Jonathan P Jacobs

Title(s)Assistant Professor-in-Residence, Medicine
SchoolMedicine
ORCID ORCID Icon0000-0003-4698-0254 Additional info
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    Modulation of the Intestinal Microbiome in Obesity by a High Protein Diet
    NIH IK2CX001717Jul 1, 2018 - Jun 30, 2023
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Brain serotonin and serotonin transporter expression in male and female postnatal rat offspring in response to perturbed early life dietary exposures. Front Neurosci. 2024; 18:1363094. Ye X, Ghosh S, Shin BC, Ganguly A, Maggiotto L, Jacobs JP, Devaskar SU. PMID: 38576870; PMCID: PMC10991790.
      View in: PubMed   Mentions:
    2. Microbial and Metabolite Signatures of Stress Reactivity in Ulcerative Colitis Patients in Clinical Remission Predict Clinical Flare Risk. Inflamm Bowel Dis. 2024 Mar 01; 30(3):336-346. Jacobs JP, Sauk JS, Ahdoot AI, Liang F, Katzka W, Ryu HJ, Khandadash A, Lagishetty V, Labus JS, Naliboff BD, Mayer EA. PMID: 37650887; PMCID: PMC10906354.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    3. Modulation of Host Physiology and Pathophysiology by the Gut Microbiome. Nutrients. 2024 Jan 26; 16(3). Gray WR, Jacobs JP. PMID: 38337646; PMCID: PMC10856913.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    4. Subchronic inhalation exposure to ultrafine particulate matter alters the intestinal microbiome in various mouse models. Environ Res. 2024 Jan 18; 248:118242. Chang C, Gupta R, Sedighian F, Louie A, Gonzalez DM, Le C, Cho JM, Park SK, Castellanos J, Ting TW, Dong TS, Arias-Jayo N, Lagishetty V, Navab M, Reddy S, Sioutas C, Hsiai T, Jacobs JP, Araujo JA. PMID: 38242419.
      View in: PubMed   Mentions:    Fields:    
    5. Contact with caregivers is associated with composition of the infant gastrointestinal microbiome in the first 6 months of life. Am J Biol Anthropol. 2024 Apr; 183(4):e24858. Wiley KS, Gregg AM, Fox MM, Lagishetty V, Sandman CA, Jacobs JP, Glynn LM. PMID: 37804008; PMCID: PMC10922139.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    6. Microbiota-Dependent Upregulation of Bitter Taste Receptor Subtypes in the Mouse Large Intestine in High-Fat Diet-Induced Obesity. Nutrients. 2023 Sep 25; 15(19). Caremoli F, Huynh J, Lagishetty V, Markovic D, Braun J, Dong TS, Jacobs JP, Sternini C. PMID: 37836428; PMCID: PMC10574285.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    7. Human milk oligosaccharides modulate the intestinal microbiome of healthy adults. Sci Rep. 2023 08 31; 13(1):14308. Jacobs JP, Lee ML, Rechtman DJ, Sun AK, Autran C, Niklas V. PMID: 37652940; PMCID: PMC10471580.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    8. Fungal and Bacterial Microbiome in Sinus Mucosa of Patients with and without Chronic Rhinosinusitis. Laryngoscope. 2024 Mar; 134(3):1054-1062. Lee JT, Simpson CA, Yang HH, Suh JD, Wang MB, Lagishetty V, Liang F, Jacobs JP. PMID: 37606305.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    9. Ileal Dysbiosis Is Associated with Increased Acoustic Startle in the 22q11.2 Microdeletion Mouse Model of Schizophrenia. Nutrients. 2023 Aug 18; 15(16). Yang JC, Troutman R, Buri H, Gutta A, Situ J, Aja E, Jacobs JP. PMID: 37630824; PMCID: PMC10458577.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    10. Fecal matters: Microbial signatures distinguish clinically relevant subtypes of precancerous colorectal polyps. Cell Host Microbe. 2023 05 10; 31(5):692-694. Zhao M, Jacobs JP. PMID: 37167951.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    11. Randomized controlled pilot study assessing fructose tolerance during fructose reintroduction in non-constipated irritable bowel syndrome patients successfully treated with a low FODMAP diet. Neurogastroenterol Motil. 2023 07; 35(7):e14575. Cuff C, Lin LD, Mahurkar-Joshi S, Jacobs JP, Lagishetty V, Jaffe N, Smith J, Dong T, Sohn J, Chang L. PMID: 37052402.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    12. Role of enterocyte Enpp2 and autotaxin in regulating lipopolysaccharide levels, systemic inflammation, and atherosclerosis. J Lipid Res. 2023 05; 64(5):100370. Chattopadhyay A, Mukherjee P, Sulaiman D, Wang H, Girjalva V, Dorreh N, Jacobs JP, Delk S, Moolenaar WH, Navab M, Reddy ST, Fogelman AM. PMID: 37059333; PMCID: PMC10200992.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    13. Gastrointestinal tract involvement in systemic sclerosis: The roles of diet and the microbiome. Semin Arthritis Rheum. 2023 06; 60:152185. Nguyen AD, Andréasson K, McMahan ZH, Bukiri H, Howlett N, Lagishetty V, Lee SM, Jacobs JP, Volkmann ER. PMID: 36870237; PMCID: PMC10148899.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    14. Mixed Nuts as Healthy Snacks: Effect on Tryptophan Metabolism and Cardiovascular Risk Factors. Nutrients. 2023 Jan 21; 15(3). Yang J, Lee R, Schulz Z, Hsu A, Pai J, Yang S, Henning SM, Huang J, Jacobs JP, Heber D, Li Z. PMID: 36771274; PMCID: PMC9921623.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    15. Multi-omics profiles of the intestinal microbiome in irritable bowel syndrome and its bowel habit subtypes. Microbiome. 2023 01 10; 11(1):5. Jacobs JP, Lagishetty V, Hauer MC, Labus JS, Dong TS, Toma R, Vuyisich M, Naliboff BD, Lackner JM, Gupta A, Tillisch K, Mayer EA. PMID: 36624530; PMCID: PMC9830758.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    16. Fecal and Tissue Microbiota Are Associated with Tumor T-Cell Infiltration and Mesenteric Lymph Node Involvement in Colorectal Cancer. Nutrients. 2023 Jan 09; 15(2). Luu K, Ye JY, Lagishetty V, Liang F, Hauer M, Sedighian F, Kwaan MR, Kazanjian KK, Hecht JR, Lin AY, Jacobs JP. PMID: 36678187; PMCID: PMC9861998.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    17. Biotin Deficiency Induces Intestinal Dysbiosis Associated with an Inflammatory Bowel Disease-like Phenotype. Nutrients. 2023 Jan 04; 15(2). Yang JC, Jacobs JP, Hwang M, Sabui S, Liang F, Said HM, Skupsky J. PMID: 36678135; PMCID: PMC9866305.
      View in: PubMed   Mentions: 3     Fields:    Translation:Animals
    18. Microbial changes from bariatric surgery alters glucose-dependent insulinotropic polypeptide and prevents fatty liver disease. Gut Microbes. 2023 Jan-Dec; 15(1):2167170. Dong TS, Katzka W, Yang JC, Chang C, Arias-Jayo N, Lagishetty V, Balioukova A, Chen Y, Dutson E, Li Z, Mayer EA, Pisegna JR, Sanmiguel C, Jacobs JP. PMID: 36732495; PMCID: PMC9897796.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    19. Variation in the Early Life and Adult Intestinal Microbiome of Intra-Uterine Growth Restricted Rat Offspring Exposed to a High Fat and Fructose Diet. Nutrients. 2023 Jan 01; 15(1). Maggiotto LV, Ghosh S, Shin BC, Ganguly A, Lagishetty V, Jacobs JP, Devaskar SU. PMID: 36615874; PMCID: PMC9824396.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    20. Microbiome Therapeutics for Food Allergy. Nutrients. 2022 Dec 03; 14(23). Chernikova DA, Zhao MY, Jacobs JP. PMID: 36501184.
      View in: PubMed   Mentions: 2     Fields:    
    21. Altered Gastric Microbiota and Inflammatory Cytokine Responses in Patients with Helicobacter pylori-Negative Gastric Cancer. Nutrients. 2022 Nov 23; 14(23). Kim HN, Kim MJ, Jacobs JP, Yang HJ. PMID: 36501012; PMCID: PMC9740132.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    22. The Impact of Prebiotic, Probiotic, and Synbiotic Supplements and Yogurt Consumption on the Risk of Colorectal Neoplasia among Adults: A Systematic Review. Nutrients. 2022 Nov 21; 14(22). Kim CE, Yoon LS, Michels KB, Tranfield W, Jacobs JP, May FP. PMID: 36432622; PMCID: PMC9697560.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    23. Author Correction: Phase I trial of Bermekimab with nanoliposomal irinotecan and 5‑fuorouracil/folinic acid in advanced pancreatic ductal adenocarcinoma. Sci Rep. 2022 Nov 04; 12(1):18731. Gong J, Thomassian S, Kim S, Gresham G, Moshayedi N, Ye JY, Yang JC, Jacobs JP, Lo S, Nissen N, Gaddam S, Tighiouart M, Osipov A, Hendifar A. PMID: 36333397; PMCID: PMC9636406.
      View in: PubMed   Mentions:    Fields:    
    24. Phase I trial of Bermekimab with nanoliposomal irinotecan and 5-fluorouracil/folinic acid in advanced pancreatic ductal adenocarcinoma. Sci Rep. 2022 Sep 02; 12(1):15013. Gong J, Thomassian S, Kim S, Gresham G, Moshayedi N, Ye JY, Yang JC, Jacobs JP, Lo S, Nissen N, Gaddam S, Tighiouart M, Osipov A, Hendifar A. PMID: 36056179; PMCID: PMC9440135.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCTClinical Trials
    25. Crohn's disease in endoscopic remission, obesity, and cases of high genetic risk demonstrates overlapping shifts in the colonic mucosal-luminal interface microbiome. Genome Med. 2022 08 15; 14(1):91. Jacobs JP, Goudarzi M, Lagishetty V, Li D, Mak T, Tong M, Ruegger P, Haritunians T, Landers C, Fleshner P, Vasiliauskas E, Ippoliti A, Melmed G, Shih D, Targan S, Borneman J, Fornace AJ, McGovern DPB, Braun J. PMID: 35971134; PMCID: PMC9377146.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    26. High Perceived Stress is Associated With Increased Risk of Ulcerative Colitis Clinical Flares. Clin Gastroenterol Hepatol. 2023 Mar; 21(3):741-749.e3. Sauk JS, Ryu HJ, Labus JS, Khandadash A, Ahdoot AI, Lagishetty V, Katzka W, Wang H, Naliboff B, Jacobs JP, Mayer EA. PMID: 35952942.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    27. Modification of post-traumatic epilepsy by fecal microbiota transfer. Epilepsy Behav. 2022 09; 134:108860. Medel-Matus JS, Simpson CA, Ahdoot AI, Shin D, Sankar R, Jacobs JP, Mazarati AM. PMID: 35914438.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimals
    28. Colonic mucosal microbiota is associated with bowel habit subtype and abdominal pain in patients with irritable bowel syndrome. Am J Physiol Gastrointest Liver Physiol. 2022 08 01; 323(2):G134-G143. Choo C, Mahurkar-Joshi S, Dong TS, Lenhart A, Lagishetty V, Jacobs JP, Labus JS, Jaffe N, Mayer EA, Chang L. PMID: 35726867; PMCID: PMC9359639.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    29. Altered Gut Microbiome in Patients With Dermatomyositis. ACR Open Rheumatol. 2022 Aug; 4(8):658-670. Bae SS, Dong TS, Wang J, Lagishetty V, Katzka W, Jacobs JP, Charles-Schoeman C. PMID: 35615912; PMCID: PMC9374048.
      View in: PubMed   Mentions: 1  
    30. Susceptibility to epilepsy after traumatic brain injury is associated with preexistent gut microbiome profile. Epilepsia. 2022 07; 63(7):1835-1848. Medel-Matus JS, Lagishetty V, Santana-Gomez C, Shin D, Mowrey W, Staba RJ, Galanopoulou AS, Sankar R, Jacobs JP, Mazarati AM. PMID: 35366338; PMCID: PMC9656503.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimals
    31. Gut Microbiome Diversity and Abundance Correlate with Gray Matter Volume (GMV) in Older Adults with Depression. Int J Environ Res Public Health. 2022 02 19; 19(4). Lee SM, Milillo MM, Krause-Sorio B, Siddarth P, Kilpatrick L, Narr KL, Jacobs JP, Lavretsky H. PMID: 35206594; PMCID: PMC8872347.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    32. Disease Features and Gastrointestinal Microbial Composition in Patients with Systemic Sclerosis from Two Independent Cohorts. ACR Open Rheumatol. 2022 May; 4(5):417-425. Andréasson K, Lee SM, Lagishetty V, Wu M, Howlett N, English J, Hesselstrand R, Clements PJ, Jacobs JP, Volkmann ER. PMID: 35174673; PMCID: PMC9096523.
      View in: PubMed   Mentions: 8  
    33. Microbial and Chemical Profiles of Commercial Kombucha Products. Nutrients. 2022 Feb 05; 14(3). Yang J, Lagishetty V, Kurnia P, Henning SM, Ahdoot AI, Jacobs JP. PMID: 35277029; PMCID: PMC8838605.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    34. Pomegranate Extract Improves Colitis in IL-10 Knockout Mice Fed a High Fat High Sucrose Diet. Mol Nutr Food Res. 2022 03; 66(5):e2100730. Yang J, Germano PM, Oh S, Wang S, Wang J, Lee R, Paige H, Yang S, Henning SM, Zhong J, Jacobs JP, Li Z. PMID: 34932869.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    35. Obesity is associated with a distinct brain-gut microbiome signature that connects Prevotella and Bacteroides to the brain's reward center. Gut Microbes. 2022 Jan-Dec; 14(1):2051999. Dong TS, Guan M, Mayer EA, Stains J, Liu C, Vora P, Jacobs JP, Lagishetty V, Chang L, Barry RL, Gupta A. PMID: 35311453; PMCID: PMC8942409.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    36. Parkinson's Disease and the Gut Microbiome in Rural California. J Parkinsons Dis. 2022; 12(8):2441-2452. Zhang K, Paul KC, Jacobs JP, Chou HL, Duarte Folle A, Del Rosario I, Yu Y, Bronstein JM, Keener AM, Ritz B. PMID: 36442206; PMCID: PMC9890728.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    37. The Association Between Breast Density and Gut Microbiota Composition at 2 Years Post-Menarche: A Cross-Sectional Study of Adolescents in Santiago, Chile. Front Cell Infect Microbiol. 2021; 11:794610. Yoon LS, Jacobs JP, Hoehner J, Pereira A, Gana JC, Corvalán C, Michels KB. PMID: 34976871; PMCID: PMC8718921.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    38. The Panda-Derived Lactobacillus plantarum G201683 Alleviates the Inflammatory Response in DSS-Induced Panda Microbiota-Associated Mice. Front Immunol. 2021; 12:747045. Zhou Y, Duan L, Zeng Y, Niu L, Pu Y, Jacobs JP, Chang C, Wang J, Khalique A, Pan K, Fang J, Jing B, Zeng D, Ni X. PMID: 34956180; PMCID: PMC8692892.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    39. Cognitive behavioral therapy for irritable bowel syndrome induces bidirectional alterations in the brain-gut-microbiome axis associated with gastrointestinal symptom improvement. Microbiome. 2021 11 30; 9(1):236. Jacobs JP, Gupta A, Bhatt RR, Brawer J, Gao K, Tillisch K, Lagishetty V, Firth R, Gudleski GD, Ellingson BM, Labus JS, Naliboff BD, Lackner JM, Mayer EA. PMID: 34847963; PMCID: PMC8630837.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    40. Duodenal Microbiome and Serum Metabolites Predict Hepatocellular Carcinoma in a Multicenter Cohort of Patients with Cirrhosis. Dig Dis Sci. 2022 08; 67(8):3831-3841. Dong TS, Jacobs JP, Agopian V, Pisegna JR, Ayoub W, Durazo F, Enayati P, Sundaram V, Benhammou JN, Noureddin M, Choi G, Lagishetty V, Fiehn O, Goodman MT, Elashoff D, Hussain SK. PMID: 34799768; PMCID: PMC9287237.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    41. Oxidized phospholipids cause changes in jejunum mucus that induce dysbiosis and systemic inflammation. J Lipid Res. 2022 01; 63(1):100153. Mukherjee P, Chattopadhyay A, Grijalva V, Dorreh N, Lagishetty V, Jacobs JP, Clifford BL, Vallim T, Mack JJ, Navab M, Reddy ST, Fogelman AM. PMID: 34808192; PMCID: PMC8953663.
      View in: PubMed   Mentions: 5     Fields:    
    42. Pilot Trial of Vitamin D3 and Calcifediol in Healthy Vitamin D Deficient Adults: Does It Change the Fecal Microbiome? J Clin Endocrinol Metab. 2021 11 19; 106(12):3464-3476. Shieh A, Lee SM, Lagishetty V, Gottleib C, Jacobs JP, Adams JS. PMID: 34343292; PMCID: PMC8864755.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    43. Reporting guidelines for human microbiome research: the STORMS checklist. Nat Med. 2021 11; 27(11):1885-1892. Mirzayi C, Renson A, Genomic Standards Consortium, Massive Analysis and Quality Control Society, Zohra F, Elsafoury S, Geistlinger L, Kasselman LJ, Eckenrode K, van de Wijgert J, Loughman A, Marques FZ, MacIntyre DA, Arumugam M, Azhar R, Beghini F, Bergstrom K, Bhatt A, Bisanz JE, Braun J, Bravo HC, Buck GA, Bushman F, Casero D, Clarke G, Collado MC, Cotter PD, Cryan JF, Demmer RT, Devkota S, Elinav E, Escobar JS, Fettweis J, Finn RD, Fodor AA, Forslund S, Franke A, Furlanello C, Gilbert J, Grice E, Haibe-Kains B, Handley S, Herd P, Holmes S, Jacobs JP, Karstens L, Knight R, Knights D, Koren O, Kwon DS, Langille M, Lindsay B, McGovern D, McHardy AC, McWeeney S, Mueller NT, Nezi L, Olm M, Palm N, Pasolli E, Raes J, Redinbo MR, Rühlemann M, Balfour Sartor R, Schloss PD, Schriml L, Segal E, Shardell M, Sharpton T, Smirnova E, Sokol H, Sonnenburg JL, Srinivasan S, Thingholm LB, Turnbaugh PJ, Upadhyay V, Walls RL, Wilmes P, Yamada T, Zeller G, Zhang M, Zhao N, Zhao L, Bao W, Culhane A, Devanarayan V, Dopazo J, Fan X, Fischer M, Jones W, Kusko R, Mason CE, Mercer TR, Sansone SA, Scherer A, Shi L, Thakkar S, Tong W, Wolfinger R, Hunter C, Segata N, Huttenhower C, Dowd JB, Jones HE, Waldron L. PMID: 34789871; PMCID: PMC9105086.
      View in: PubMed   Mentions: 99     Fields:    Translation:Humans
    44. Electrical impedance tomography for non-invasive identification of fatty liver infiltrate in overweight individuals. Sci Rep. 2021 10 06; 11(1):19859. Chang CC, Huang ZY, Shih SF, Luo Y, Ko A, Cui Q, Sumner J, Cavallero S, Das S, Gao W, Sinsheimer J, Bui A, Jacobs JP, Pajukanta P, Wu H, Tai YC, Li Z, Hsiai TK. PMID: 34615918; PMCID: PMC8494919.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    45. The Ocular Microbiome Is Altered by Sampling Modality and Age. Transl Vis Sci Technol. 2021 10 04; 10(12):24. Katzka W, Dong TS, Luu K, Lagishetty V, Sedighian F, Arias-Jayo N, Jacobs JP, Hsu HY. PMID: 34661621; PMCID: PMC8525833.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    46. A bidirectional relationship between anxiety, depression and gastrointestinal symptoms in Parkinson's disease. Clin Park Relat Disord. 2021; 5:100104. Jones JD, Dominguez B, Bunch J, Uribe C, Valenzuela Y, Jacobs JP. PMID: 34430845; PMCID: PMC8368023.
      View in: PubMed   Mentions: 5  
    47. The Intestinal Microbiome Predicts Weight Loss on a Calorie-Restricted Diet and Is Associated With Improved Hepatic Steatosis. Front Nutr. 2021; 8:718661. Dong TS, Luu K, Lagishetty V, Sedighian F, Woo SL, Dreskin BW, Katzka W, Chang C, Zhou Y, Arias-Jayo N, Yang J, Ahdoot AI, Ye J, Li Z, Pisegna JR, Jacobs JP. PMID: 34307440; PMCID: PMC8295485.
      View in: PubMed   Mentions: 10  
    48. Development of the infant gut microbiome predicts temperament across the first year of life. Dev Psychopathol. 2021 Jun 10; 1-12. Fox M, Lee SM, Wiley KS, Lagishetty V, Sandman CA, Jacobs JP, Glynn LM. PMID: 34108055; PMCID: PMC9463039.
      View in: PubMed   Mentions: 7     Fields:    
    49. Unhealthy Lifestyle and Gut Dysbiosis: A Better Understanding of the Effects of Poor Diet and Nicotine on the Intestinal Microbiome. Front Endocrinol (Lausanne). 2021; 12:667066. Martinez JE, Kahana DD, Ghuman S, Wilson HP, Wilson J, Kim SCJ, Lagishetty V, Jacobs JP, Sinha-Hikim AP, Friedman TC. PMID: 34168615; PMCID: PMC8218903.
      View in: PubMed   Mentions: 41     Fields:    Translation:Humans
    50. Early life adversity predicts brain-gut alterations associated with increased stress and mood. Neurobiol Stress. 2021 Nov; 15:100348. Coley EJL, Mayer EA, Osadchiy V, Chen Z, Subramanyam V, Zhang Y, Hsiao EY, Gao K, Bhatt R, Dong T, Vora P, Naliboff B, Jacobs JP, Gupta A. PMID: 34113697; PMCID: PMC8170500.
      View in: PubMed   Mentions: 14  
    51. Effect of Exclusion Diets on Symptom Severity and the Gut Microbiota in Patients With Irritable Bowel Syndrome. Clin Gastroenterol Hepatol. 2022 03; 20(3):e465-e483. Lenhart A, Dong T, Joshi S, Jaffe N, Choo C, Liu C, Jacobs JP, Lagishetty V, Shih W, Labus JS, Gupta A, Tillisch K, Mayer EA, Chang L. PMID: 34022450; PMCID: PMC9054035.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    52. Gut microbiome profiles associated with steatosis severity in metabolic associated fatty liver disease. Hepatoma Res. 2021 May 08; 7(37). Dong TS, Luu K, Lagishetty V, Sedighian F, Woo SL, Dreskin BW, Katzka W, Chang C, Zhou Y, Arias-Jayo N, Yang J, Ahdoot AI, Ye J, Li Z, Pisegna JR, Jacobs JP. PMID: 36713356; PMCID: PMC9881202.
      View in: PubMed   Mentions: 2  
    53. Disruption of intestinal barrier and endotoxemia after traumatic brain injury: Implications for post-traumatic epilepsy. Epilepsia. 2021 06; 62(6):1472-1481. Mazarati A, Medel-Matus JS, Shin D, Jacobs JP, Sankar R. PMID: 33893636.
      View in: PubMed   Mentions: 12     Fields:    Translation:Animals
    54. The intestinal microbiota as a predictor for antidepressant treatment outcome in geriatric depression: a prospective pilot study. Int Psychogeriatr. 2022 01; 34(1):33-45. Lee SM, Dong TS, Krause-Sorio B, Siddarth P, Milillo MM, Lagishetty V, Datta T, Aguilar-Faustino Y, Jacobs JP, Lavretsky H. PMID: 33757609.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    55. Altered brain structural connectivity in patients with longstanding gut inflammation is correlated with psychological symptoms and disease duration. Neuroimage Clin. 2021; 30:102613. Turkiewicz J, Bhatt RR, Wang H, Vora P, Krause B, Sauk JS, Jacobs JP, Bernstein CN, Kornelsen J, Labus JS, Gupta A, Mayer EA. PMID: 33823388; PMCID: PMC8050027.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    56. Specimen Collection and Analysis of the Duodenal Microbiome. J Vis Exp. 2021 01 12; (167). Dreskin BW, Luu K, Dong TS, Benhammou J, Lagishetty V, Vu J, Sanford D, Durazo F, Agopian VG, Jacobs JP, Pisegna JR, Hussain SK. PMID: 33522511.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    57. Longitudinal Characterisation of the Gastrointestinal Tract Microbiome in Systemic Sclerosis. Eur Med J (Chelmsf). 2020 Dec 10; 7:110-118. Volkmann ER, Hoffmann-Vold AM, Chang YL, Lagishetty V, Clements PJ, Midtvedt Ø, Molberg Ø, Braun J, Jacobs JP. PMID: 36711108; PMCID: PMC9881192.
      View in: PubMed   Mentions: 2  
    58. Understanding the Heterogeneity of Obesity and the Relationship to the Brain-Gut Axis. Nutrients. 2020 Nov 30; 12(12). Hung TKW, Dong TS, Chen Z, Elashoff D, Sinsheimer JS, Jacobs JP, Lagishetty V, Vora P, Stains J, Mayer EA, Gupta A. PMID: 33266058; PMCID: PMC7761087.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    59. Shifts in microbial diversity, composition, and functionality in the gut and genital microbiome during a natural SIV infection in vervet monkeys. Microbiome. 2020 11 06; 8(1):154. Jasinska AJ, Dong TS, Lagishetty V, Katzka W, Jacobs JP, Schmitt CA, Cramer JD, Ma D, Coetzer WG, Grobler JP, Turner TR, Freimer N, Pandrea I, Apetrei C. PMID: 33158452; PMCID: PMC7648414.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    60. Analysis of brain networks and fecal metabolites reveals brain-gut alterations in premenopausal females with irritable bowel syndrome. Transl Psychiatry. 2020 11 02; 10(1):367. Osadchiy V, Mayer EA, Gao K, Labus JS, Naliboff B, Tillisch K, Chang L, Jacobs JP, Hsiao EY, Gupta A. PMID: 33139708; PMCID: PMC7608552.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    61. Proximal colon-derived O-glycosylated mucus encapsulates and modulates the microbiota. Science. 2020 10 23; 370(6515):467-472. Bergstrom K, Shan X, Casero D, Batushansky A, Lagishetty V, Jacobs JP, Hoover C, Kondo Y, Shao B, Gao L, Zandberg W, Noyovitz B, McDaniel JM, Gibson DL, Pakpour S, Kazemian N, McGee S, Houchen CW, Rao CV, Griffin TM, Sonnenburg JL, McEver RP, Braun J, Xia L. PMID: 33093110; PMCID: PMC8132455.
      View in: PubMed   Mentions: 65     Fields:    Translation:AnimalsCells
    62. A High Protein Calorie Restriction Diet Alters the Gut Microbiome in Obesity. Nutrients. 2020 Oct 21; 12(10). Dong TS, Luu K, Lagishetty V, Sedighian F, Woo SL, Dreskin BW, Katzka W, Chang C, Zhou Y, Arias-Jayo N, Yang J, Ahdoot A, Li Z, Pisegna JR, Jacobs JP. PMID: 33096810; PMCID: PMC7590138.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    63. Improvement in Uncontrolled Eating Behavior after Laparoscopic Sleeve Gastrectomy Is Associated with Alterations in the Brain-Gut-Microbiome Axis in Obese Women. Nutrients. 2020 Sep 24; 12(10). Dong TS, Gupta A, Jacobs JP, Lagishetty V, Gallagher E, Bhatt RR, Vora P, Osadchiy V, Stains J, Balioukova A, Chen Y, Dutson E, Mayer EA, Sanmiguel C. PMID: 32987837; PMCID: PMC7599899.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    64. A Distinct Brain-Gut-Microbiome Profile Exists for Females with Obesity and Food Addiction. Obesity (Silver Spring). 2020 08; 28(8):1477-1486. Dong TS, Mayer EA, Osadchiy V, Chang C, Katzka W, Lagishetty V, Gonzalez K, Kalani A, Stains J, Jacobs JP, Longo VD, Gupta A. PMID: 32935533; PMCID: PMC7494955.
      View in: PubMed   Mentions: 25     Fields:    Translation:Humans
    65. Dietary Protein, Fiber and Coffee Are Associated with Small Intestine Microbiome Composition and Diversity in Patients with Liver Cirrhosis. Nutrients. 2020 May 13; 12(5). Hussain SK, Dong TS, Agopian V, Pisegna JR, Durazo FA, Enayati P, Sundaram V, Benhammou JN, Noureddin M, Choi G, Ayoub WS, Lagishetty V, Elashoff D, Goodman MT, Jacobs JP. PMID: 32414035; PMCID: PMC7285216.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    66. A Microbial Signature Identifies Advanced Fibrosis in Patients with Chronic Liver Disease Mainly Due to NAFLD. Sci Rep. 2020 02 17; 10(1):2771. Dong TS, Katzka W, Lagishetty V, Luu K, Hauer M, Pisegna J, Jacobs JP. PMID: 32066758; PMCID: PMC7026172.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    67. Gastrointestinal symptoms are predictive of trajectories of cognitive functioning in de novo Parkinson's disease. Parkinsonism Relat Disord. 2020 03; 72:7-12. Jones JD, Rahmani E, Garcia E, Jacobs JP. PMID: 32058266; PMCID: PMC7179075.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    68. Metformin alters the duodenal microbiome and decreases the incidence of pancreatic ductal adenocarcinoma promoted by diet-induced obesity. Am J Physiol Gastrointest Liver Physiol. 2019 12 01; 317(6):G763-G772. Dong TS, Chang HH, Hauer M, Lagishetty V, Katzka W, Rozengurt E, Jacobs JP, Eibl G. PMID: 31545922; PMCID: PMC6962494.
      View in: PubMed   Mentions: 16     Fields:    Translation:Animals
    69. Microbial Profiles of Cirrhosis in the Human Small Intestine. Curr Gastroenterol Rep. 2019 Aug 23; 21(10):50. Dong TS, Jacobs JP, Hussain SK. PMID: 31444636; PMCID: PMC7292805.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    70. Dietary Supplementation with Omega-3 Polyunsaturated Fatty Acids Reduces Opioid-Seeking Behaviors and Alters the Gut Microbiome. Nutrients. 2019 Aug 14; 11(8). Hakimian JK, Dong TS, Barahona JA, Lagishetty V, Tiwari S, Azani D, Barrera M, Lee S, Severino AL, Mittal N, Cahill CM, Jacobs JP, Walwyn WM. PMID: 31416242; PMCID: PMC6723154.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    71. Psychobiotics: Shaping the Mind With Gut Bacteria. Am J Gastroenterol. 2019 07; 114(7):1034-1035. Jacobs JP, Mayer EA. PMID: 31268916.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    72. Nonalcoholic fatty liver disease and the gut microbiome: Are bacteria responsible for fatty liver? Exp Biol Med (Maywood). 2019 04; 244(6):408-418. Dong TS, Jacobs JP. PMID: 30871368; PMCID: PMC6547005.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimals
    73. Microbiotas from Humans with Inflammatory Bowel Disease Alter the Balance of Gut Th17 and RORγt+ Regulatory T Cells and Exacerbate Colitis in Mice. Immunity. 2019 01 15; 50(1):212-224.e4. Britton GJ, Contijoch EJ, Mogno I, Vennaro OH, Llewellyn SR, Ng R, Li Z, Mortha A, Merad M, Das A, Gevers D, McGovern DPB, Singh N, Braun J, Jacobs JP, Clemente JC, Grinspan A, Sands BE, Colombel JF, Dubinsky MC, Faith JJ. PMID: 30650377; PMCID: PMC6512335.
      View in: PubMed   Mentions: 194     Fields:    Translation:HumansAnimalsCells
    74. Microbiome and bile acid profiles in duodenal aspirates from patients with liver cirrhosis: The Microbiome, Microbial Markers and Liver Disease Study. Hepatol Res. 2018 Dec; 48(13):1108-1117. Jacobs JP, Dong TS, Agopian V, Lagishetty V, Sundaram V, Noureddin M, Ayoub WS, Durazo F, Benhammou J, Enayati P, Elashoff D, Goodman MT, Pisegna J, Hussain S. PMID: 29923681; PMCID: PMC6334634.
      View in: PubMed   Mentions: 16  
    75. Inflammation-independent TL1A-mediated intestinal fibrosis is dependent on the gut microbiome. Mucosal Immunol. 2018 09; 11(5):1466-1476. Jacob N, Jacobs JP, Kumagai K, Ha CWY, Kanazawa Y, Lagishetty V, Altmayer K, Hamill AM, Von Arx A, Sartor RB, Devkota S, Braun J, Michelsen KS, Targan SR, Shih DQ. PMID: 29988118; PMCID: PMC6162160.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansAnimalsCells
    76. Ceragenin CSA13 Reduces Clostridium difficile Infection in Mice by Modulating the Intestinal Microbiome and Metabolites. Gastroenterology. 2018 05; 154(6):1737-1750. Wang J, Ghali S, Xu C, Mussatto CC, Ortiz C, Lee EC, Tran DH, Jacobs JP, Lagishetty V, Faull KF, Moller T, Rossetti M, Chen X, Koon HW. PMID: 29360463; PMCID: PMC5927842.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    77. CSA13 inhibits colitis-associated intestinal fibrosis via a formyl peptide receptor like-1 mediated HMG-CoA reductase pathway. Sci Rep. 2017 11 27; 7(1):16351. Xu C, Ghali S, Wang J, Shih DQ, Ortiz C, Mussatto CC, Lee EC, Tran DH, Jacobs JP, Lagishetty V, Fleshner P, Robbins L, Vu M, Hing TC, McGovern DPB, Koon HW. PMID: 29180648; PMCID: PMC5703874.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    78. High-protein diet improves sensitivity to cholecystokinin and shifts the cecal microbiome without altering brain inflammation in diet-induced obesity in rats. Am J Physiol Regul Integr Comp Physiol. 2017 Oct 01; 313(4):R473-R486. Wang L, Jacobs JP, Lagishetty V, Yuan PQ, Wu SV, Million M, Reeve JR, Pisegna JR, Taché Y. PMID: 28724546; PMCID: PMC5668619.
      View in: PubMed   Mentions: 12     Fields:    Translation:Animals
    79. Systemic sclerosis is associated with specific alterations in gastrointestinal microbiota in two independent cohorts. BMJ Open Gastroenterol. 2017; 4(1):e000134. Volkmann ER, Hoffmann-Vold AM, Chang YL, Jacobs JP, Tillisch K, Mayer EA, Clements PJ, Hov JR, Kummen M, Midtvedt Ø, Lagishetty V, Chang L, Labus JS, Molberg Ø, Braun J. PMID: 28761687; PMCID: PMC5508636.
      View in: PubMed   Mentions: 43     Fields:    
    80. Chronic Early-life Stress in Rat Pups Alters Basal Corticosterone, Intestinal Permeability, and Fecal Microbiota at Weaning: Influence of Sex. J Neurogastroenterol Motil. 2017 Jan 30; 23(1):135-143. Moussaoui N, Jacobs JP, Larauche M, Biraud M, Million M, Mayer E, Taché Y. PMID: 27829577; PMCID: PMC5216644.
      View in: PubMed   Mentions: 53  
    81. Microbial, metabolomic, and immunologic dynamics in a relapsing genetic mouse model of colitis induced by T-synthase deficiency. Gut Microbes. 2017 01 02; 8(1):1-16. Jacobs JP, Lin L, Goudarzi M, Ruegger P, McGovern DP, Fornace AJ, Borneman J, Xia L, Braun J. PMID: 27874308; PMCID: PMC5341916.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansAnimalsCells
    82. An Integrated Multi-Omic Approach to Assess Radiation Injury on the Host-Microbiome Axis. Radiat Res. 2016 09; 186(3):219-34. Goudarzi M, Mak TD, Jacobs JP, Moon BH, Strawn SJ, Braun J, Brenner DJ, Fornace AJ, Li HH. PMID: 27512828; PMCID: PMC5304359.
      View in: PubMed   Mentions: 36     Fields:    Translation:AnimalsPHPublic Health
    83. A Pleiotropic Missense Variant in SLC39A8 Is Associated With Crohn's Disease and Human Gut Microbiome Composition. Gastroenterology. 2016 10; 151(4):724-32. Li D, Achkar JP, Haritunians T, Jacobs JP, Hui KY, D'Amato M, Brand S, Radford-Smith G, Halfvarson J, Niess JH, Kugathasan S, Büning C, Schumm LP, Klei L, Ananthakrishnan A, Aumais G, Baidoo L, Dubinsky M, Fiocchi C, Glas J, Milgrom R, Proctor DD, Regueiro M, Simms LA, Stempak JM, Targan SR, Törkvist L, Sharma Y, Devlin B, Borneman J, Hakonarson H, Xavier RJ, Daly M, Brant SR, Rioux JD, Silverberg MS, Cho JH, Braun J, McGovern DP, Duerr RH. PMID: 27492617; PMCID: PMC5037008.
      View in: PubMed   Mentions: 61     Fields:    Translation:Humans
    84. A Disease-Associated Microbial and Metabolomics State in Relatives of Pediatric Inflammatory Bowel Disease Patients. Cell Mol Gastroenterol Hepatol. 2016 Nov; 2(6):750-766. Jacobs JP, Goudarzi M, Singh N, Tong M, McHardy IH, Ruegger P, Asadourian M, Moon BH, Ayson A, Borneman J, McGovern DP, Fornace AJ, Braun J, Dubinsky M. PMID: 28174747; PMCID: PMC5247316.
      View in: PubMed   Mentions: 102     Fields:    
    85. Association of Systemic Sclerosis With a Unique Colonic Microbial Consortium. Arthritis Rheumatol. 2016 06; 68(6):1483-92. Volkmann ER, Chang YL, Barroso N, Furst DE, Clements PJ, Gorn AH, Roth BE, Conklin JL, Getzug T, Borneman J, McGovern DP, Tong M, Jacobs JP, Braun J. PMID: 26749064; PMCID: PMC5561666.
      View in: PubMed   Mentions: 51     Fields:    Translation:Humans
    86. Sampling of intestinal microbiota and targeted amplification of bacterial 16S rRNA genes for microbial ecologic analysis. Curr Protoc Immunol. 2014 Nov 03; 107:7.41.1-7.41.11. Tong M, Jacobs JP, McHardy IH, Braun J. PMID: 25367129; PMCID: PMC4457454.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansAnimals
    87. Immune and genetic gardening of the intestinal microbiome. FEBS Lett. 2014 Nov 17; 588(22):4102-11. Jacobs JP, Braun J. PMID: 24613921; PMCID: PMC4156569.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansAnimals
    88. Deficiency of CXCR2, but not other chemokine receptors, attenuates autoantibody-mediated arthritis in a murine model. Arthritis Rheum. 2010 Jul; 62(7):1921-32. Jacobs JP, Ortiz-Lopez A, Campbell JJ, Gerard CJ, Mathis D, Benoist C. PMID: 20506316; PMCID: PMC2994550.
      View in: PubMed   Mentions: 58     Fields:    Translation:AnimalsCells
    89. IL-17-producing T cells can augment autoantibody-induced arthritis. Proc Natl Acad Sci U S A. 2009 Dec 22; 106(51):21789-94. Jacobs JP, Wu HJ, Benoist C, Mathis D. PMID: 19955422; PMCID: PMC2799826.
      View in: PubMed   Mentions: 36     Fields:    Translation:AnimalsCells
    90. Circulating C3 is necessary and sufficient for induction of autoantibody-mediated arthritis in a mouse model. Arthritis Rheum. 2007 Sep; 56(9):2968-74. Monach PA, Verschoor A, Jacobs JP, Carroll MC, Wagers AJ, Benoist C, Mathis D. PMID: 17763447; PMCID: PMC2559465.
      View in: PubMed   Mentions: 13     Fields:    Translation:Animals
    91. Lack of requirement of osteopontin for inflammation, bone erosion, and cartilage damage in the K/BxN model of autoantibody-mediated arthritis. Arthritis Rheum. 2004 Aug; 50(8):2685-94. Jacobs JP, Pettit AR, Shinohara ML, Jansson M, Cantor H, Gravallese EM, Mathis D, Benoist C. PMID: 15334485.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    92. Management of glucocorticoid-induced osteoporosis in patients with rheumatoid arthritis: rates and predictors of care in an academic rheumatology practice. Arthritis Rheum. 2002 Dec; 46(12):3136-42. Solomon DH, Katz JN, Jacobs JP, La Tourette AM, Coblyn J. PMID: 12483716.
      View in: PubMed   Mentions: 39     Fields:    Translation:Humans
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