PLoS One. 2017; 12(12):e0189420. Bondar G, Togashi R, Cadeiras M, Schaenman J, Cheng RK, Masukawa L, Hai J, Bao TM, Chu D, Chang E, Bakir M, Kupiec-Weglinski S, Groysberg V, Grogan T, Meltzer J, Kwon M, Rossetti M, Elashoff D, Reed E, Ping PP, Deng MC. PMID: 29236770; PMCID: PMC5728510.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    27. Reactome enhanced pathway visualization. Bioinformatics. 2017 Nov 01; 33(21):3461-3467. Sidiropoulos K, Viteri G, Sevilla C, Jupe S, Webber M, Orlic-Milacic M, Jassal B, May B, Shamovsky V, Duenas C, Rothfels K, Matthews L, Song H, Stein L, Haw R, D'Eustachio P, Ping P, Hermjakob H, Fabregat A. PMID: 29077811; PMCID: PMC5860170.
      View in: PubMed   Mentions: 72     Fields:    Translation:Cells
    28. Flow-Responsive Vascular Endothelial Growth Factor Receptor-Protein Kinase C Isoform Epsilon Signaling Mediates Glycolytic Metabolites for Vascular Repair. Antioxid Redox Signal. 2018 Jan 01; 28(1):31-43. Baek KI, Li R, Jen N, Choi H, Kaboodrangi A, Ping P, Liem D, Beebe T, Hsiai TK. PMID: 28762754; PMCID: PMC5695747.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    29. High-Resolution Mapping of Chromatin Conformation in Cardiac Myocytes Reveals Structural Remodeling of the Epigenome in Heart Failure. Circulation. 2017 Oct 24; 136(17):1613-1625. Rosa-Garrido M, Chapski DJ, Schmitt AD, Kimball TH, Karbassi E, Monte E, Balderas E, Pellegrini M, Shih TT, Soehalim E, Liem D, Ping P, Galjart NJ, Ren S, Wang Y, Ren B, Vondriska TM. PMID: 28802249; PMCID: PMC5648689.
      View in: PubMed   Mentions: 73     Fields:    Translation:AnimalsCells
    30. Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop. J Biomed Inform. 2017 07; 71:49-57. Jagodnik KM, Koplev S, Jenkins SL, Ohno-Machado L, Paten B, Schurer SC, Dumontier M, Verborgh R, Bui A, Ping P, McKenna NJ, Madduri R, Pillai A, Ma'ayan A. PMID: 28501646; PMCID: PMC5545976.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    31. Discovering and linking public omics data sets using the Omics Discovery Index. Nat Biotechnol. 2017 05 09; 35(5):406-409. Perez-Riverol Y, Bai M, da Veiga Leprevost F, Squizzato S, Park YM, Haug K, Carroll AJ, Spalding D, Paschall J, Wang M, Del-Toro N, Ternent T, Zhang P, Buso N, Bandeira N, Deutsch EW, Campbell DS, Beavis RC, Salek RM, Sarkans U, Petryszak R, Keays M, Fahy E, Sud M, Subramaniam S, Barbera A, Jiménez RC, Nesvizhskii AI, Sansone SA, Steinbeck C, Lopez R, Vizcaíno JA, Ping P, Hermjakob H. PMID: 28486464; PMCID: PMC5831141.
      View in: PubMed   Mentions: 75     Fields:    Translation:Humans
    32. Individualized Knowledge Graph: A Viable Informatics Path to Precision Medicine. Circ Res. 2017 03 31; 120(7):1078-1080. Ping P, Watson K, Han J, Bui A. PMID: 28360346; PMCID: PMC6847981.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    33. HSPA5 Gene encoding Hsp70 chaperone BiP in the endoplasmic reticulum. Gene. 2017 Jun 30; 618:14-23. Wang J, Lee J, Liem D, Ping P. PMID: 28286085; PMCID: PMC5632570.
      View in: PubMed   Mentions: 86     Fields:    Translation:HumansAnimalsCells
    34. Equipping Physiologists with an Informatics Tool Chest: Toward an Integerated Mitochondrial Phenome. Handb Exp Pharmacol. 2017; 240:377-401. Garlid AO, Polson JS, Garlid KD, Hermjakob H, Ping P. PMID: 27995389.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    35. Proteomics Research in Cardiovascular Medicine and Biomarker Discovery. J Am Coll Cardiol. 2016 Dec 27; 68(25):2819-2830. Lam MP, Ping P, Murphy E. PMID: 28007144; PMCID: PMC5189682.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    36. Cardiovascular proteomics in the era of big data: experimental and computational advances. Clin Proteomics. 2016; 13:23. Lam MP, Lau E, Ng DC, Wang D, Ping P. PMID: 27980500; PMCID: PMC5137214.
      View in: PubMed   Mentions: 4  
    37. Connecting the Dots: From Big Data to Healthy Heart. Circulation. 2016 Aug 02; 134(5):362-4. Lau E, Watson KE, Ping P. PMID: 27481999; PMCID: PMC5096589.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    38. Data-Driven Approach To Determine Popular Proteins for Targeted Proteomics Translation of Six Organ Systems. J Proteome Res. 2016 11 04; 15(11):4126-4134. Lam MP, Venkatraman V, Xing Y, Lau E, Cao Q, Ng DC, Su AI, Ge J, Van Eyk JE, Ping P. PMID: 27356587; PMCID: PMC5120959.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    39. PRKCE gene encoding protein kinase C-epsilon-Dual roles at sarcomeres and mitochondria in cardiomyocytes. Gene. 2016 Sep 15; 590(1):90-6. Scruggs SB, Wang D, Ping P. PMID: 27312950; PMCID: PMC5366072.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    40. Gene Wiki Reviews-Raising the quality and accessibility of information about the human genome. Gene. 2016 Nov 05; 592(2):235-8. Tsueng G, Good BM, Ping P, Golemis E, Hanukoglu I, van Wijnen AJ, Su AI. PMID: 27150585; PMCID: PMC5944608.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    41. Mitochondrial Function, Biology, and Role in Disease: A Scientific Statement From the American Heart Association. Circ Res. 2016 Jun 10; 118(12):1960-91. Murphy E, Ardehali H, Balaban RS, DiLisa F, Dorn GW, Kitsis RN, Otsu K, Ping P, Rizzuto R, Sack MN, Wallace D, Youle RJ, American Heart Association Council on Basic Cardiovascular Sciences, Council on Clinical Cardiology, . PMID: 27126807; PMCID: PMC6398603.
      View in: PubMed   Mentions: 161     Fields:    Translation:AnimalsCells
    42. A large dataset of protein dynamics in the mammalian heart proteome. Sci Data. 2016 Mar 15; 3:160015. Lau E, Cao Q, Ng DC, Bleakley BJ, Dincer TU, Bot BM, Wang D, Liem DA, Lam MP, Ge J, Ping P. PMID: 26977904; PMCID: PMC4792174.
      View in: PubMed   Mentions: 41     Fields:    Translation:AnimalsCells
    43. Junctophilin-4, a component of the endoplasmic reticulum-plasma membrane junctions, regulates Ca2+ dynamics in T cells. Proc Natl Acad Sci U S A. 2016 Mar 08; 113(10):2762-7. Woo JS, Srikanth S, Nishi M, Ping P, Takeshima H, Gwack Y. PMID: 26929330; PMCID: PMC4790987.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
    44. The contribution of Alu exons to the human proteome. Genome Biol. 2016 Jan 28; 17:15. Lin L, Jiang P, Park JW, Wang J, Lu ZX, Lam MP, Ping P, Xing Y. PMID: 26821878; PMCID: PMC4731929.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    45. Acquisition, Analysis, and Sharing of Data in 2015 and Beyond: A Survey of the Landscape: A Conference Report From the American Heart Association Data Summit 2015. J Am Heart Assoc. 2015 Nov 05; 4(11). Antman EM, Benjamin EJ, Harrington RA, Houser SR, Peterson ED, Bauman MA, Brown N, Bufalino V, Califf RM, Creager MA, Daugherty A, Demets DL, Dennis BP, Ebadollahi S, Jessup M, Lauer MS, Lo B, MacRae CA, McConnell MV, McCray AT, Mello MM, Mueller E, Newburger JW, Okun S, Packer M, Philippakis A, Ping P, Prasoon P, Roger VL, Singer S, Temple R, Turner MB, Vigilante K, Warner J, Wayte P, American Heart Association Data Sharing Summit Attendees. PMID: 26541391; PMCID: PMC4845234.
      View in: PubMed   Mentions: 19     Fields:    Translation:Humans
    46. Characterization of the Cardiac Overexpression of HSPB2 Reveals Mitochondrial and Myogenic Roles Supported by a Cardiac HspB2 Interactome. PLoS One. 2015; 10(10):e0133994. Grose JH, Langston K, Wang X, Squires S, Mustafi SB, Hayes W, Neubert J, Fischer SK, Fasano M, Saunders GM, Dai Q, Christians E, Lewandowski ED, Ping P, Benjamin IJ. PMID: 26465331; PMCID: PMC4605610.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    47. Priorities and trends in the study of proteins in eye research, 1924-2014. Proteomics Clin Appl. 2015 Dec; 9(11-12):1105-22. Semba RD, Lam M, Sun K, Zhang P, Schaumberg DA, Ferrucci L, Ping P, Van Eyk JE. PMID: 26123431; PMCID: PMC4695326.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimals
    48. ProteinInferencer: Confident protein identification and multiple experiment comparison for large scale proteomics projects. J Proteomics. 2015 Nov 03; 129:25-32. Zhang Y, Xu T, Shan B, Hart J, Aslanian A, Han X, Zong N, Li H, Choi H, Wang D, Acharya L, Du L, Vogt PK, Ping P, Yates JR. PMID: 26196237; PMCID: PMC4630118.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    49. Harnessing the Power of Integrated Mitochondrial Biology and Physiology: A Special Report on the NHLBI Mitochondria in Heart Diseases Initiative. Circ Res. 2015 Jul 17; 117(3):234-8. Ping P, Gustafsson ÅB, Bers DM, Blatter LA, Cai H, Jahangir A, Kelly D, Muoio D, O'Rourke B, Rabinovitch P, Trayanova N, Van Eyk J, Weiss JN, Wong R, Schwartz Longacre L. PMID: 26185209; PMCID: PMC4535701.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    50. Prioritizing Proteomics Assay Development for Clinical Translation. J Am Coll Cardiol. 2015 Jul 14; 66(2):202-4. Lam MP, Venkatraman V, Cao Q, Wang D, Dincer TU, Lau E, Su AI, Xing Y, Ge J, Ping P, Van Eyk JE. PMID: 26160638.
      View in: PubMed   Mentions: 8     Fields:    
    51. The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling. BMC Genomics. 2015 Jun 25; 16:475. Lindskog C, Linné J, Fagerberg L, Hallström BM, Sundberg CJ, Lindholm M, Huss M, Kampf C, Choi H, Liem DA, Ping P, Väremo L, Mardinoglu A, Nielsen J, Larsson E, Pontén F, Uhlén M. PMID: 26109061; PMCID: PMC4479346.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansCells
    52. Harnessing the heart of big data. Circ Res. 2015 Mar 27; 116(7):1115-9. Scruggs SB, Watson K, Su AI, Hermjakob H, Yates JR, Lindsey ML, Ping P. PMID: 25814682; PMCID: PMC4721634.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    53. Spatial and temporal dynamics of the cardiac mitochondrial proteome. Expert Rev Proteomics. 2015 Apr; 12(2):133-46. Lau E, Huang D, Cao Q, Dincer TU, Black CM, Lin AJ, Lee JM, Wang D, Liem DA, Lam MP, Ping P. PMID: 25752359; PMCID: PMC4721584.
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    116. Proteomic insights into cardiac cell death and survival. Proteomics Clin Appl. 2008 Jun; 2(6):837-44. Maclellan WR, Wang Y, Vondriska TM, Weiss JN, Ping P. PMID: 21136883; PMCID: PMC3808833.
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    117. Altered proteome biology of cardiac mitochondria under stress conditions. J Proteome Res. 2008 Jun; 7(6):2204-14. Zhang J, Liem DA, Mueller M, Wang Y, Zong C, Deng N, Vondriska TM, Korge P, Drews O, Maclellan WR, Honda H, Weiss JN, Apweiler R, Ping P. PMID: 18484766; PMCID: PMC3805274.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    118. Understanding proteasome assembly and regulation: importance to cardiovascular medicine. Trends Cardiovasc Med. 2008 Apr; 18(3):93-8. Young GW, Wang Y, Ping P. PMID: 18436147; PMCID: PMC2441911.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    119. Systematic characterization of the murine mitochondrial proteome using functionally validated cardiac mitochondria. Proteomics. 2008 Apr; 8(8):1564-75. Zhang J, Li X, Mueller M, Wang Y, Zong C, Deng N, Vondriska TM, Liem DA, Yang JI, Korge P, Honda H, Weiss JN, Apweiler R, Ping P. PMID: 18348319; PMCID: PMC2799225.
      View in: PubMed   Mentions: 50     Fields:    Translation:HumansAnimalsCells
    120. Cardiovascular Initiative of the Human Proteome Organisation, 5th Workshop October 2007, Seoul, Korea. Proteomics. 2008 Mar; 8(5):924-6. Warburton S, White MY, Van Eyk JE, Cotter RJ, Ping P, Dunn MJ, Vondriska TM. PMID: 18240139.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    121. Loss of ABCG1 results in chronic pulmonary inflammation. J Immunol. 2008 Mar 01; 180(5):3560-8. Baldán A, Gomes AV, Ping P, Edwards PA. PMID: 18292583.
      View in: PubMed   Mentions: 60     Fields:    Translation:AnimalsCells
    122. Wiley-VCH and HUPO: A Global Effort to Advance Proteomic Science. Proteomics Clin Appl. 2008 Jan; 2(1):4-6. Ping P, Bergeron J, Apweiler R. PMID: 21136773.
      View in: PubMed   Mentions:    Fields:    
    123. Wiley-VCH and HUPO: a global effort to advance proteomic science. Proteomics. 2008 Jan; 8(1):4-6. Ping P, Bergeron J, Apweiler R. PMID: 18095363.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    124. Past and present course of cardioprotection against ischemia-reperfusion injury. J Appl Physiol (1985). 2007 Dec; 103(6):2129-36. Liem DA, Honda HM, Zhang J, Woo D, Ping P. PMID: 17673563.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    125. The minimum information about a proteomics experiment (MIAPE). Nat Biotechnol. 2007 Aug; 25(8):887-93. Taylor CF, Paton NW, Lilley KS, Binz PA, Julian RK, Jones AR, Zhu W, Apweiler R, Aebersold R, Deutsch EW, Dunn MJ, Heck AJ, Leitner A, Macht M, Mann M, Martens L, Neubert TA, Patterson SD, Ping P, Seymour SL, Souda P, Tsugita A, Vandekerckhove J, Vondriska TM, Whitelegge JP, Wilkins MR, Xenarios I, Yates JR, Hermjakob H. PMID: 17687369.
      View in: PubMed   Mentions: 236     Fields:    Translation:Humans
    126. Mammalian proteasome subpopulations with distinct molecular compositions and proteolytic activities. Mol Cell Proteomics. 2007 Nov; 6(11):2021-31. Drews O, Wildgruber R, Zong C, Sukop U, Nissum M, Weber G, Gomes AV, Ping P. PMID: 17660509.
      View in: PubMed   Mentions: 56     Fields:    Translation:AnimalsCells
    127. Exploring proteasome complexes by proteomic approaches. Proteomics. 2007 Apr; 7(7):1047-58. Drews O, Zong C, Ping P. PMID: 17390294.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimals
    128. Publication Committee meeting. HUPO 5th annual World Congress. Long Beach, CA, USA 30 October 2006. Proteomics. 2007 Apr; 7(7):1009-11. Orchard S, Heck A, Uhlen M, Ping P. PMID: 17340644.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    129. A membrane receptor for retinol binding protein mediates cellular uptake of vitamin A. Science. 2007 Feb 09; 315(5813):820-5. Kawaguchi R, Yu J, Honda J, Hu J, Whitelegge J, Ping P, Wiita P, Bok D, Sun H. PMID: 17255476.
      View in: PubMed   Mentions: 355     Fields:    Translation:HumansAnimalsCells
    130. Mitochondrial permeability transition in cardiac cell injury and death. Cardiovasc Drugs Ther. 2006 Dec; 20(6):425-32. Honda HM, Ping P. PMID: 17171295.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    131. Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Proteomics approaches to the systems biology of cardiovascular diseases. J Lipid Res. 2007 Jan; 48(1):1-8. Drake TA, Ping P. PMID: 17065662.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimalsCells
    132. Cardiovascular proteomics: tools to develop novel biomarkers and potential applications. J Am Coll Cardiol. 2006 Nov 07; 48(9):1733-41. Arab S, Gramolini AO, Ping P, Kislinger T, Stanley B, van Eyk J, Ouzounian M, MacLennan DH, Emili A, Liu PP. PMID: 17084242.
      View in: PubMed   Mentions: 47     Fields:    Translation:Humans
    133. Protein degradation by the 26S proteasome system in the normal and stressed myocardium. Antioxid Redox Signal. 2006 Sep-Oct; 8(9-10):1677-91. Gomes AV, Zong C, Ping P. PMID: 16987021.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansAnimals
    134. Gene delivery to the spinal cord: comparison between lentiviral, adenoviral, and retroviral vector delivery systems. J Neurosci Res. 2006 Aug 15; 84(3):553-67. Abdellatif AA, Pelt JL, Benton RL, Howard RM, Tsoulfas P, Ping P, Xu XM, Whittemore SR. PMID: 16786574; PMCID: PMC2862356.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansAnimalsCells
    135. HUPO Publications Committee Meeting: 21 April 2006, San Francisco, CA, USA. Proteomics. 2006 Aug; 6(16):4436-8. Orchard S, Ping P. PMID: 16897682.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    136. Regulation of murine cardiac 20S proteasomes: role of associating partners. Circ Res. 2006 Aug 18; 99(4):372-80. Zong C, Gomes AV, Drews O, Li X, Young GW, Berhane B, Qiao X, French SW, Bardag-Gorce F, Ping P. PMID: 16857963.
      View in: PubMed   Mentions: 64     Fields:    Translation:Animals
    137. Mapping the murine cardiac 26S proteasome complexes. Circ Res. 2006 Aug 18; 99(4):362-71. Gomes AV, Zong C, Edmondson RD, Li X, Stefani E, Zhang J, Jones RC, Thyparambil S, Wang GW, Qiao X, Bardag-Gorce F, Ping P. PMID: 16857966.
      View in: PubMed   Mentions: 83     Fields:    Translation:AnimalsCells
    138. Proteomics-based development of biomarkers in cardiovascular disease: mechanistic, clinical, and therapeutic insights. Mol Cell Proteomics. 2006 Oct; 5(10):1853-64. Mayr M, Zhang J, Greene AS, Gutterman D, Perloff J, Ping P. PMID: 16733263.
      View in: PubMed   Mentions: 25     Fields:    Translation:Humans
    139. Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. Proteomics. 2005 Aug; 5(13):3226-45. Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, Aebersold R, Eng J, Hancock WS, Hefta SA, Meyer H, Paik YK, Yoo JS, Ping P, Pounds J, Adkins J, Qian X, Wang R, Wasinger V, Wu CY, Zhao X, Zeng R, Archakov A, Tsugita A, Beer I, Pandey A, Pisano M, Andrews P, Tammen H, Speicher DW, Hanash SM. PMID: 16104056.
      View in: PubMed   Mentions: 231     Fields:    Translation:Humans
    140. A functional annotation of subproteomes in human plasma. Proteomics. 2005 Aug; 5(13):3506-19. Ping P, Vondriska TM, Creighton CJ, Gandhi TK, Yang Z, Menon R, Kwon MS, Cho SY, Drwal G, Kellmann M, Peri S, Suresh S, Gronborg M, Molina H, Chaerkady R, Rekha B, Shet AS, Gerszten RE, Wu H, Raftery M, Wasinger V, Schulz-Knappe P, Hanash SM, Paik YK, Hancock WS, States DJ, Omenn GS, Pandey A. PMID: 16104058.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    141. Cardiovascular-related proteins identified in human plasma by the HUPO Plasma Proteome Project pilot phase. Proteomics. 2005 Aug; 5(13):3520-30. Berhane BT, Zong C, Liem DA, Huang A, Le S, Edmondson RD, Jones RC, Qiao X, Whitelegge JP, Ping P, Vondriska TM. PMID: 16052623.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansCells
    142. Functional recovery in traumatic spinal cord injury after transplantation of multineurotrophin-expressing glial-restricted precursor cells. J Neurosci. 2005 Jul 27; 25(30):6947-57. Cao Q, Xu XM, Devries WH, Enzmann GU, Ping P, Tsoulfas P, Wood PM, Bunge MB, Whittemore SR. PMID: 16049170; PMCID: PMC2813488.
      View in: PubMed   Mentions: 110     Fields:    Translation:AnimalsCells
    143. The murine cardiac 26S proteasome: an organelle awaiting exploration. Ann N Y Acad Sci. 2005 Jun; 1047:197-207. Gomes AV, Zong C, Edmondson RD, Berhane BT, Wang GW, Le S, Young G, Zhang J, Vondriska TM, Whitelegge JP, Jones RC, Joshua IG, Thyparambil S, Pantaleon D, Qiao J, Loo J, Ping P. PMID: 16093497.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    144. PKCepsilon activation augments cardiac mitochondrial respiratory post-anoxic reserve--a putative mechanism in PKCepsilon cardioprotection. J Mol Cell Cardiol. 2005 Apr; 38(4):697-700. McCarthy J, McLeod CJ, Minners J, Essop MF, Ping P, Sack MN. PMID: 15808847.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    145. HUPO 3rd annual World Congress on Proteomics. 25-27th October, 2004, Beijing, China. Expert Rev Proteomics. 2005 Jan; 2(1):9-12. Omenn GS, Ping P. PMID: 15966848.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    146. Functional proteomic analysis of a three-tier PKCepsilon-Akt-eNOS signaling module in cardiac protection. Am J Physiol Heart Circ Physiol. 2005 Feb; 288(2):H954-61. Zhang J, Baines CP, Zong C, Cardwell EM, Wang G, Vondriska TM, Ping P. PMID: 15528226.
      View in: PubMed   Mentions: 30     Fields:    Translation:AnimalsCells
    147. Nitric oxide donors protect murine myocardium against infarction via modulation of mitochondrial permeability transition. Am J Physiol Heart Circ Physiol. 2005 Mar; 288(3):H1290-5. Wang G, Liem DA, Vondriska TM, Honda HM, Korge P, Pantaleon DM, Qiao X, Wang Y, Weiss JN, Ping P. PMID: 15528225.
      View in: PubMed   Mentions: 49     Fields:    Translation:AnimalsCells
    148. Heart disease leaves its mark: proteomics-based biosignatures in acute coronary syndromes. J Am Coll Cardiol. 2004 Oct 19; 44(8):1584-6. MacLellan WR, Ping P, Vondriska T. PMID: 15489089.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    149. Scaffold proteins and assembly of multiprotein signaling complexes. J Mol Cell Cardiol. 2004 Aug; 37(2):391-7. Vondriska TM, Pass JM, Ping P. PMID: 15276009.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansAnimalsCells
    150. Bmx, a member of the Tec family of nonreceptor tyrosine kinases, is a novel participant in pharmacological cardioprotection. Am J Physiol Heart Circ Physiol. 2004 Nov; 287(5):H2364-6. Zhang J, Ping P, Wang GW, Lu M, Pantaleon D, Tang XL, Bolli R, Vondriska TM. PMID: 15191890.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    151. Phosphorylation of serine 262 in the gap junction protein connexin-43 regulates DNA synthesis in cell-cell contact forming cardiomyocytes. J Cell Sci. 2004 Jan 26; 117(Pt 3):507-14. Doble BW, Dang X, Ping P, Fandrich RR, Nickel BE, Jin Y, Cattini PA, Kardami E. PMID: 14702389.
      View in: PubMed   Mentions: 51     Fields:    Translation:AnimalsCells
    152. Identification of novel signaling complexes by functional proteomics. Circ Res. 2003 Oct 03; 93(7):595-603. Ping P. PMID: 14525921.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimalsCells
    153. Multiprotein signaling complexes and regulation of cardiac phenotype. J Mol Cell Cardiol. 2003 Sep; 35(9):1027-33. Vondriska TM, Ping P. PMID: 12967625.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    154. Role of the mitochondrial permeability transition in myocardial disease. Circ Res. 2003 Aug 22; 93(4):292-301. Weiss JN, Korge P, Honda HM, Ping P. PMID: 12933700.
      View in: PubMed   Mentions: 186     Fields:    Translation:HumansAnimalsCells
    155. A new chapter in cardiac PKC signaling studies: searching for isoform-specific molecular targets. Focus on: "isoenzyme-selective regulation of SERCA2 gene expression by protein kinase C in neonatal rat ventricular myocytes". Am J Physiol Cell Physiol. 2003 Jul; 285(1):C19-21. Ping P. PMID: 12777253.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    156. Cardioprotection involves activation of NF-kappa B via PKC-dependent tyrosine and serine phosphorylation of I kappa B-alpha. Am J Physiol Heart Circ Physiol. 2003 Oct; 285(4):H1753-8. Zhang J, Ping P, Vondriska TM, Tang XL, Wang GW, Cardwell EM, Bolli R. PMID: 12829431.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    157. Beta-adrenergic receptor blockade modulates Bcl-X(S) expression and reduces apoptosis in failing myocardium. J Mol Cell Cardiol. 2003 May; 35(5):483-93. Prabhu SD, Wang G, Luo J, Gu Y, Ping P, Chandrasekar B. PMID: 12738230.
      View in: PubMed   Mentions: 14     Fields:    Translation:Animals
    158. Protein kinase Cepsilon interacts with and inhibits the permeability transition pore in cardiac mitochondria. Circ Res. 2003 May 02; 92(8):873-80. Baines CP, Song CX, Zheng YT, Wang GW, Zhang J, Wang OL, Guo Y, Bolli R, Cardwell EM, Ping P. PMID: 12663490; PMCID: PMC3691672.
      View in: PubMed   Mentions: 164     Fields:    Translation:AnimalsCells
    159. Cardiac toxic effects of trans-2-hexenal are mediated by induction of cardiomyocyte apoptotic pathways. Cardiovasc Toxicol. 2003; 3(4):341-51. Ping P, Baines CP, Gu Y, Prabhu SD, Zhang J, Tsai LL, Cardwell E, Zong NC, Vondriska TM, Korge P, Bhatnagar A, Wang GW. PMID: 14734831.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    160. Functional proteomic analysis of the protein kinase C signaling system. Methods Mol Biol. 2003; 233:369-85. Pass JM, Zhang J, Vondriska TM, Ping P. PMID: 12840523.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    161. Protein tyrosine kinase signaling is necessary for NO donor-induced late preconditioning against myocardial stunning. Am J Physiol Heart Circ Physiol. 2003 Apr; 284(4):H1441-8. Tang XL, Kodani E, Takano H, Hill M, Shinmura K, Vondriska TM, Ping P, Bolli R. PMID: 12531734.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    162. Protein kinase C epsilon signaling complexes include metabolism- and transcription/translation-related proteins: complimentary separation techniques with LC/MS/MS. Mol Cell Proteomics. 2002 Jun; 1(6):421-33. Edmondson RD, Vondriska TM, Biederman KJ, Zhang J, Jones RC, Zheng Y, Allen DL, Xiu JX, Cardwell EM, Pisano MR, Ping P. PMID: 12169683.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansAnimalsCells
    163. Mitochondrial PKCepsilon and MAPK form signaling modules in the murine heart: enhanced mitochondrial PKCepsilon-MAPK interactions and differential MAPK activation in PKCepsilon-induced cardioprotection. Circ Res. 2002 Mar 08; 90(4):390-7. Baines CP, Zhang J, Wang GW, Zheng YT, Xiu JX, Cardwell EM, Bolli R, Ping P. PMID: 11884367.
      View in: PubMed   Mentions: 134     Fields:    Translation:AnimalsCells
    164. Expression of activated PKC epsilon (PKC epsilon) protects the ischemic heart, without attenuating ischemic H(+) production. J Mol Cell Cardiol. 2002 Mar; 34(3):361-7. Cross HR, Murphy E, Bolli R, Ping P, Steenbergen C. PMID: 11945027.
      View in: PubMed   Mentions: 25     Fields:    Translation:AnimalsCells
    165. Formation of protein kinase C(epsilon)-Lck signaling modules confers cardioprotection. J Clin Invest. 2002 Feb; 109(4):499-507. Ping P, Song C, Zhang J, Guo Y, Cao X, Li RC, Wu W, Vondriska TM, Pass JM, Tang XL, Pierce WM, Bolli R. PMID: 11854322; PMCID: PMC150872.
      View in: PubMed   Mentions: 48     Fields:    Translation:AnimalsCells
    166. Embryonic stem cells attenuate viral myocarditis in murine model. Cell Transplant. 2002; 11(8):753-8. Wang JF, Yang Y, Wang G, Min J, Sullivan MF, Ping P, Xiao YF, Morgan JP. PMID: 12588107.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
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