Peipei Ping

Title(s)Professor, Physiology
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    Other Positions
    Title(s)Professor, Medicine

    Collapse Research 
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    The XXXVIII (38th) International Society for Heart Research - North American Section (ISHR-NAS) Conference: Novel Mechanisms of Heart Failure: Advancing New Therapies.
    NIH R13HL152570May 1, 2020 - Apr 30, 2021
    Role: Principal Investigator
    iDISCOVER: Integrated Data Science Training in CardioVascular Medicine
    NIH T32HL139450Jul 1, 2018 - Jun 30, 2023
    Role: Principal Investigator
    Omics Phenotyping for Identifying Molecular Signatures of the Healthy and Failing Heart: An Integrated Data Science Platform
    NIH R35HL135772Jan 1, 2017 - Dec 31, 2023
    Role: Principal Investigator
    Regulation of Protein Dynamics in Heart Failure
    NIH R01HL129723Aug 15, 2015 - Aug 14, 2019
    Role: Principal Investigator
    A Community Effort to Translate Protein Data to Knowledge: An Integrated Platform
    NIH U54GM114833Sep 29, 2014 - Apr 30, 2019
    Role: Principal Investigator
    Mitochondrial Dynamics In Healthy and Diseased Myocardium
    NIH R01HL123060May 1, 2014 - Mar 31, 2018
    Role: Principal Investigator
    Hexokinases and Cardioprotection
    NIH R01HL117385Aug 12, 2013 - May 31, 2017
    Role: Co-Principal Investigator
    NIH 268201000035C-0-0-1Aug 15, 2010 - Aug 14, 2015
    Role: Principal Investigator
    Novel Signaling Mechanisms and Molecular Targets in the Stressed Myocardium
    NIH R01HL098954Jul 1, 2010 - May 31, 2015
    Role: Co-Principal Investigator
    Mitochondrial pathways in NO induced cardioprotection
    NIH R01HL101228May 1, 2010 - Feb 28, 2015
    Role: Principal Investigator
    Role of mitochondria in cardiac protection
    NIH R01HL080691Jul 15, 2006 - May 31, 2012
    Role: Principal Investigator
    Ischemic Injury and Protection
    NIH P01HL080111Apr 18, 2005 - Mar 31, 2011
    Role: Principal Investigator
    Functional Proteomic Analysis of Cardiac Mitochondria
    NIH R21HL076526Apr 1, 2004 - Sep 30, 2006
    Role: Principal Investigator
    Signaling mechanisms in pharmacologic preconditioning
    NIH R01HL065431Sep 30, 2000 - Dec 31, 2009
    Role: Principal Investigator
    PKC epsilon and Src PTK Signaling in Preconditioning
    NIH R37HL063901Feb 15, 2000 - Feb 29, 2020
    Role: Principal Investigator
    PKC epsilon and Src PTK signaling in preconditioning
    NIH R01HL063901Feb 15, 2000 - Jun 14, 2010
    Role: Principal Investigator
    NIH R29HL058166Aug 1, 1996 - Jun 30, 2000
    Role: Principal Investigator
    NIH F32HL009097Dec 12, 1994
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Cardiovascular Informatics: building a bridge to data harmony. Cardiovasc Res. 2021 Mar 05. Caufield JH, Sigdel D, Fu J, Choi H, Guevara-Gonzalez V, Wang D, Ping P. PMID: 33751044.
      View in: PubMed   Mentions:    Fields:    
    2. A high-stringency blueprint of the human proteome. Nat Commun. 2020 10 16; 11(1):5301. Adhikari S, Nice EC, Deutsch EW, Lane L, Omenn GS, Pennington SR, Paik YK, Overall CM, Corrales FJ, Cristea IM, Van Eyk JE, Uhlén M, Lindskog C, Chan DW, Bairoch A, Waddington JC, Justice JL, LaBaer J, Rodriguez H, He F, Kostrzewa M, Ping P, Gundry RL, Stewart P, Srivastava S, Srivastava S, Nogueira FCS, Domont GB, Vandenbrouck Y, Lam MPY, Wennersten S, Vizcaino JA, Wilkins M, Schwenk JM, Lundberg E, Bandeira N, Marko-Varga G, Weintraub ST, Pineau C, Kusebauch U, Moritz RL, Ahn SB, Palmblad M, Snyder MP, Aebersold R, Baker MS. PMID: 33067450.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    3. Identifying temporal molecular signatures underlying cardiovascular diseases: A data science platform. J Mol Cell Cardiol. 2020 08; 145:54-58. Chung NC, Choi H, Wang D, Mirza B, Pelletier AR, Sigdel D, Wang W, Ping P. PMID: 32504647.
      View in: PubMed   Mentions:    Fields:    
    4. Heterogeneity of proteome dynamics between connective tissue phases of adult tendon. Elife. 2020 05 12; 9. Choi H, Simpson D, Wang D, Prescott M, Pitsillides AA, Dudhia J, Clegg PD, Ping P, Thorpe CT. PMID: 32393437.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    5. TAZ encodes tafazzin, a transacylase essential for cardiolipin formation and central to the etiology of Barth syndrome. Gene. 2020 Feb 05; 726:144148. Garlid AO, Schaffer CT, Kim J, Bhatt H, Guevara-Gonzalez V, Ping P. PMID: 31647997.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    6. Unlocking the Secrets of Mitochondria in the Cardiovascular System: Path to a Cure in Heart Failure—A Report from the 2018 National Heart, Lung, and Blood Institute Workshop Circulation. 2019 10 01; 140(14):1205-1216. Tian R, Colucci WS, Arany Z, Bachschmid MM, Ballinger SW, Boudina S, Bruce JE, Busija DW, Dikalov S, Dorn GW, Galis ZS, Gottlieb RA, Kelly DP, Kitsis RN, Kohr MJ, Levy D, Lewandowski ED, McClung JM, Mochly-Rosen D, O'Brien KD, O'Rourke B, Park JY, Ping P, Sack MN, Sheu SS, Shi Y, Shiva S, Wallace DC, Weiss RG, Vernon HJ, Wong R, Schwartz Longacre L. PMID: 31769940.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    7. New advances in extracting and learning from protein-protein interactions within unstructured biomedical text data. Emerg Top Life Sci. 2019 Aug 16; 3(4):357-369. Caufield JH, Ping P. PMID: 33523203.
      View in: PubMed   Mentions:
    8. Unsupervised classification of multi-omics data during cardiac remodeling using deep learning. Methods. 2019 08 15; 166:66-73. Chung NC, Mirza B, Choi H, Wang J, Wang D, Ping P, Wang W. PMID: 30853547.
      View in: PubMed   Mentions: 5     Fields:    
    9. Cloud-Based Phrase Mining and Analysis of User-Defined Phrase-Category Association in Biomedical Publications. J Vis Exp. 2019 02 23; (144). Sigdel D, Kyi V, Zhang A, Setty SP, Liem DA, Shi Y, Wang X, Shen J, Wang W, Han J, Ping P. PMID: 30855564.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    10. Machine Learning and Integrative Analysis of Biomedical Big Data. Genes (Basel). 2019 01 28; 10(2). Mirza B, Wang W, Wang J, Choi H, Chung NC, Ping P. PMID: 30696086.
      View in: PubMed   Mentions: 35     Fields:    Translation:HumansAnimals
    11. A reference set of curated biomedical data and metadata from clinical case reports. Sci Data. 2018 11 20; 5:180258. Caufield JH, Zhou Y, Garlid AO, Setty SP, Liem DA, Cao Q, Lee JM, Murali S, Spendlove S, Wang W, Zhang L, Sun Y, Bui A, Hermjakob H, Watson KE, Ping P. PMID: 30457569.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    12. A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts. J Vis Exp. 2018 09 20; (139). Caufield JH, Liem DA, Garlid AO, Zhou Y, Watson K, Bui AAT, Wang W, Ping P. PMID: 30295669.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    13. Phrase mining of textual data to analyze extracellular matrix protein patterns across cardiovascular disease. . 2018 10 01; 315(4):H910-H924. Liem DA, Murali S, Sigdel D, Shi Y, Wang X, Shen J, Choi H, Caufield JH, Wang W, Ping P, Han J. PMID: 29775406.
      View in: PubMed   Mentions:
    14. Biomedical Informatics on the Cloud: A Treasure Hunt for Advancing Cardiovascular Medicine. Circ Res. 2018 04 27; 122(9):1290-1301. Ping P, Hermjakob H, Polson JS, Benos PV, Wang W. PMID: 29700073.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    15. Integrated omics dissection of proteome dynamics during cardiac remodeling. Nat Commun. 2018 01 09; 9(1):120. Lau E, Cao Q, Lam MPY, Wang J, Ng DCM, Bleakley BJ, Lee JM, Liem DA, Wang D, Hermjakob H, Ping P. PMID: 29317621.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    16. Flow-Responsive Vascular Endothelial Growth Factor Receptor-Protein Kinase C Isoform Epsilon Signaling Mediates Glycolytic Metabolites for Vascular Repair. Antioxid Redox Signal. 2018 Jan 01; 28(1):31-43. Baek KI, Li R, Jen N, Choi H, Kaboodrangi A, Ping P, Liem D, Beebe T, Hsiai TK. PMID: 28762754.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    17. High-Resolution Mapping of Chromatin Conformation in Cardiac Myocytes Reveals Structural Remodeling of the Epigenome in Heart Failure. Circulation. 2017 Oct 24; 136(17):1613-1625. Rosa-Garrido M, Chapski DJ, Schmitt AD, Kimball TH, Karbassi E, Monte E, Balderas E, Pellegrini M, Shih TT, Soehalim E, Liem D, Ping P, Galjart NJ, Ren S, Wang Y, Ren B, Vondriska TM. PMID: 28802249.
      View in: PubMed   Mentions: 38     Fields:    Translation:AnimalsCells
    18. Individualized Knowledge Graph: A Viable Informatics Path to Precision Medicine. Circ Res. 2017 03 31; 120(7):1078-1080. Ping P, Watson K, Han J, Bui A. PMID: 28360346.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    19. HSPA5 Gene encoding Hsp70 chaperone BiP in the endoplasmic reticulum. Gene. 2017 Jun 30; 618:14-23. Wang J, Lee J, Liem D, Ping P. PMID: 28286085.
      View in: PubMed   Mentions: 37     Fields:    Translation:HumansAnimalsCells
    20. Equipping Physiologists with an Informatics Tool Chest: Toward an Integerated Mitochondrial Phenome. Handb Exp Pharmacol. 2017; 240:377-401. Garlid AO, Polson JS, Garlid KD, Hermjakob H, Ping P. PMID: 27995389.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    21. Proteomics Research in Cardiovascular Medicine and Biomarker Discovery. J Am Coll Cardiol. 2016 Dec 27; 68(25):2819-2830. Lam MP, Ping P, Murphy E. PMID: 28007144.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    22. Cardiovascular proteomics in the era of big data: experimental and computational advances. Clin Proteomics. 2016; 13:23. Lam MP, Lau E, Ng DC, Wang D, Ping P. PMID: 27980500.
      View in: PubMed   Mentions:
    23. Connecting the Dots: From Big Data to Healthy Heart. Circulation. 2016 Aug 02; 134(5):362-4. Lau E, Watson KE, Ping P. PMID: 27481999.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    24. PRKCE gene encoding protein kinase C-epsilon-Dual roles at sarcomeres and mitochondria in cardiomyocytes. Gene. 2016 Sep 15; 590(1):90-6. Scruggs SB, Wang D, Ping P. PMID: 27312950.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    25. A large dataset of protein dynamics in the mammalian heart proteome. Sci Data. 2016 Mar 15; 3:160015. Lau E, Cao Q, Ng DC, Bleakley BJ, Dincer TU, Bot BM, Wang D, Liem DA, Lam MP, Ge J, Ping P. PMID: 26977904.
      View in: PubMed   Mentions: 28     Fields:    Translation:AnimalsCells
    26. Junctophilin-4, a component of the endoplasmic reticulum-plasma membrane junctions, regulates Ca2+ dynamics in T cells. Proc Natl Acad Sci U S A. 2016 Mar 08; 113(10):2762-7. Woo JS, Srikanth S, Nishi M, Ping P, Takeshima H, Gwack Y. PMID: 26929330.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimalsCells
    27. The contribution of Alu exons to the human proteome. Genome Biol. 2016 Jan 28; 17:15. Lin L, Jiang P, Park JW, Wang J, Lu ZX, Lam MP, Ping P, Xing Y. PMID: 26821878.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    28. Harnessing the Power of Integrated Mitochondrial Biology and Physiology: A Special Report on the NHLBI Mitochondria in Heart Diseases Initiative. Circ Res. 2015 Jul 17; 117(3):234-8. Ping P, Gustafsson ÅB, Bers DM, Blatter LA, Cai H, Jahangir A, Kelly D, Muoio D, O'Rourke B, Rabinovitch P, Trayanova N, Van Eyk J, Weiss JN, Wong R, Schwartz Longacre L. PMID: 26185209.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    29. Harnessing the heart of big data. Circ Res. 2015 Mar 27; 116(7):1115-9. Scruggs SB, Watson K, Su AI, Hermjakob H, Yates JR, Lindsey ML, Ping P. PMID: 25814682.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    30. Spatial and temporal dynamics of the cardiac mitochondrial proteome. Expert Rev Proteomics. 2015 Apr; 12(2):133-46. Lau E, Huang D, Cao Q, Dincer TU, Black CM, Lin AJ, Lee JM, Wang D, Liem DA, Lam MP, Ping P. PMID: 25752359.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    31. Isoflurane protects the myocardium against ischemic injury via the preservation of mitochondrial respiration and its supramolecular organization. Anesth Analg. 2015 Feb; 120(2):265-74. Lotz C, Zhang J, Fang C, Liem D, Ping P. PMID: 25383718.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    32. Mitochondrial protein turnover: methods to measure turnover rates on a large scale. J Mol Cell Cardiol. 2015 Jan; 78:54-61. Chan XC, Black CM, Lin AJ, Ping P, Lau E. PMID: 25451168.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
    33. Hexokinases and cardioprotection. J Mol Cell Cardiol. 2015 Jan; 78:107-15. Calmettes G, Ribalet B, John S, Korge P, Ping P, Weiss JN. PMID: 25264175.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    34. Lysine ubiquitination and acetylation of human cardiac 20S proteasomes. Proteomics Clin Appl. 2014 Aug; 8(7-8):590-594. Zong N, Ping P, Lau E, Choi HJ, Ng DC, Meyer D, Fang C, Li H, Wang D, Zelaya IM, Yates JR, Lam MP. PMID: 24957502.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    35. Characterization of human plasma proteome dynamics using deuterium oxide. Proteomics Clin Appl. 2014 Aug; 8(7-8):610-9. Wang D, Liem DA, Lau E, Ng DC, Bleakley BJ, Cadeiras M, Deng MC, Lam MP, Ping P. PMID: 24946186.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCTClinical Trials
    36. Netrin-1 abrogates ischemia/reperfusion-induced cardiac mitochondrial dysfunction via nitric oxide-dependent attenuation of NOX4 activation and recoupling of NOS. J Mol Cell Cardiol. 2015 Jan; 78:174-85. Siu KL, Lotz C, Ping P, Cai H. PMID: 25066694.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    37. S-nitrosylation of TRIM72 mends the broken heart: a molecular modifier-mediated cardioprotection. J Mol Cell Cardiol. 2014 Jul; 72:292-5. X'avia Chan CY, Wang D, Cadeiras M, Deng MC, Ping P. PMID: 24735828.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    38. Characterization, design, and function of the mitochondrial proteome: from organs to organisms. J Proteome Res. 2014 Feb 07; 13(2):433-46. Lotz C, Lin AJ, Black CM, Zhang J, Lau E, Deng N, Wang Y, Zong NC, Choi JH, Xu T, Liem DA, Korge P, Weiss JN, Hermjakob H, Yates JR, Apweiler R, Ping P. PMID: 24070373.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimals
    39. Cyclophilin D and acetylation: a new link in cardiac signaling. Circ Res. 2013 Dec 06; 113(12):1268-9. Lam MP, Lau E, Liem DA, Ping P. PMID: 24311610.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    40. Regulation of acetylation restores proteolytic function of diseased myocardium in mouse and human. Mol Cell Proteomics. 2013 Dec; 12(12):3793-802. Wang D, Fang C, Zong NC, Liem DA, Cadeiras M, Scruggs SB, Yu H, Kim AK, Yang P, Deng M, Lu H, Ping P. PMID: 24037710.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimalsCells
    41. PPM1l encodes an inositol requiring-protein 1 (IRE1) specific phosphatase that regulates the functional outcome of the ER stress response. Mol Metab. 2013; 2(4):405-16. Lu G, Ota A, Ren S, Franklin S, Rau CD, Ping P, Lane TF, Zhou ZH, Reue K, Lusis AJ, Vondriska T, Wang Y. PMID: 24327956.
      View in: PubMed   Mentions: 14     Fields:    
    42. Technology platform development for targeted plasma metabolites in human heart failure. Clin Proteomics. 2013; 10(1):7. Chan CX, Khan AA, Choi JH, Ng CD, Cadeiras M, Deng M, Ping P. PMID: 23826926.
      View in: PubMed   Mentions:
    43. Oxidative stress in atrial fibrillation: an emerging role of NADPH oxidase. J Mol Cell Cardiol. 2013 Sep; 62:72-9. Youn JY, Zhang J, Zhang Y, Chen H, Liu D, Ping P, Weiss JN, Cai H. PMID: 23643589.
      View in: PubMed   Mentions: 62     Fields:    Translation:HumansAnimals
    44. Divergent mitochondrial biogenesis responses in human cardiomyopathy. Circulation. 2013 May 14; 127(19):1957-67. Ahuja P, Wanagat J, Wang Z, Wang Y, Liem DA, Ping P, Antoshechkin IA, Margulies KB, Maclellan WR. PMID: 23589024.
      View in: PubMed   Mentions: 31     Fields:    Translation:Humans
    45. A novel spectral library workflow to enhance protein identifications. J Proteomics. 2013 Apr 09; 81:173-84. Li H, Zong NC, Liang X, Kim AK, Choi JH, Deng N, Zelaya I, Lam M, Duan H, Ping P. PMID: 23391412.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    46. Site-specific quantitative analysis of cardiac mitochondrial protein phosphorylation. J Proteomics. 2013 Apr 09; 81:15-23. Lam MP, Lau E, Scruggs SB, Wang D, Kim TY, Liem DA, Zhang J, Ryan CM, Faull KF, Ping P. PMID: 23022582.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    47. Metabolic labeling reveals proteome dynamics of mouse mitochondria. Mol Cell Proteomics. 2012 Dec; 11(12):1586-94. Kim TY, Wang D, Kim AK, Lau E, Lin AJ, Liem DA, Zhang J, Zong NC, Lam MP, Ping P. PMID: 22915825.
      View in: PubMed   Mentions: 73     Fields:    Translation:AnimalsCells
    48. ABCC6 localizes to the mitochondria-associated membrane. Circ Res. 2012 Aug 17; 111(5):516-20. Martin LJ, Lau E, Singh H, Vergnes L, Tarling EJ, Mehrabian M, Mungrue I, Xiao S, Shih D, Castellani L, Ping P, Reue K, Stefani E, Drake TA, Bostrom K, Lusis AJ. PMID: 22811557.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    49. Perspectives on: SGP symposium on mitochondrial physiology and medicine: mitochondrial proteome design: from molecular identity to pathophysiological regulation. J Gen Physiol. 2012 Jun; 139(6):395-406. Zhang J, Lin A, Powers J, Lam MP, Lotz C, Liem D, Lau E, Wang D, Deng N, Korge P, Zong NC, Cai H, Weiss J, Ping P. PMID: 22641634.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    50. Post-translational modification of cardiac proteasomes: functional delineation enabled by proteomics. . 2012 Jul; 303(1):H9-18. Scruggs SB, Zong NC, Wang D, Stefani E, Ping P. PMID: 22523251.
      View in: PubMed   Mentions:
    51. Substrate- and isoform-specific proteome stability in normal and stressed cardiac mitochondria. Circ Res. 2012 Apr 27; 110(9):1174-8. Lau E, Wang D, Zhang J, Yu H, Lam MP, Liang X, Zong N, Kim TY, Ping P. PMID: 22456183.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    52. HUPO 2011: The new Cardiovascular Initiative - integrating proteomics and cardiovascular biology in health and disease. Proteomics. 2012 Mar; 12(6):749-51. Lam MP, Vivanco F, Scholten A, Hermjakob H, Van Eyk J, Ping P. PMID: 22539426.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimals
    53. An MRM-based workflow for quantifying cardiac mitochondrial protein phosphorylation in murine and human tissue. J Proteomics. 2012 Aug 03; 75(15):4602-9. Lam MP, Scruggs SB, Kim TY, Zong C, Lau E, Wang D, Ryan CM, Faull KF, Ping P. PMID: 22387130.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansAnimalsCells
    54. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics. 2012 Jan; 12(1):11-20. Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H. PMID: 22069307.
      View in: PubMed   Mentions: 7     Fields:    
    55. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). J Proteome Res. 2012 Feb 03; 11(2):1412-9. Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H. PMID: 22053864.
      View in: PubMed   Mentions: 10     Fields:    
    56. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics Clin Appl. 2011 Dec; 5(11-12):580-9. Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H. PMID: 22213554.
      View in: PubMed   Mentions: 3     Fields:    
    57. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). Mol Cell Proteomics. 2011 Dec; 10(12):O111.015446. Kinsinger CR, Apffel J, Baker M, Bian X, Borchers CH, Bradshaw R, Brusniak MY, Chan DW, Deutsch EW, Domon B, Gorman J, Grimm R, Hancock W, Hermjakob H, Horn D, Hunter C, Kolar P, Kraus HJ, Langen H, Linding R, Moritz RL, Omenn GS, Orlando R, Pandey A, Ping P, Rahbar A, Rivers R, Seymour SL, Simpson RJ, Slotta D, Smith RD, Stein SE, Tabb DL, Tagle D, Yates JR, Rodriguez H. PMID: 22052993.
      View in: PubMed   Mentions: 9     Fields:    
    58. New horizons in cardioprotection: recommendations from the 2010 National Heart, Lung, and Blood Institute Workshop. Circulation. 2011 Sep 06; 124(10):1172-9. Schwartz Longacre L, Kloner RA, Arai AE, Baines CP, Bolli R, Braunwald E, Downey J, Gibbons RJ, Gottlieb RA, Heusch G, Jennings RB, Lefer DJ, Mentzer RM, Murphy E, Ovize M, Ping P, Przyklenk K, Sack MN, Vander Heide RS, Vinten-Johansen J, Yellon DM, National Heart, Lung, and Blood Institute, National Institutes of Health . PMID: 21900096.
      View in: PubMed   Mentions: 76     Fields:    Translation:Humans
    59. New frontiers in myocardial protection: a systems biology approach. J Cardiovasc Pharmacol Ther. 2011 Sep-Dec; 16(3-4):285-9. Lotz C, Liem D, Ping P. PMID: 21821530.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimals
    60. Heterogeneous cardiac proteasomes: mandated by diverse substrates? Physiology (Bethesda). 2011 Apr; 26(2):106-14. Scruggs SB, Ping P, Zong C. PMID: 21487029.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    61. Managing the quality of life for proteins: focusing on the exit path. Introduction. Mol Cell Proteomics. 2011 May; 10(5):O111.009969. Ping P, Mayor T, Huang L. PMID: 21441579.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    62. Proteome dynamics and proteome function of cardiac 19S proteasomes. Mol Cell Proteomics. 2011 May; 10(5):M110.006122. Wang D, Zong C, Koag MC, Wang Y, Drews O, Fang C, Scruggs SB, Ping P. PMID: 21357515.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    63. Differential regulation of proteasome function in isoproterenol-induced cardiac hypertrophy. Circ Res. 2010 Oct 29; 107(9):1094-101. Drews O, Tsukamoto O, Liem D, Streicher J, Wang Y, Ping P. PMID: 20814020.
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    64. Specialized compartments of cardiac nuclei exhibit distinct proteomic anatomy. Mol Cell Proteomics. 2011 Jan; 10(1):M110.000703. Franklin S, Zhang MJ, Chen H, Paulsson AK, Mitchell-Jordan SA, Li Y, Ping P, Vondriska TM. PMID: 20807835.
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    65. Stress signaling by Tec tyrosine kinase in the ischemic myocardium. . 2010 Sep; 299(3):H713-22. Zhang MJ, Franklin S, Li Y, Wang S, Ru X, Mitchell-Jordan SA, Mano H, Stefani E, Ping P, Vondriska TM. PMID: 20543088.
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    66. Advancing cardiovascular biology and medicine via proteomics: Opportunities and present challenges of cardiovascular proteomics. Circulation. 2010 Jun 01; 121(21):2326-8. Ping P, Chan DW, Srinivas P. PMID: 20516387.
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    67. Phosphoproteome analysis reveals regulatory sites in major pathways of cardiac mitochondria. Mol Cell Proteomics. 2011 Feb; 10(2):M110.000117. Deng N, Zhang J, Zong C, Wang Y, Lu H, Yang P, Wang W, Young GW, Wang Y, Korge P, Lotz C, Doran P, Liem DA, Apweiler R, Weiss JN, Duan H, Ping P. PMID: 20495213.
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    68. Letter by Lotz et al regarding article, "Reactive oxygen species-induced stimulation of 5' AMP-activated protein kinase mediates sevoflurane-induced cardioprotection". Circulation. 2010 May 11; 121(18):e399; author reply e400. Lotz C, Ping P, Kehl F. PMID: 20458019.
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    69. Specific regulation of noncanonical p38alpha activation by Hsp90-Cdc37 chaperone complex in cardiomyocyte. Circ Res. 2010 Apr 30; 106(8):1404-12. Ota A, Zhang J, Ping P, Han J, Wang Y. PMID: 20299663.
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    70. Post-translational modifications of integral membrane proteins resolved by top-down Fourier transform mass spectrometry with collisionally activated dissociation. Mol Cell Proteomics. 2010 May; 9(5):791-803. Ryan CM, Souda P, Bassilian S, Ujwal R, Zhang J, Abramson J, Ping P, Durazo A, Bowie JU, Hasan SS, Baniulis D, Cramer WA, Faull KF, Whitelegge JP. PMID: 20093275.
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    71. Protein phosphatase 2Cm is a critical regulator of branched-chain amino acid catabolism in mice and cultured cells. J Clin Invest. 2009 Jun; 119(6):1678-87. Lu G, Sun H, She P, Youn JY, Warburton S, Ping P, Vondriska TM, Cai H, Lynch CJ, Wang Y. PMID: 19411760.
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    72. Crystal packing analysis of murine VDAC1 crystals in a lipidic environment reveals novel insights on oligomerization and orientation. Channels (Austin). 2009 May-Jun; 3(3):167-70. Ujwal R, Cascio D, Chaptal V, Ping P, Abramson J. PMID: 19574737.
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    73. Getting to the heart of proteomics. N Engl J Med. 2009 Jan 29; 360(5):532-4. Ping P. PMID: 19179323.
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    74. Two-dimensional electrophoresis-based characterization of post-translational modifications of mammalian 20S proteasome complexes. Proteomics. 2008 Dec; 8(23-24):5025-37. Zong C, Young GW, Wang Y, Lu H, Deng N, Drews O, Ping P. PMID: 19003867.
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    75. The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating. Proc Natl Acad Sci U S A. 2008 Nov 18; 105(46):17742-7. Ujwal R, Cascio D, Colletier JP, Faham S, Zhang J, Toro L, Ping P, Abramson J. PMID: 18988731.
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    76. Contrasting proteome biology and functional heterogeneity of the 20 S proteasome complexes in mammalian tissues. Mol Cell Proteomics. 2009 Feb; 8(2):302-15. Gomes AV, Young GW, Wang Y, Zong C, Eghbali M, Drews O, Lu H, Stefani E, Ping P. PMID: 18931337.
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    77. Reactive oxygen species production in energized cardiac mitochondria during hypoxia/reoxygenation: modulation by nitric oxide. Circ Res. 2008 Oct 10; 103(8):873-80. Korge P, Ping P, Weiss JN. PMID: 18776040.
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    78. Cyclin-dependent kinase 2 signaling regulates myocardial ischemia/reperfusion injury. J Mol Cell Cardiol. 2008 Nov; 45(5):610-6. Liem DA, Zhao P, Angelis E, Chan SS, Zhang J, Wang G, Berthet C, Kaldis P, Ping P, MacLellan WR. PMID: 18692063.
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    79. Revealing the dynamics of the 20 S proteasome phosphoproteome: a combined CID and electron transfer dissociation approach. Mol Cell Proteomics. 2008 Nov; 7(11):2073-89. Lu H, Zong C, Wang Y, Young GW, Deng N, Souda P, Li X, Whitelegge J, Drews O, Yang PY, Ping P. PMID: 18579562.
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    80. Proteomic insights into cardiac cell death and survival. Proteomics Clin Appl. 2008 Jun; 2(6):837-44. Maclellan WR, Wang Y, Vondriska TM, Weiss JN, Ping P. PMID: 21136883.
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    81. Altered proteome biology of cardiac mitochondria under stress conditions. J Proteome Res. 2008 Jun; 7(6):2204-14. Zhang J, Liem DA, Mueller M, Wang Y, Zong C, Deng N, Vondriska TM, Korge P, Drews O, Maclellan WR, Honda H, Weiss JN, Apweiler R, Ping P. PMID: 18484766.
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    82. Systematic characterization of the murine mitochondrial proteome using functionally validated cardiac mitochondria. Proteomics. 2008 Apr; 8(8):1564-75. Zhang J, Li X, Mueller M, Wang Y, Zong C, Deng N, Vondriska TM, Liem DA, Yang JI, Korge P, Honda H, Weiss JN, Apweiler R, Ping P. PMID: 18348319.
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    83. Understanding proteasome assembly and regulation: importance to cardiovascular medicine. Trends Cardiovasc Med. 2008 Apr; 18(3):93-8. Young GW, Wang Y, Ping P. PMID: 18436147.
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    84. Cardiovascular Initiative of the Human Proteome Organisation, 5th Workshop October 2007, Seoul, Korea. Proteomics. 2008 Mar; 8(5):924-6. Warburton S, White MY, Van Eyk JE, Cotter RJ, Ping P, Dunn MJ, Vondriska TM. PMID: 18240139.
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    85. Loss of ABCG1 results in chronic pulmonary inflammation. J Immunol. 2008 Mar 01; 180(5):3560-8. Baldán A, Gomes AV, Ping P, Edwards PA. PMID: 18292583.
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    86. Past and present course of cardioprotection against ischemia-reperfusion injury. J Appl Physiol (1985). 2007 Dec; 103(6):2129-36. Liem DA, Honda HM, Zhang J, Woo D, Ping P. PMID: 17673563.
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    87. Mammalian proteasome subpopulations with distinct molecular compositions and proteolytic activities. Mol Cell Proteomics. 2007 Nov; 6(11):2021-31. Drews O, Wildgruber R, Zong C, Sukop U, Nissum M, Weber G, Gomes AV, Ping P. PMID: 17660509.
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    88. Exploring proteasome complexes by proteomic approaches. Proteomics. 2007 Apr; 7(7):1047-58. Drews O, Zong C, Ping P. PMID: 17390294.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimals
    89. A membrane receptor for retinol binding protein mediates cellular uptake of vitamin A. Science. 2007 Feb 09; 315(5813):820-5. Kawaguchi R, Yu J, Honda J, Hu J, Whitelegge J, Ping P, Wiita P, Bok D, Sun H. PMID: 17255476.
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    90. Mitochondrial permeability transition in cardiac cell injury and death. Cardiovasc Drugs Ther. 2006 Dec; 20(6):425-32. Honda HM, Ping P. PMID: 17171295.
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    91. Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Proteomics approaches to the systems biology of cardiovascular diseases. J Lipid Res. 2007 Jan; 48(1):1-8. Drake TA, Ping P. PMID: 17065662.
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    92. Protein degradation by the 26S proteasome system in the normal and stressed myocardium. Antioxid Redox Signal. 2006 Sep-Oct; 8(9-10):1677-91. Gomes AV, Zong C, Ping P. PMID: 16987021.
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    93. Regulation of murine cardiac 20S proteasomes: role of associating partners. Circ Res. 2006 Aug 18; 99(4):372-80. Zong C, Gomes AV, Drews O, Li X, Young GW, Berhane B, Qiao X, French SW, Bardag-Gorce F, Ping P. PMID: 16857963.
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    94. Mapping the murine cardiac 26S proteasome complexes. Circ Res. 2006 Aug 18; 99(4):362-71. Gomes AV, Zong C, Edmondson RD, Li X, Stefani E, Zhang J, Jones RC, Thyparambil S, Wang GW, Qiao X, Bardag-Gorce F, Ping P. PMID: 16857966.
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    95. Proteomics-based development of biomarkers in cardiovascular disease: mechanistic, clinical, and therapeutic insights. Mol Cell Proteomics. 2006 Oct; 5(10):1853-64. Mayr M, Zhang J, Greene AS, Gutterman D, Perloff J, Ping P. PMID: 16733263.
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    96. Cardiovascular-related proteins identified in human plasma by the HUPO Plasma Proteome Project pilot phase. Proteomics. 2005 Aug; 5(13):3520-30. Berhane BT, Zong C, Liem DA, Huang A, Le S, Edmondson RD, Jones RC, Qiao X, Whitelegge JP, Ping P, Vondriska TM. PMID: 16052623.
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    97. Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. Proteomics. 2005 Aug; 5(13):3226-45. Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, Aebersold R, Eng J, Hancock WS, Hefta SA, Meyer H, Paik YK, Yoo JS, Ping P, Pounds J, Adkins J, Qian X, Wang R, Wasinger V, Wu CY, Zhao X, Zeng R, Archakov A, Tsugita A, Beer I, Pandey A, Pisano M, Andrews P, Tammen H, Speicher DW, Hanash SM. PMID: 16104056.
      View in: PubMed   Mentions: 216     Fields:    Translation:Humans
    98. A functional annotation of subproteomes in human plasma. Proteomics. 2005 Aug; 5(13):3506-19. Ping P, Vondriska TM, Creighton CJ, Gandhi TK, Yang Z, Menon R, Kwon MS, Cho SY, Drwal G, Kellmann M, Peri S, Suresh S, Gronborg M, Molina H, Chaerkady R, Rekha B, Shet AS, Gerszten RE, Wu H, Raftery M, Wasinger V, Schulz-Knappe P, Hanash SM, Paik YK, Hancock WS, States DJ, Omenn GS, Pandey A. PMID: 16104058.
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    99. The murine cardiac 26S proteasome: an organelle awaiting exploration. Ann N Y Acad Sci. 2005 Jun; 1047:197-207. Gomes AV, Zong C, Edmondson RD, Berhane BT, Wang GW, Le S, Young G, Zhang J, Vondriska TM, Whitelegge JP, Jones RC, Joshua IG, Thyparambil S, Pantaleon D, Qiao J, Loo J, Ping P. PMID: 16093497.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    100. Nitric oxide donors protect murine myocardium against infarction via modulation of mitochondrial permeability transition. . 2005 Mar; 288(3):H1290-5. Wang G, Liem DA, Vondriska TM, Honda HM, Korge P, Pantaleon DM, Qiao X, Wang Y, Weiss JN, Ping P. PMID: 15528225.
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    101. Functional proteomic analysis of a three-tier PKCepsilon-Akt-eNOS signaling module in cardiac protection. . 2005 Feb; 288(2):H954-61. Zhang J, Baines CP, Zong C, Cardwell EM, Wang G, Vondriska TM, Ping P. PMID: 15528226.
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    102. Scaffold proteins and assembly of multiprotein signaling complexes. J Mol Cell Cardiol. 2004 Aug; 37(2):391-7. Vondriska TM, Pass JM, Ping P. PMID: 15276009.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    103. Bmx, a member of the Tec family of nonreceptor tyrosine kinases, is a novel participant in pharmacological cardioprotection. . 2004 Nov; 287(5):H2364-6. Zhang J, Ping P, Wang GW, Lu M, Pantaleon D, Tang XL, Bolli R, Vondriska TM. PMID: 15191890.
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    104. Identification of novel signaling complexes by functional proteomics. Circ Res. 2003 Oct 03; 93(7):595-603. Ping P. PMID: 14525921.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
    105. Multiprotein signaling complexes and regulation of cardiac phenotype. J Mol Cell Cardiol. 2003 Sep; 35(9):1027-33. Vondriska TM, Ping P. PMID: 12967625.
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    106. Role of the mitochondrial permeability transition in myocardial disease. Circ Res. 2003 Aug 22; 93(4):292-301. Weiss JN, Korge P, Honda HM, Ping P. PMID: 12933700.
      View in: PubMed   Mentions: 162     Fields:    Translation:HumansAnimalsCells
    107. Cardioprotection involves activation of NF-kappa B via PKC-dependent tyrosine and serine phosphorylation of I kappa B-alpha. . 2003 Oct; 285(4):H1753-8. Zhang J, Ping P, Vondriska TM, Tang XL, Wang GW, Cardwell EM, Bolli R. PMID: 12829431.
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    108. Functional proteomic analysis of the protein kinase C signaling system. Methods Mol Biol. 2003; 233:369-85. Pass JM, Zhang J, Vondriska TM, Ping P. PMID: 12840523.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    109. Cardiac toxic effects of trans-2-hexenal are mediated by induction of cardiomyocyte apoptotic pathways. Cardiovasc Toxicol. 2003; 3(4):341-51. Ping P, Baines CP, Gu Y, Prabhu SD, Zhang J, Tsai LL, Cardwell E, Zong NC, Vondriska TM, Korge P, Bhatnagar A, Wang GW. PMID: 14734831.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    110. Functional proteomics to study protection of the ischaemic myocardium. Expert Opin Ther Targets. 2002 Oct; 6(5):563-70. Vondriska TM, Ping P. PMID: 12387680.
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    111. Protein kinase C epsilon signaling complexes include metabolism- and transcription/translation-related proteins: complimentary separation techniques with LC/MS/MS. Mol Cell Proteomics. 2002 Jun; 1(6):421-33. Edmondson RD, Vondriska TM, Biederman KJ, Zhang J, Jones RC, Zheng Y, Allen DL, Xiu JX, Cardwell EM, Pisano MR, Ping P. PMID: 12169683.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansAnimalsCells
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