Omai B Garner

Title(s)Professor of Clinical , Pathology and Laboratory Medicine
SchoolMedicine
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    Collapse Overview
    Omai Garner, Ph.D., holds the Pritzker Family Endowed Term Chair in Pathology.

    Collapse Research 
    Collapse Research Activities and Funding
    Minority Predoctoral Fellowship Program
    NIH F31AI058916Apr 1, 2004 - Mar 31, 2008
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Diagnostic testing and laboratory equity in clinical microbiology. Microbiol Spectr. 2024 Jun 25; e0122224. Larkin PMK, Theel ES, Culbreath K, Garner OB, Vassell S, Kim W, She RC, Wesley Long S, Esther Babady N. PMID: 38916359.
      View in: PubMed   Mentions:    Fields:    
    2. Mpox Surveillance Based on Rash Characteristics - 13 Emergency Departments, United States, June-December 2023. MMWR Morb Mortal Wkly Rep. 2024 Jun 06; 73(22):507-513. Berdahl CT, Krishnadasan A, Pathmarajah K, Moran GJ, Torres JR, Waxman M, Mower W, Garner OB, Duvergne LP, Rimoin AW, Gorbach PM, Talan DA, EMERGEncy ID NET Study Group. PMID: 38843078; PMCID: PMC11166258.
      View in: PubMed   Mentions:    Fields:    Translation:HumansPHPublic Health
    3. HIV and COVID-19: two pandemics with significant (but different) central nervous system complications. Free Neuropathol. 2024 Jan; 5. Magaki S, Zhang T, Han K, Hilda M, Yong WH, Achim C, Fishbein G, Fishbein MC, Garner O, Salamon N, Williams CK, Valdes-Sueiras MA, Hsu JJ, Kelesidis T, Mathisen GE, Lavretsky H, Singer EJ, Vinters HV. PMID: 38469363; PMCID: PMC10925920.
      View in: PubMed   Mentions:
    4. Amphiphilic Particle-Stabilized Nanoliter Droplet Reactors with a Multimodal Portable Reader for Distributive Biomarker Quantification. ACS Nano. 2023 10 24; 17(20):19952-19960. Shah V, Yang X, Arnheim A, Udani S, Tseng D, Luo Y, Ouyang M, Destgeer G, Garner OB, Koydemir HC, Ozcan A, Di Carlo D. PMID: 37824510; PMCID: PMC10604076.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    5. Clinical Whole-Genome Sequencing Assay for Rapid Mycobacterium tuberculosis Complex First-Line Drug Susceptibility Testing and Phylogenetic Relatedness Analysis. Microorganisms. 2023 Oct 11; 11(10). Shaw B, von Bredow B, Tsan A, Garner O, Yang S. PMID: 37894195; PMCID: PMC10609454.
      View in: PubMed   Mentions: 1  
    6. FDA trial regulation of laboratory developed tests (LDTs): An academic medical center's experience with Mpox in-house testing. J Clin Virol. 2023 12; 169:105611. Caldera JR, Gray HK, Garner OB, Yang S. PMID: 37866092.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansPHPublic Health
    7. Single-tier point-of-care serodiagnosis of Lyme disease. bioRxiv. 2023 Jun 14. Ghosh R, Joung HA, Goncharov A, Palanisamy B, Ngo K, Pejcinovic K, Krockenberger N, Horn EJ, Garner OB, Ghazal E, O'Kula A, Arnaboldi PM, Dattwyler RJ, Ozcan A, Di Carlo D. PMID: 37398357; PMCID: PMC10312703.
      View in: PubMed   Mentions:
    8. Clinical next-generation sequencing assay combining full-length gene amplification and shotgun sequencing for the detection of CMV drug resistance mutations. J Clin Virol. 2023 08; 165:105520. von Bredow B, Caldera JR, Cerón S, Chan JL, Gray HK, Garner OB, Yang S. PMID: 37336174.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    9. Epidemiology and SARS-CoV-2 Infection Patterns among Youth Followed at a Large Los Angeles Health Network during 2020-2022: Clinical Presentation, Prevalent Strains, and Correlates of Disease Severity. Vaccines (Basel). 2023 May 25; 11(6). Saleh T, Fuller T, Cambou MC, Segura ER, Kamau E, Yang S, Garner OB, Nielsen-Saines K. PMID: 37376413; PMCID: PMC10300956.
      View in: PubMed   Mentions: 1  
    10. Deep Learning-Enabled Multiplexed Point-of-Care Sensor using a Paper-Based Fluorescence Vertical Flow Assay. Small. 2023 Dec; 19(51):e2300617. Goncharov A, Joung HA, Ghosh R, Han GR, Ballard ZS, Maloney Q, Bell A, Aung CTZ, Garner OB, Carlo DD, Ozcan A. PMID: 37104829.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    11. Accurate subspecies-level identification of clinically significant Mycobacterium avium and Mycobacterium intracellulare by whole-genome sequencing. J Microbiol Methods. 2023 05; 208:106726. Chawla R, Shaw B, von Bredow B, Chong C, Garner OB, Zangwill KM, Yang S. PMID: 37120137.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    12. Using an Antibiogram Profile to Improve Infection Control and Rational Antimicrobial Therapy in an Urban Hospital in The Gambia, Strategies and Lessons for Low- and Middle-Income Countries. Antibiotics (Basel). 2023 Apr 21; 12(4). Darboe S, Mirasol R, Adejuyigbe B, Muhammad AK, Nadjm B, De St Maurice A, Dogan TL, Ceesay B, Umukoro S, Okomo U, Nwakanma D, Roca A, Secka O, Forrest K, Garner OB. PMID: 37107152; PMCID: PMC10135392.
      View in: PubMed   Mentions: 1  
    13. Real-world utilization of SARS-CoV-2 serological testing in RNA positive patients across the United States. PLoS One. 2023; 18(2):e0281365. Rodriguez-Watson CV, Sheils NE, Louder AM, Eldridge EH, Lin ND, Pollock BD, Gatz JL, Grannis SJ, Vashisht R, Ghauri K, Valo G, Chakravarty AG, Lasky T, Jung M, Lovell SL, Major JM, Kabelac C, Knepper C, Leonard S, Embi PJ, Jenkinson WG, Klesh R, Garner OB, Patel A, Dahm L, Barin A, Cooper DM, Andriola T, Byington CL, Crews BO, Butte AJ, Allen J. PMID: 36763574; PMCID: PMC9916659.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCellsPHPublic Health
    14. Real-world performance of SARS-Cov-2 serology tests in the United States, 2020. PLoS One. 2023; 18(2):e0279956. Rodriguez-Watson CV, Louder AM, Kabelac C, Frederick CM, Sheils NE, Eldridge EH, Lin ND, Pollock BD, Gatz JL, Grannis SJ, Vashisht R, Ghauri K, Knepper C, Leonard S, Embi PJ, Jenkinson G, Klesh R, Garner OB, Patel A, Dahm L, Barin A, Cooper DM, Andriola T, Byington CL, Crews BO, Butte AJ, Allen J. PMID: 36735683; PMCID: PMC9897562.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    15. Correction: An amplification-free, 16S rRNA test for Neisseria gonorrhoeae in urine. Sens Diagn. 2023 Mar 17; 2(2):468. Zheng Z, Cao Y, Chandrasekaran S, Schmidt JJ, Garner OB, Monbouquette HG. PMID: 36942047; PMCID: PMC10021480.
      View in: PubMed   Mentions:
    16. Fungal Whole-Genome Sequencing for Species Identification: From Test Development to Clinical Utilization. J Fungi (Basel). 2023 Jan 29; 9(2). Salem-Bango Z, Price TK, Chan JL, Chandrasekaran S, Garner OB, Yang S. PMID: 36836298; PMCID: PMC9965959.
      View in: PubMed   Mentions: 6  
    17. On variants and vaccines: The effectiveness of Covid-19 monoclonal antibody therapy during two distinct periods in the pandemic. PLoS One. 2022; 17(12):e0278394. Srinivasan V, Weinstein SE, Bhimani A, Clemons NC, Dinolfo M, Shin CS, Grier J, Lopez A, Braggs J, Boucher J, Batiste QN, Garner OB, Yang S, Vijayan T. PMID: 36454767.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCellsPHPublic Health
    18. Genetic Predictive Factors for Nonsusceptible Phenotypes and Multidrug Resistance in Expanded-Spectrum Cephalosporin-Resistant Uropathogenic Escherichia coli from a Multicenter Cohort: Insights into the Phenotypic and Genetic Basis of Coresistance. mSphere. 2022 12 21; 7(6):e0047122. Jackson N, Belmont CR, Tarlton NJ, Allegretti YH, Adams-Sapper S, Huang YY, Borges CA, Frazee BW, Florence-Petrovic D, Hufana C, Parker A, Mastrangelo CF, Awasthi S, Kane I, Coralic Z, Miller S, Diaz J, Fee C, Bittencourt CE, Garner O, Chandrasekaran S, Crandall C, Marcha JC, Noorbakhsh MH, Rodrigues-Wong P, deBoer TR, Riley LW. PMID: 36377882; PMCID: PMC9769571.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    19. Case Report: Symptomatic Herpes Simplex Virus Type 2 and Monkeypox Coinfection in an Adult Male. Am J Trop Med Hyg. 2022 12 14; 107(6):1258-1260. Prabaker KK, de St Maurice A, Uslan DZ, Yen GC, Manavi S, Gray HK, Caldera JR, Chan JL, Garner OB, Yang S. PMID: 36375467; PMCID: PMC9768272.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    20. An amplification-free, 16S rRNA test for Neisseria gonorrhoeae in urine. Sens Diagn. 2023 Jan 19; 2(1):163-167. Zheng Z, Cao Y, Chandrasekaran S, Schmidt JJ, Garner OB, Monbouquette HG. PMID: 36741249; PMCID: PMC9850355.
      View in: PubMed   Mentions:
    21. Ferrobotic swarms enable accessible and adaptable automated viral testing. Nature. 2022 11; 611(7936):570-577. Lin H, Yu W, A Sabet K, Bogumil M, Zhao Y, Hambalek J, Lin S, Chandrasekaran S, Garner O, Di Carlo D, Emaminejad S. PMID: 36352231; PMCID: PMC9645323.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCellsPHPublic Health
    22. Prevalence and Factors Associated With Antigen Test Positivity Following SARS-CoV-2 Infection Among Health Care Workers in Los Angeles. Open Forum Infect Dis. 2022 Oct; 9(10):ofac462. Adamson PC, Currier JS, Uslan DZ, Garner OB. PMID: 36285175; PMCID: PMC9581505.
      View in: PubMed   Mentions: 1  
    23. Clinical and genomic characterization of hypervirulent Klebsiella pneumoniae (hvKp) infections via passive surveillance in Southern California, 2020-2022. Front Microbiol. 2022; 13:1001169. Kamau E, Ranson EL, Tsan AT, Bergmann-Leitner ES, Garner OB, Yang S. PMID: 36312975; PMCID: PMC9614223.
      View in: PubMed   Mentions: 5  
    24. Clinical, microbiological, and genomic characteristics of clade-III Candida auris colonization and infection in southern California, 2019-2022. Infect Control Hosp Epidemiol. 2023 Jul; 44(7):1093-1101. de St Maurice A, Parti U, Anikst VE, Harper T, Mirasol R, Dayo AJ, Garner OB, Prabaker KK, Yang S. PMID: 36052507; PMCID: PMC10369217.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimals
    25. Clinical and epidemiological characteristics of SARS-CoV-2 Infection in Los Angeles County youth during the first year of the pandemic. Int J Infect Dis. 2022 Sep; 122:514-520. Saleh T, Kerin T, Fuller T, Paiola S, Cambou MC, Motwani Y, Newhouse CN, Yang S, Kamau E, Garner OB, Chandrasekaran S, Nielsen-Saines K. PMID: 35803467; PMCID: PMC9259006.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCellsPHPublic Health
    26. Investigation of SARS-CoV-2 Epsilon Variant and Hospitalization Status by Genomic Surveillance in a Single Large Health System During the 2020-2021 Winter Surge in Southern California. Am J Clin Pathol. 2022 05 04; 157(5):649-652. Yang S, Hemarajata P, Hilt EE, Price TK, Garner OB, Green NM. PMID: 34875004; PMCID: PMC8689746.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    27. Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA. BMC Genomics. 2022 Apr 04; 23(1):260. Guo L, Boocock J, Hilt EE, Chandrasekaran S, Zhang Y, Munugala C, Sathe L, Alexander N, Arboleda VA, Flint J, Eskin E, Luo C, Yang S, Garner OB, Yin Y, Bloom JS, Kruglyak L. PMID: 35379194; PMCID: PMC8978495.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCellsPHPublic Health
    28. Case Report and Genomic Analysis of Cefiderocol-Resistant Escherichia coli Clinical Isolates. Am J Clin Pathol. 2022 Feb 03; 157(2):257-265. Price TK, Davar K, Contreras D, Ward KW, Garner OB, Simner PJ, Yang S, Chandrasekaran S. PMID: 34542575.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    29. Retrospective Detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Symptomatic Patients Prior to Widespread Diagnostic Testing in Southern California. Clin Infect Dis. 2022 01 29; 74(2):271-277. Hilt EE, Boocock J, Trejo M, Le CQ, Guo L, Zhang Y, Sathe L, Arboleda VA, Yin Y, Bloom JS, Wang PC, Elmore JG, Kruglyak L, Shrestha L, Bakhash SAM, Lin M, Xie H, Huang ML, Roychoudhury P, Greninger A, Chandrasekaran S, Yang S, Garner OB. PMID: 33939799; PMCID: PMC8135745.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    30. At-Home Testing for Infectious Diseases: The Laboratory Where You Live. Clin Chem. 2021 12 30; 68(1):19-26. Jean S, Burnham CD, Chapin K, Garner OB, Pant Pai N, Turabelidze G, Butler-Wu S. PMID: 34969103.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    31. The Path of More Resistance: a Comparison of National Healthcare Safety Network and Clinical Laboratory Standards Institute Criteria in Developing Cumulative Antimicrobial Susceptibility Test Reports and Institutional Antibiograms. J Clin Microbiol. 2022 02 16; 60(2):e0136621. Viloria Winnett A, Srinivasan V, Davis M, Vijayan T, Uslan DZ, Garner OB, de St Maurice A. PMID: 34851679; PMCID: PMC8849356.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    32. Lower Severe Acute Respiratory Syndrome Coronavirus 2 Viral Shedding Following Coronavirus Disease 2019 Vaccination Among Healthcare Workers in Los Angeles, California. Open Forum Infect Dis. 2021 Nov; 8(11):ofab526. Adamson PC, Pfeffer MA, Arboleda VA, Garner OB, de St Maurice A, von Bredow B, Flint J, Kruglyak L, Currier JS. PMID: 35005055; PMCID: PMC8689969.
      View in: PubMed   Mentions: 2  
    33. Predictors of SARS-CoV-2 Infection in Youth at a Large, Urban Healthcare Center in California, March-September 2020. Front Pediatr. 2021; 9:752247. Newhouse CN, Saleh T, Fuller T, Kerin T, Cambou MC, Swayze EJ, Le C, Seo W, Trejo M, Garner OB, Chandrasekaran S, Nielsen-Saines K. PMID: 34869107; PMCID: PMC8635702.
      View in: PubMed   Mentions: 3  
    34. Multicenter Clinical Evaluation of Vitek 2 Meropenem-Vaborbactam for Susceptibility Testing of Enterobacterales and Pseudomonas aeruginosa. J Clin Microbiol. 2022 01 19; 60(1):e0161021. Dwivedi HP, Franklin S, Chandrasekaran S, Garner O, Traczewski MM, Beasley D, Procop GW, Tuohy M, Wilson D, Bala Y, Pincus DH. PMID: 34705536; PMCID: PMC8769728.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    35. The systemic inflammatory landscape of COVID-19 in pregnancy: Extensive serum proteomic profiling of mother-infant dyads with in utero SARS-CoV-2. Cell Rep Med. 2021 11 16; 2(11):100453. Foo SS, Cambou MC, Mok T, Fajardo VM, Jung KL, Fuller T, Chen W, Kerin T, Mei J, Bhattacharya D, Choi Y, Wu X, Xia T, Shin WJ, Cranston J, Aldrovandi G, Tobin N, Contreras D, Ibarrondo FJ, Yang O, Yang S, Garner O, Cortado R, Bryson Y, Janzen C, Ghosh S, Devaskar S, Asilnejad B, Moreira ME, Vasconcelos Z, Soni PR, Gibson LC, Brasil P, Comhair SAA, Arumugaswami V, Erzurum SC, Rao R, Jung JU, Nielsen-Saines K. PMID: 34723226; PMCID: PMC8549189.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
    36. Infectious Keratitis Isolates and Susceptibility in Southern California. Cornea. 2022 Sep 01; 41(9):1094-1102. Gupta K, Unhale R, Garner OB, Deng SX, M Fung SS. PMID: 35315617.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    37. Utilization of whole genome sequencing for resolution of discrepant Mycobacterium tuberculosis drug susceptibility results: A case report. IDCases. 2021; 26:e01308. Realegeno S, Adeyiga O, Winston DJ, Beaird OE, Garner OB, Yang S. PMID: 34745885; PMCID: PMC8551521.
      View in: PubMed   Mentions: 1  
    38. Quantitative particle agglutination assay for point-of-care testing using mobile holographic imaging and deep learning. Lab Chip. 2021 09 14; 21(18):3550-3558. Luo Y, Joung HA, Esparza S, Rao J, Garner O, Ozcan A. PMID: 34292287.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    39. Clinical Whole Genome Sequencing for Clarithromycin and Amikacin Resistance Prediction and Subspecies Identification of Mycobacterium abscessus. J Mol Diagn. 2021 11; 23(11):1460-1467. Realegeno S, Mirasol R, Garner OB, Yang S. PMID: 34454109.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    40. Recent Progress in Lyme Disease and Remaining Challenges. Front Med (Lausanne). 2021; 8:666554. Bobe JR, Jutras BL, Horn EJ, Embers ME, Bailey A, Moritz RL, Zhang Y, Soloski MJ, Ostfeld RS, Marconi RT, Aucott J, Ma'ayan A, Keesing F, Lewis K, Ben Mamoun C, Rebman AW, McClune ME, Breitschwerdt EB, Reddy PJ, Maggi R, Yang F, Nemser B, Ozcan A, Garner O, Di Carlo D, Ballard Z, Joung HA, Garcia-Romeu A, Griffiths RR, Baumgarth N, Fallon BA. PMID: 34485323; PMCID: PMC8416313.
      View in: PubMed   Mentions: 45  
    41. Validation, Implementation, and Clinical Utility of Whole Genome Sequence-Based Bacterial Identification in the Clinical Microbiology Laboratory. J Mol Diagn. 2021 11; 23(11):1468-1477. Price TK, Realegeno S, Mirasol R, Tsan A, Chandrasekaran S, Garner OB, Yang S. PMID: 34384892.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCellsPHPublic Health
    42. Catabacter hongkongensis bacteremia identified by direct metagenomic sequencing of positive blood culture fluid, first case report in the US. Anaerobe. 2021 Oct; 71:102421. Kamau E, Maliksi E, Kwan N, Garner OB, Yang S. PMID: 34314867.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    43. Current Testing Strategies for SARS-CoV-2 in the United States. Clin Chem. 2021 07 06; 67(7):935-940. Cervinski MA, Parnas ML, Buxton BP, Choi J, Garner O, Neath SX, Zreloff JL. PMID: 33822921; PMCID: PMC8083522.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    44. Development and validation of a quantitative, non-invasive, highly sensitive and specific, electrochemical assay for anti-SARS-CoV-2 IgG antibodies in saliva. PLoS One. 2021; 16(7):e0251342. Chiang SH, Tu M, Cheng J, Wei F, Li F, Chia D, Garner O, Chandrasekaran S, Bender R, Strom CM, Wong DTW. PMID: 34197468; PMCID: PMC8248704.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    45. Randomized Trial Evaluating Clinical Impact of RAPid IDentification and Susceptibility Testing for Gram-negative Bacteremia: RAPIDS-GN. Clin Infect Dis. 2021 07 01; 73(1):e39-e46. Banerjee R, Komarow L, Virk A, Rajapakse N, Schuetz AN, Dylla B, Earley M, Lok J, Kohner P, Ihde S, Cole N, Hines L, Reed K, Garner OB, Chandrasekaran S, de St Maurice A, Kanatani M, Curello J, Arias R, Swearingen W, Doernberg SB, Patel R. PMID: 32374822; PMCID: PMC8246790.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansCells
    46. Massively scaled-up testing for SARS-CoV-2 RNA via next-generation sequencing of pooled and barcoded nasal and saliva samples. Nat Biomed Eng. 2021 07; 5(7):657-665. Bloom JS, Sathe L, Munugala C, Jones EM, Gasperini M, Lubock NB, Yarza F, Thompson EM, Kovary KM, Park J, Marquette D, Kay S, Lucas M, Love T, Sina Booeshaghi A, Brandenberg OF, Guo L, Boocock J, Hochman M, Simpkins SW, Lin I, LaPierre N, Hong D, Zhang Y, Oland G, Choe BJ, Chandrasekaran S, Hilt EE, Butte MJ, Damoiseaux R, Kravit C, Cooper AR, Yin Y, Pachter L, Garner OB, Flint J, Eskin E, Luo C, Kosuri S, Kruglyak L, Arboleda VA. PMID: 34211145; PMCID: PMC10810734.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    47. SARS-CoV-2 Infection Detection by PCR and Serologic Testing in Clinical Practice. J Clin Microbiol. 2021 06 18; 59(7):e0043121. Murad D, Chandrasekaran S, Pillai A, Garner OB, Denny CT. PMID: 33903168; PMCID: PMC8218740.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    48. Deceiving Phenotypic Susceptibility Results on a Klebsiella pneumoniae Blood Isolate Carrying Plasmid-Mediated AmpC Gene blaDHA-1. Front Cell Infect Microbiol. 2021; 11:561880. Realegeno S, Ward K, Garner OB, Yang S. PMID: 33791229; PMCID: PMC8006929.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    49. Swab-Seq: A high-throughput platform for massively scaled up SARS-CoV-2 testing. medRxiv. 2021 Mar 09. Bloom JS, Sathe L, Munugala C, Jones EM, Gasperini M, Lubock NB, Yarza F, Thompson EM, Kovary KM, Park J, Marquette D, Kay S, Lucas M, Love T, Booeshaghi AS, Brandenberg OF, Guo L, Boocock J, Hochman M, Simpkins SW, Lin I, LaPierre N, Hong D, Zhang Y, Oland G, Choe BJ, Chandrasekaran S, Hilt EE, Butte MJ, Damoiseaux R, Kravit C, Cooper AR, Yin Y, Pachter L, Garner OB, Flint J, Eskin E, Luo C, Kosuri S, Kruglyak L, Arboleda VA. PMID: 32909008; PMCID: PMC7480060.
      View in: PubMed   Mentions: 2  
    50. Investigation of Phylogeny and Drug Resistance Mechanisms of Elizabethkingia anophelis Isolated from Blood and Lower Respiratory Tract. Microb Drug Resist. 2021 Sep; 27(9):1259-1264. Larkin PMK, Mortimer L, Malenfant JH, Gaynor P, Contreras DA, Garner OB, Yang S, Allyn P. PMID: 33656389.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    51. Clinical and Epidemiologic Evaluation of Inconclusive COVID-19 PCR Results Using a Quantitative Algorithm. Am J Clin Pathol. 2021 Feb 11; 155(3):376-380. Yang S, Stanzione N, Uslan DZ, Garner OB, de St Maurice A. PMID: 33274731; PMCID: PMC7799210.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    52. Age- and Sex-Associated Variations in the Sensitivity of Serological Tests Among Individuals Infected With SARS-CoV-2. JAMA Netw Open. 2021 02 01; 4(2):e210337. Vashisht R, Patel A, Crews BO, Garner OB, Dahm L, Wilson C, Butte AJ. PMID: 33576815; PMCID: PMC7881354.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    53. Clinical Impact of Metagenomic Next-Generation Sequencing of Plasma Cell-Free DNA for the Diagnosis of Infectious Diseases: A Multicenter Retrospective Cohort Study. Clin Infect Dis. 2021 01 27; 72(2):239-245. Hogan CA, Yang S, Garner OB, Green DA, Gomez CA, Dien Bard J, Pinsky BA, Banaei N. PMID: 31942944.
      View in: PubMed   Mentions: 89     Fields:    Translation:Humans
    54. Endogenous Endophthalmitis Caused by ST66-K2 Hypervirulent Klebsiella pneumoniae, United States. Emerg Infect Dis. 2021; 27(8):2215-2218. Kamau E, Allyn PR, Beaird OE, Ward KW, Kwan N, Garner OB, Yang S. PMID: 34287130; PMCID: PMC8314818.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    55. Genomic Characterizations of Clade III Lineage of Candida auris, California, USA. Emerg Infect Dis. 2021; 27(4):1223-1227. Price TK, Mirasol R, Ward KW, Dayo AJ, Hilt EE, Chandrasekaran S, Garner OB, de St Maurice A, Yang S. PMID: 33755003; PMCID: PMC8007294.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimals
    56. Performance Characteristics of Severe Acute Respiratory Syndrome Coronavirus 2 RT-PCR Tests in a Single Health System: Analysis of >10,000 Results from Three Different Assays. J Mol Diagn. 2021 02; 23(2):159-163. Price TK, Bowland BC, Chandrasekaran S, Garner OB, Yang S. PMID: 33285286; PMCID: PMC7718779.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    57. Novel Use of Rapid Antigen Influenza Testing in the Outpatient Setting To Provide an Early Warning Sign of Influenza Activity in the Emergency Departments of an Integrated Health System. J Clin Microbiol. 2020 11 18; 58(12). Larkin PMK, Manuel V, Hernandez N, Garner OB. PMID: 32967898; PMCID: PMC7685900.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    58. Development and validation of a highly sensitive and specific electrochemical assay to quantify anti-SARS-CoV-2 IgG antibodies to facilitate pandemic surveillance and monitoring of vaccine response. medRxiv. 2020 Nov 16. Chiang SH, Tu M, Cheng J, Wei F, Li F, Chia D, Garner O, Chandrasekaran S, Bender R, Strom CM, Wong DTW. PMID: 33236034; PMCID: PMC7685352.
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    59. Carbapenem Resistant Aeromonas hydrophila Carrying blacphA7 Isolated From Two Solid Organ Transplant Patients. Front Cell Infect Microbiol. 2020; 10:563482. Hilt EE, Fitzwater SP, Ward K, de St Maurice A, Chandrasekaran S, Garner OB, Yang S. PMID: 33194801; PMCID: PMC7649429.
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    60. Prospective clinical validation of 3D printed nasopharyngeal swabs for diagnosis of COVID-19. Diagn Microbiol Infect Dis. 2021 Mar; 99(3):115257. Oland G, Garner O, de St Maurice A. PMID: 33220640; PMCID: PMC7577894.
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    61. Diagnostic yield of repeat testing for SARS-CoV-2: Experience from a large health system in Los Angeles. Int J Infect Dis. 2020 Nov; 100:298-301. Adamson PC, Goodman-Meza D, Vijayan T, Yang S, Garner OB. PMID: 32835787; PMCID: PMC7441934.
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    62. Low prevalence (0.13%) of COVID-19 infection in asymptomatic pre-operative/pre-procedure patients at a large, academic medical center informs approaches to perioperative care. Surgery. 2020 12; 168(6):980-986. Singer JS, Cheng EM, Murad DA, de St Maurice A, Hines OJ, Uslan DZ, Garner O, Pregler J, Bukata SV, Pfeffer MA, Cherry RA. PMID: 33008615; PMCID: PMC7427530.
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    63. Unusual presentation of meningococcal meningitis in the elderly and utility of CSF PCR testing. Access Microbiol. 2020; 2(10):acmi000158. Ranson E, Ship H, Garner O, Yang S, Bhattacharya D. PMID: 33195972; PMCID: PMC7660242.
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    64. Amplicon-Based Next-Generation Sequencing for Detection of Fungi in Formalin-Fixed, Paraffin-Embedded Tissues: Correlation with Histopathology and Clinical Applications. J Mol Diagn. 2020 10; 22(10):1287-1293. Larkin PMK, Lawson KL, Contreras DA, Le CQ, Trejo M, Realegeno S, Hilt EE, Chandrasekaran S, Garner OB, Fishbein GA, Yang S. PMID: 32738297.
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    65. Deep learning-enabled point-of-care sensing using multiplexed paper-based sensors. NPJ Digit Med. 2020; 3:66. Ballard ZS, Joung HA, Goncharov A, Liang J, Nugroho K, Di Carlo D, Garner OB, Ozcan A. PMID: 32411827; PMCID: PMC7206101.
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    66. An Unusual Carbapenem Resistant Escherichia coli Carrying Plasmid-mediated AmpC and Mutated ompC in A Patient with Recurrent Urinary Tract Infections. IDCases. 2020; 20:e00781. Larkin PMK, Realegeno S, Ward KW, Garner OB, Yang S. PMID: 32420029; PMCID: PMC7215173.
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    67. Noninterruptive Clinical Decision Support Decreases Ordering of Respiratory Viral Panels during Influenza Season. Appl Clin Inform. 2020 03; 11(2):315-322. Escovedo C, Bell D, Cheng E, Garner O, Ziman A, Vangala S, Gounder P, Lerner C. PMID: 32349143; PMCID: PMC7190391.
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    68. Coinfections of Two Strains of NDM-1- and OXA-232-Coproducing Klebsiella pneumoniae in a Kidney Transplant Patient. Antimicrob Agents Chemother. 2020 03 24; 64(4). Contreras DA, Fitzwater SP, Nanayakkara DD, Schaenman J, Aldrovandi GM, Garner OB, Yang S. PMID: 31527031; PMCID: PMC7179284.
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    69. Differential DNA accessibility to polymerase enables 30-minute phenotypic β-lactam antibiotic susceptibility testing of carbapenem-resistant Enterobacteriaceae. PLoS Biol. 2020 03; 18(3):e3000652. Schoepp NG, Liaw EJ, Winnett A, Savela ES, Garner OB, Ismagilov RF. PMID: 32191697; PMCID: PMC7081982.
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    70. Molecular and clinical epidemiology of carbapenem-resistant Enterobacterales in the USA (CRACKLE-2): a prospective cohort study. Lancet Infect Dis. 2020 06; 20(6):731-741. van Duin D, Arias CA, Komarow L, Chen L, Hanson BM, Weston G, Cober E, Garner OB, Jacob JT, Satlin MJ, Fries BC, Garcia-Diaz J, Doi Y, Dhar S, Kaye KS, Earley M, Hujer AM, Hujer KM, Domitrovic TN, Shropshire WC, Dinh A, Manca C, Luterbach CL, Wang M, Paterson DL, Banerjee R, Patel R, Evans S, Hill C, Arias R, Chambers HF, Fowler VG, Kreiswirth BN, Bonomo RA, Multi-Drug Resistant Organism Network Investigators. PMID: 32151332; PMCID: PMC7473597.
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    71. Fractal LAMP: Label-Free Analysis of Fractal Precipitate for Digital Loop-Mediated Isothermal Nucleic Acid Amplification. ACS Sens. 2020 02 28; 5(2):385-394. Muñoz HE, Riche CT, Kong JE, van Zee M, Garner OB, Ozcan A, Di Carlo D. PMID: 31902202.
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    72. Multicenter Clinical Evaluation of Etest Meropenem-Vaborbactam (bioMérieux) for Susceptibility Testing of Enterobacterales (Enterobacteriaceae) and Pseudomonas aeruginosa. J Clin Microbiol. 2019 12 23; 58(1). Jean S, Garrett S, Anglade C, Bridon L, Davies L, Garner OB, Richards J, Wallace M, Wootton M, Burnham CA. PMID: 31619532; PMCID: PMC6935911.
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    73. Point-of-Care Serodiagnostic Test for Early-Stage Lyme Disease Using a Multiplexed Paper-Based Immunoassay and Machine Learning. ACS Nano. 2020 01 28; 14(1):229-240. Joung HA, Ballard ZS, Wu J, Tseng DK, Teshome H, Zhang L, Horn EJ, Arnaboldi PM, Dattwyler RJ, Garner OB, Di Carlo D, Ozcan A. PMID: 31849225.
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    74. Factors associated with repeat rectal Neisseria gonorrhoeae and Chlamydia trachomatis screening following inconclusive nucleic acid amplification testing: A potential missed opportunity for screening. PLoS One. 2019; 14(12):e0226413. Blair CS, Garner OB, Pedone B, Elias S, Comulada WS, Landovitz RJ. PMID: 31830129; PMCID: PMC6907836.
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    75. Computational cytometer based on magnetically modulated coherent imaging and deep learning. Light Sci Appl. 2019; 8:91. Zhang Y, Ouyang M, Ray A, Liu T, Kong J, Bai B, Kim D, Guziak A, Luo Y, Feizi A, Tsai K, Duan Z, Liu X, Kim D, Cheung C, Yalcin S, Ceylan Koydemir H, Garner OB, Di Carlo D, Ozcan A. PMID: 31645935; PMCID: PMC6804677.
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    76. Validation and Retrospective Clinical Evaluation of a Quantitative 16S rRNA Gene Metagenomic Sequencing Assay for Bacterial Pathogen Detection in Body Fluids. J Mol Diagn. 2019 09; 21(5):913-923. Culbreath K, Melanson S, Gale J, Baker J, Li F, Saebo O, Kommedal O, Contreras D, Garner OB, Yang S. PMID: 31229651.
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    77. Paper-based multiplexed vertical flow assay for point-of-care testing. Lab Chip. 2019 03 13; 19(6):1027-1034. Joung HA, Ballard ZS, Ma A, Tseng DK, Teshome H, Burakowski S, Garner OB, Di Carlo D, Ozcan A. PMID: 30729974.
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    78. A Multi-Level Fit-Based Quality Improvement Initiative to Improve Colorectal Cancer Screening in a Managed Care Population. Clin Transl Gastroenterol. 2018 09 04; 9(8):177. Yu C, Skootsky S, Grossman M, Garner OB, Betlachin A, Esrailian E, Hommes DW, May FP. PMID: 30177700; PMCID: PMC6120887.
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    79. Ferrodrop Dose-Optimized Digital Quantification of Biomolecules in Low-Volume Samples. Anal Chem. 2018 08 07; 90(15):8881-8888. Kahkeshani S, Kong JE, Wei Q, Tseng D, Garner OB, Ozcan A, Di Carlo D. PMID: 30004217.
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    80. Enzyme-Free Nucleic Acid Amplification Assay Using a Cellphone-Based Well Plate Fluorescence Reader. Anal Chem. 2018 01 02; 90(1):690-695. Kim D, Wei Q, Kim DH, Tseng D, Zhang J, Pan E, Garner O, Ozcan A, Di Carlo D. PMID: 29136461.
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    81. Ensuring the Quality of Point-of-Care Testing in a Large and Decentralized Ambulatory Care Setting. Am J Clin Pathol. 2017 Oct 01; 148(4):336-344. Arboleda VA, Garner OB. PMID: 28967953.
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    82. Clinical Comparison of the NOWDiagnostics' ADEXUSDx Human Chorionic Gonadotropin Point-of-Care Test with the Roche Elecsys hCG + β2 for the Serum Measurement of Human Chorionic Gonadotropin. J Appl Lab Med. 2017 Sep 01; 2(2):234-237. Ramos E, Garner OB. PMID: 32630983.
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    83. Highly Stable and Sensitive Nucleic Acid Amplification and Cell-Phone-Based Readout. ACS Nano. 2017 03 28; 11(3):2934-2943. Kong JE, Wei Q, Tseng D, Zhang J, Pan E, Lewinski M, Garner OB, Ozcan A, Di Carlo D. PMID: 28234452.
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    84. High-throughput and automated diagnosis of antimicrobial resistance using a cost-effective cellphone-based micro-plate reader. Sci Rep. 2016 12 15; 6:39203. Feng S, Tseng D, Di Carlo D, Garner OB, Ozcan A. PMID: 27976700; PMCID: PMC5156953.
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    85. Homogeneous Entropy-Driven Amplified Detection of Biomolecular Interactions. ACS Nano. 2016 08 23; 10(8):7467-75. Kim D, Garner OB, Ozcan A, Di Carlo D. PMID: 27462995.
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    86. Microbial recovery from clot-activating Vacutainers®. Diagn Microbiol Infect Dis. 2016 Aug; 85(4):395-7. Yang S, McHardy IH, Hemarajata P, Wu MT, Garner OB. PMID: 27306117.
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    87. Cellphone-Based Hand-Held Microplate Reader for Point-of-Care Testing of Enzyme-Linked Immunosorbent Assays. ACS Nano. 2015 Aug 25; 9(8):7857-66. Berg B, Cortazar B, Tseng D, Ozkan H, Feng S, Wei Q, Chan RY, Burbano J, Farooqui Q, Lewinski M, Di Carlo D, Garner OB, Ozcan A. PMID: 26159546.
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    88. Assessment of Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Bacterial and Yeast Identification. J Clin Microbiol. 2015 Jul; 53(7):2349-52. Westblade LF, Garner OB, MacDonald K, Bradford C, Pincus DH, Mochon AB, Jennemann R, Manji R, Bythrow M, Lewinski MA, Burnham CA, Ginocchio CC. PMID: 25926486; PMCID: PMC4473194.
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    89. Timing of galectin-1 exposure differentially modulates Nipah virus entry and syncytium formation in endothelial cells. J Virol. 2015 Mar; 89(5):2520-9. Garner OB, Yun T, Pernet O, Aguilar HC, Park A, Bowden TA, Freiberg AN, Lee B, Baum LG. PMID: 25505064; PMCID: PMC4325760.
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    90. Comparison of the Vitek MS and Bruker Microflex LT MALDI-TOF MS platforms for routine identification of commonly isolated bacteria and yeast in the clinical microbiology laboratory. Diagn Microbiol Infect Dis. 2015 Jan; 81(1):27-33. Deak E, Charlton CL, Bobenchik AM, Miller SA, Pollett S, McHardy IH, Wu MT, Garner OB. PMID: 25446889.
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    91. Relative EBV antibody concentrations and cost of standard IVIG and CMV-IVIG for PTLD prophylaxis in solid organ transplant patients. Pediatr Transplant. 2014 Sep; 18(6):599-601. Ramirez-Avila L, Garner OB, Cherry JD. PMID: 25041939.
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    92. Detection of human viral pathogens: conventional versus molecular approaches. MLO Med Lab Obs. 2014 Jul; 46(7):8, 10-2; quiz 14. Wu MT, Garner OB. PMID: 25158395.
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    93. Microbe-Host Interactions are Positively and Negatively Regulated by Galectin-Glycan Interactions. Front Immunol. 2014; 5:284. Baum LG, Garner OB, Schaefer K, Lee B. PMID: 24995007; PMCID: PMC4061488.
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    94. Multicenter validation of the VITEK MS v2.0 MALDI-TOF mass spectrometry system for the identification of fastidious gram-negative bacteria. Diagn Microbiol Infect Dis. 2014 Feb; 78(2):129-31. Branda JA, Rychert J, Burnham CA, Bythrow M, Garner OB, Ginocchio CC, Jennemann R, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Sercia LF, Westblade LF, Ferraro MJ. PMID: 24321357.
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    95. Reply to "risks of 'blind' automated identification systems in medical microbiology". J Clin Microbiol. 2013 Nov; 51(11):3912. Westblade LF, Jennemann R, Branda JA, Bythrow M, Ferraro MJ, Garner OB, Ginocchio CC, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Rychert JA, Sercia L, Burnham CA. PMID: 24133054; PMCID: PMC3889801.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimals
    96. Multi-center evaluation of the VITEK® MS system for mass spectrometric identification of non-Enterobacteriaceae Gram-negative bacilli. Eur J Clin Microbiol Infect Dis. 2014 Mar; 33(3):337-46. Manji R, Bythrow M, Branda JA, Burnham CA, Ferraro MJ, Garner OB, Jennemann R, Lewinski MA, Mochon AB, Procop GW, Richter SS, Rychert JA, Sercia L, Westblade LF, Ginocchio CC. PMID: 24019163.
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    97. Multi-centre evaluation of mass spectrometric identification of anaerobic bacteria using the VITEK® MS system. Clin Microbiol Infect. 2014 Apr; 20(4):335-9. Garner O, Mochon A, Branda J, Burnham CA, Bythrow M, Ferraro M, Ginocchio C, Jennemann R, Manji R, Procop GW, Richter S, Rychert J, Sercia L, Westblade L, Lewinski M. PMID: 23927597.
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    98. Identification of Enterobacteriaceae by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry using the VITEK MS system. Eur J Clin Microbiol Infect Dis. 2013 Dec; 32(12):1571-8. Richter SS, Sercia L, Branda JA, Burnham CA, Bythrow M, Ferraro MJ, Garner OB, Ginocchio CC, Jennemann R, Lewinski MA, Manji R, Mochon AB, Rychert JA, Westblade LF, Procop GW. PMID: 23818163.
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    99. Multicenter study evaluating the Vitek MS system for identification of medically important yeasts. J Clin Microbiol. 2013 Jul; 51(7):2267-72. Westblade LF, Jennemann R, Branda JA, Bythrow M, Ferraro MJ, Garner OB, Ginocchio CC, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Rychert JA, Sercia L, Burnham CA. PMID: 23658267; PMCID: PMC3697678.
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    100. Multicenter evaluation of the Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of Gram-positive aerobic bacteria. J Clin Microbiol. 2013 Jul; 51(7):2225-31. Rychert J, Burnham CA, Bythrow M, Garner OB, Ginocchio CC, Jennemann R, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Sercia L, Westblade LF, Ferraro MJ, Branda JA. PMID: 23658261; PMCID: PMC3697712.
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    101. N-sulfation of heparan sulfate regulates early branching events in the developing mammary gland. J Biol Chem. 2012 Dec 07; 287(50):42064-70. Bush KT, Crawford BE, Garner OB, Nigam KB, Esko JD, Nigam SK. PMID: 23060443; PMCID: PMC3516752.
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    102. Bacterial dispersal associated with speech in the setting of intravitreous injections. Arch Ophthalmol. 2011 Dec; 129(12):1551-4. Wen JC, McCannel CA, Mochon AB, Garner OB. PMID: 21825179.
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    103. Stage-dependent regulation of mammary ductal branching by heparan sulfate and HGF-cMet signaling. Dev Biol. 2011 Jul 15; 355(2):394-403. Garner OB, Bush KT, Nigam KB, Yamaguchi Y, Xu D, Esko JD, Nigam SK. PMID: 21586278; PMCID: PMC3118867.
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    104. New Delhi metallo-β-lactamase (NDM-1)-producing Klebsiella pneumoniae: case report and laboratory detection strategies. J Clin Microbiol. 2011 Apr; 49(4):1667-70. Mochon AB, Garner OB, Hindler JA, Krogstad P, Ward KW, Lewinski MA, Rasheed JK, Anderson KF, Limbago BM, Humphries RM. PMID: 21325558; PMCID: PMC3122842.
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    105. Endothelial galectin-1 binds to specific glycans on nipah virus fusion protein and inhibits maturation, mobility, and function to block syncytia formation. PLoS Pathog. 2010 Jul 15; 6(7):e1000993. Garner OB, Aguilar HC, Fulcher JA, Levroney EL, Harrison R, Wright L, Robinson LR, Aspericueta V, Panico M, Haslam SM, Morris HR, Dell A, Lee B, Baum LG. PMID: 20657665; PMCID: PMC2904771.
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    106. Loss of the heparan sulfate sulfotransferase, Ndst1, in mammary epithelial cells selectively blocks lobuloalveolar development in mice. PLoS One. 2010 May 18; 5(5):e10691. Crawford BE, Garner OB, Bishop JR, Zhang DY, Bush KT, Nigam SK, Esko JD. PMID: 20502530; PMCID: PMC2872662.
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    107. Galectin-glycan lattices regulate cell-surface glycoprotein organization and signalling. Biochem Soc Trans. 2008 Dec; 36(Pt 6):1472-7. Garner OB, Baum LG. PMID: 19021578; PMCID: PMC2811491.
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    108. Small changes in lymphocyte development and activation in mice through tissue-specific alteration of heparan sulphate. Immunology. 2008 Nov; 125(3):420-9. Garner OB, Yamaguchi Y, Esko JD, Videm V. PMID: 18479348; PMCID: PMC2669145.
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    109. Guanidinylated neomycin delivers large, bioactive cargo into cells through a heparan sulfate-dependent pathway. J Biol Chem. 2007 May 04; 282(18):13585-91. Elson-Schwab L, Garner OB, Schuksz M, Crawford BE, Esko JD, Tor Y. PMID: 17311923.
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